CV884931

Overview
NameCV884931
Unique NameCV884931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884931_ssr223 microsatellite CV884931_ssr223:223..234. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1684 contig Csv1_Contig1684:28..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 431.024 bits (1107), Expect = 4.116e-120
Identity = 211/262 (80.53%), Postives = 232/262 (88.55%), Query Frame = 3
Query:   81 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHI 866
            IT+SKLRGK               NWLQVGDDLNHRNL+DLAK++ ++LLLRM QRNLVV+SSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQD+VFTVYGEHWRKMRRIMTVPFFTNKVVQQ RF WE EAA VV+DVKK+ +A+ NGIV+RRRLQLMMYN MYRIMFDRRFES++DPLF +LKALNGERSRLAQSFEYNYGDFIPILRPFL+GYLK+CKEVK+RRLQLFKDYFV+ERKKL STKS  NE LKCAIDHI
Sbjct:   21 ITISKLRGKPFKLPPGPFPVPVFGNWLQVGDDLNHRNLTDLAKRFAEILLLRMEQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDIVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVKKNSKASVNGIVIRRRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKVCKEVKDRRLQLFKDYFVDERKKLGSTKSTYNEGLKCAIDHI 282          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 423.32 bits (1087), Expect = 8.582e-118
Identity = 212/262 (80.92%), Postives = 231/262 (88.17%), Query Frame = 3
Query:   81 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHI 866
            IT+SKLRGKR              NWLQVGDDLNHRNL+DLAK++GD+ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYG    +MRRIMTVPFFTNKVVQQ RF WE EA  VV+DVKK+PEA ++GIVLRRRLQLMMYN MYRIMFDRRFES++DPLF +LKALNGERSRLAQSFEYNYGDFIPILRPFL+GYLK+CKEVK+RRLQLFKDYFV+ERKKL STKS +NE LKCAIDHI
Sbjct:   21 ITISKLRGKRFKLPPGPIPVPVFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGT-LAEMRRIMTVPFFTNKVVQQYRFGWEFEAQSVVDDVKKNPEACSSGIVLRRRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKLCKEVKDRRLQLFKDYFVDERKKLGSTKSTTNEGLKCAIDHI 281          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 421.394 bits (1082), Expect = 3.261e-117
Identity = 208/260 (80.00%), Postives = 227/260 (87.31%), Query Frame = 3
Query:   87 VSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHI 866
            +SKLRGK+              NWLQVGDDLNHRNL D AKK+GD+ LLRMGQRNLVVVSSPD  KEVL TQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R  WE EAA VVEDVKK+P++AT GIVLR+RLQLMMYNNM+RIMFDRRFES+DDPLF RLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKIC++VK+RR+ LFK YFV+ERK++AS+K   +E LKCAIDHI
Sbjct:   23 ISKLRGKKLKLPPGPIPIPIFGNWLQVGDDLNHRNLVDYAKKFGDLFLLRMGQRNLVVVSSPDLTKEVLLTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQNREGWEFEAASVVEDVKKNPDSATKGIVLRKRLQLMMYNNMFRIMFDRRFESEDDPLFLRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKDRRIALFKKYFVDERKQIASSKPTGSEGLKCAIDHI 282          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 419.083 bits (1076), Expect = 1.619e-116
Identity = 207/263 (78.71%), Postives = 228/263 (86.69%), Query Frame = 3
Query:   81 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKS-MSNESLKCAIDHI 866
            +T+SKLRGKR               WLQVGDDLNHRNL+D AK++G++ LLRMGQRNLVVVSSP+ AKEVLHTQ VEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE EA  VV DVK + EA+  GIV+R+RLQLMMYN MYRIMFDRRFES++DPLF +LKALNGERSRLAQSFEYNYGDFIPILRPFL+GYLK+CKEVK+RRLQLFKDYFV+ERKKL STKS  SN+ LKCAIDHI
Sbjct:   21 VTISKLRGKRFKLPPGPIPVPIFGYWLQVGDDLNHRNLTDYAKRFGEIFLLRMGQRNLVVVSSPELAKEVLHTQCVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWESEAESVVNDVKNNAEASVGGIVIRKRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKVCKEVKDRRLQLFKDYFVDERKKLESTKSTTSNDGLKCAIDHI 283          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.034e-18
Identity = 63/208 (30.29%), Postives = 104/208 (50.00%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNR-LKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICKEVKERRLQLFKDYFVEE 800
            HR L +LA+KYG +L LR G    VVVSS + AK  L T  + F SR    V   F    +D+ F+ YG+HWRKMR+I  +   T+K ++  +   ++E + ++  + ++ E+    + + + +   + N ++RI+  ++F   D     +    L  E S    S   N GDFIP L    L+G  +  K+    R   F +  ++E
Sbjct:   63 HRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANILWRILARKKFSDNDLGADGKGFADLVVEVSIAVGSL--NIGDFIPYLDCLDLQGIKRALKKA-NARFDAFAEKMIDE 267          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.722e-17
Identity = 51/177 (28.81%), Postives = 98/177 (55.37%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPIL 713
            HR+L  L+KKYG V+LL +G + ++V SS +  ++++ T  + + +R ++ + D      +D+ F+ +GE+WR++R I  +   +NK VQ  R   E+E + ++E +K+   ++++   LR     + YN + R+   +++  + D      KA   +   L  +F  N GD+IP L
Sbjct:   46 HRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFCWLAYNIINRVALGKKYNDEID-----AKATLDKFVELLGTF--NVGDYIPCL 215          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.011e-17
Identity = 70/214 (32.71%), Postives = 105/214 (49.07%), Query Frame = 3
Query:  204 AKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKD---PEAATNGIVLRRRLQLMMYNNMYRIMFDRRF---ESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKS 827
            A+ YG ++ + +G    VVVSS + AKEVL     +   R RN   + F+  GQD+++  YG H+ K+R++ T+  FT K ++  R   EDE   +VE V +D   PE    G+ LR+ L  + +NN+ R+ F +RF   E   D      KA+     +L  S   +  + IP LR       K   E   RR +L +   + E   LA  KS
Sbjct:   55 AQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAEGVVDEQGLEFKAIVSNGLKLGASL--SIAEHIPWLRWMFPADEKAFAEHGARRDRLTR--AIMEEHTLARQKS 264          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 5.011e-17
Identity = 54/162 (33.33%), Postives = 87/162 (53.70%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD--PLFNRLKALNGERS 662
            HR+L  L+ +YG ++LL  G   ++VVSS D AK+VL T    F SR R+ +FD     G+D+    YGE+WR+M+ +  +  F+NK+V+  R   ++E + ++E ++       N   L   L  +  N + R+   R++  + D   L  RL  L GE S
Sbjct:   54 HRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASRPRSKIFDKIFYNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMIEKIRISSSLRIN---LSEILVNLTNNVICRVALGRKYGGKTDFKDLMKRLTRLLGEFS 212          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.116e-16
Identity = 47/146 (32.19%), Postives = 83/146 (56.85%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD 620
            HR L DLAKKYG ++ L++G+   ++VSS ++AKEV+ T  V F SR R++  DI      D+ F+ YG++WR++R+I  V   + K VQ      E+E   +++ +  +  +  N   L + +  +++    R  F +R+  Q++
Sbjct:   41 HRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEEGSVVN---LSQAIDSLIFTITSRSAFGKRYMEQEE 183          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.458e-16
Identity = 67/226 (29.65%), Postives = 117/226 (51.77%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMY--RIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIP---ILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESL 845
            HR L DLAKKYG ++ L++G+ + VVV+SPD AKEVL T  + F SR + +  DI      D+ F+ YGE+W++MR+I      + K V+       DE  R+++ ++    ++++G ++  + +++ + +    R  F +  + QD  +F +L     E  RLA+ F+    D  P    L  F R   K+      R++    +  + E KK  +T+   + +L
Sbjct:   53 HRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQ---SSSSSGELVNFKERVIWFTSSMTCRSAFGQLPKEQD--MFIKLIR---EVIRLAEGFD--VADIFPSYKFLHVFGRAKRKLLN--VHRKVDAIVEDVINEHKKNFATRKNDDHAL 266          
The following BLAST results are available for this feature:
BLAST of CV884931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
TCMO_PEA4.116e-12080.53Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_CICAR8.582e-11880.92Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_ARATH3.261e-11780.00Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
TCMO_MEDSA1.619e-11678.71Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
C75A1_PINTA2.034e-1830.29Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71A3_SOLME1.722e-1728.81Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C98A3_ARATH5.011e-1732.71Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C71AO_ARATH5.011e-1733.33Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71DB_LOTJA1.116e-1632.19Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71D6_SOLCH1.458e-1629.65Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884931 ID=CV884931; Name=CV884931; organism=Citrus sinensis; type=EST; length=867bp
TTCATTACGTTTATCGTAACATGGATCTCCTCTTGCTGGAAAAGACGCTT
TTAGCCCTCTTCGCCGCCGTTGTTGTCGCCATTACCGTCTCTAAACTCCG
CGGAAAGCGCTTCAAGCTTCCCCCCGGCCCCCTCCCCGTCCCCGTCTTCG
GCAACTGGCTCCAGGTCGGCGATGACTTGAACCATCGGAACCTCTCCGAC
TTAGCCAAGAAATATGGAGATGTCCTCCTCCTCCGCATGGGCCAGCGCAA
CCTCGTCGTCGTCTCGTCGCCGGACCACGCCAAGGAGGTCCTGCACACGC
AGGGAGTGGAGTTCGGATCACGAACGAGGAACGTCGTGTTCGATATCTTC
ACTGGGAAGGGTCAGGACATGGTGTTCACAGTGTACGGCGAGCACTGGCG
AAAGATGCGGAGGATCATGACCGTCCCTTTCTTCACGAACAAAGTGGTTC
AGCAGCAGCGGTTTAATTGGGAAGACGAGGCCGCTAGAGTTGTTGAGGAT
GTTAAGAAGGACCCCGAGGCGGCGACCAATGGGATCGTCTTGAGGAGGCG
GCTGCAGCTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAA
GATTCGAGAGTCAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAAT
GGTGAGAGGAGTCGGTTGGCCCAGAGCTTTGAGTACAATTACGGTGATTT
TATTCCCATTTTGAGACCTTTCTTGAGAGGCTACTTGAAGATTTGTAAGG
AAGTAAAAGAAAGGAGACTCCAGCTCTTCAAGGACTACTTTGTTGAGGAG
AGAAAGAAATTGGCAAGCACGAAGAGCATGAGTAATGAAAGCTTGAAATG
CGCAATCGATCATATTT
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