CV884931

Overview
NameCV884931
Unique NameCV884931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884931_ssr223 microsatellite CV884931_ssr223:223..234. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1684 contig Csv1_Contig1684:28..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.248e-16
Identity = 56/208 (26.92%), Postives = 108/208 (51.92%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILR--PFLRGYLKICKEVKERRLQLFKDYFVEE 800
            HR L  L+ +YG ++LL  G+  ++VVS PD   +++ T  ++F +R ++   +IF   G+D++F  YGE W+ M+ +  V    NK+V+    N  +E  +V+ +  ++  ++++ + L + L  +  + + RI   R++  ++  +   +K L    S     F   +GDFIP L    ++ G     K++   +L  F D  V+E
Sbjct:   54 HRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFE-NLREEEIKVMTEKLEEASSSSSSVNLSKLLMTLTNDIICRITLGRKYNEEEGGI--DIKNLVMTSSEFFGKF--FFGDFIPSLAWIDWISGIDDKMKDI-NNKLDCFLDSMVQE 255          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.242e-16
Identity = 50/160 (31.25%), Postives = 87/160 (54.37%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD--PLFNRLKALNGE 656
            HR+L  L+ +YG ++LLR G   ++VVSS D A+++L T    F SR R+ +F+    + +D+    YGE+WR+M+ +  +   TNK+V+  R   ++E + ++E ++K      N   L   L  +  + + R+   R++  + D   L  RL  L GE
Sbjct:   53 HRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRPRSKIFEKIFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKIQKSSSLQVN---LSELLGSLTNDVISRVALGRKYSDETDFKELMKRLTKLLGE 209          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.242e-16
Identity = 58/207 (28.02%), Postives = 103/207 (49.76%), Query Frame = 3
Query:   99 RGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD--PLFNRLKALNGERSRLAQSFEYNYGDFIPIL 713
            RGK+              N  Q+G    HR+L  L+ +YG ++LL +G+  ++VVSS D A+++L T    F SR R+ +F+     G+D+ F  YGE+WR+++ +  +   +NK+V   R   ++E + ++E ++K      N   +   L  +  + + RI   R++  + D   L  RL  L G         E++ G ++P L
Sbjct:   26 RGKKSNTPRSPPRLPLIGNLHQLGHH-PHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASRPRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQKSSSLQVN---VSELLGSLTNDVISRIALGRKYSGETDSKELMKRLMMLMG---------EFSVGTYVPWL 219          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.540e-16
Identity = 58/208 (27.88%), Postives = 113/208 (54.33%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKE--RRLQLFKDYFVEE 800
            HR+L  L++KYG V+LL +G + ++V SS D A+++L T    + +R +  + D      +D+ F+ +GE+W ++R I+ +   +NK VQ  R   E+E A ++E +++  +A+   I L   L  +  N   R+   R ++ ++  +    K +  +  +L  +F  N GD+IP L+ ++     +  +V++  ++L  F D  +EE
Sbjct:   57 HRSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATRPKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCDASV--INLGEHLCFLTNNITSRVALGRTYDERESGI--DAKDILEQFLQLLDTF--NVGDYIPWLK-WVNKITGLDTKVEKIAKKLDTFLDSVIEE 257          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.236e-16
Identity = 65/222 (29.28%), Postives = 119/222 (53.60%), Query Frame = 3
Query:  177 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMY--RIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEV--KERRL-QLFKDYFVEERKKLASTKS 827
            L HR L DLA+KYG ++ L++G+ + VVV+SP+ AK+VL T  + F SR + +  DI     +D+ F+ YG++WR+MR+I  +   + K V+       DE  R+++ ++      T+G ++    +++ + +    R  F +  + Q+  +F +L     E   LA+ F+    D  P  + FL G+    +++    R++  + +D   E +K LA+ KS
Sbjct:   51 LPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQ---PCFTSGELVNFTERIIWFTSSMTCRSAFGQVLKEQE--VFIKLIR---EVISLAEGFD--VADIFPSYK-FLHGFGGAKQKLLNAHRKVDSIVEDVIKEHKKNLATRKS 261          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.236e-16
Identity = 48/142 (33.80%), Postives = 82/142 (57.75%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDP-EAATNGIVLRRRLQLMMYNNMYRIMFDRRF 605
            H++L  ++++YG V+LL  G   +++VSS + A+EVL T  +E  SR + V   +FT   +D+ F  YGE+WR+MR+I     F+ K ++  R+  EDE+  +V  V K   E  T+ + LR+ +     + + R+ F + F
Sbjct:   49 HKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETPTSSVNLRKVIFTFAASIICRLSFGQNF 190          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 9.450e-16
Identity = 59/212 (27.83%), Postives = 110/212 (51.89%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMY-RIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILR--PFLRGYLKICKEVKERRLQLFKDYFVEERKK 809
            HR+L  L+ +YG ++LL  G+  +++VSS D A +V+ T  +   +R +  V D     G+D+ F  YGE+WR+M+ I       NK+V+      E+E  R++E ++K   +++   V   ++ + + N++  R+   R++  + D     +   N  R+  A   E+  G++IP L     +RG L    EV ++R   F +  V+E ++
Sbjct:   53 HRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVNLSQILMTLTNDIICRVALGRKYSGKKD----GIDVENIVRTFAALLGEFPVGEYIPSLSWIDRIRG-LDHKMEVVDKRFDEFLERVVKEHEE 259          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.234e-15
Identity = 61/217 (28.11%), Postives = 114/217 (52.53%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILR--PFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKS 827
            HR+L  L+ +YG ++LL  G+  ++VVSS + A+EVL T   +F +R R+         G+D+VF  YGE+WR+M+ +  +   TNK+V+      EDE   ++E ++K   ++++  +    L + + +++   +   R  S+D+   +  K +   R  +    E+  G+++PIL     +RG+    KEV  R      D  V+E  + ++ K+
Sbjct:   54 HRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSENL--SELFITLPSDVTSRVALGRKHSEDETARDLKKRV---RQIMELLGEFPIGEYVPILAWIDGIRGFNNKIKEV-SRGFSDLMDKVVQEHLEASNDKA 264          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.105e-15
Identity = 49/114 (42.98%), Postives = 68/114 (59.65%), Query Frame = 3
Query:  192 LSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNG 533
            L +LA KYG V+ LRMGQ + VVVSSP  A+EVL  + V F SR   +V +IF     D+ F  YG +WR +R++ TV   + KVV+Q      DE   +V ++K    AA++G
Sbjct:   84 LRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIK----AASSG 193          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.105e-15
Identity = 58/179 (32.40%), Postives = 85/179 (47.49%), Query Frame = 3
Query:  171 DDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIP 707
            D L HR L++LAKKYG +  LRMG  ++  VSSP+ A++VL  Q   F +R   +     T    DM F  YG  WR+MR++  +  F+ K  +    +  DE  ++V  V  +     N   +  ++  +  N  YR  F    E   D     L+    E S+L  +F  N  DFIP
Sbjct:   57 DQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWA-SVRDEVDKMVRSVSCNVGKPIN---VGEQIFALTRNITYRAAFGSACEKGQDEFIRILQ----EFSKLFGAF--NVADFIP 225          
The following BLAST results are available for this feature:
BLAST of CV884931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
C71AR_ARATH3.248e-1626.92Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C71AM_ARATH4.242e-1631.25Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH4.242e-1628.02Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71A4_SOLME5.540e-1627.88Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71D7_SOLCH7.236e-1629.28Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71B5_ARATH7.236e-1633.80Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71AK_ARATH9.450e-1627.83Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH1.234e-1528.11Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C99A2_ORYSJ2.105e-1542.98Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C84A1_ARATH2.105e-1532.40Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884931 ID=CV884931; Name=CV884931; organism=Citrus sinensis; type=EST; length=867bp
TTCATTACGTTTATCGTAACATGGATCTCCTCTTGCTGGAAAAGACGCTT
TTAGCCCTCTTCGCCGCCGTTGTTGTCGCCATTACCGTCTCTAAACTCCG
CGGAAAGCGCTTCAAGCTTCCCCCCGGCCCCCTCCCCGTCCCCGTCTTCG
GCAACTGGCTCCAGGTCGGCGATGACTTGAACCATCGGAACCTCTCCGAC
TTAGCCAAGAAATATGGAGATGTCCTCCTCCTCCGCATGGGCCAGCGCAA
CCTCGTCGTCGTCTCGTCGCCGGACCACGCCAAGGAGGTCCTGCACACGC
AGGGAGTGGAGTTCGGATCACGAACGAGGAACGTCGTGTTCGATATCTTC
ACTGGGAAGGGTCAGGACATGGTGTTCACAGTGTACGGCGAGCACTGGCG
AAAGATGCGGAGGATCATGACCGTCCCTTTCTTCACGAACAAAGTGGTTC
AGCAGCAGCGGTTTAATTGGGAAGACGAGGCCGCTAGAGTTGTTGAGGAT
GTTAAGAAGGACCCCGAGGCGGCGACCAATGGGATCGTCTTGAGGAGGCG
GCTGCAGCTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAA
GATTCGAGAGTCAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAAT
GGTGAGAGGAGTCGGTTGGCCCAGAGCTTTGAGTACAATTACGGTGATTT
TATTCCCATTTTGAGACCTTTCTTGAGAGGCTACTTGAAGATTTGTAAGG
AAGTAAAAGAAAGGAGACTCCAGCTCTTCAAGGACTACTTTGTTGAGGAG
AGAAAGAAATTGGCAAGCACGAAGAGCATGAGTAATGAAAGCTTGAAATG
CGCAATCGATCATATTT
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