CV884931

Overview
NameCV884931
Unique NameCV884931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884931_ssr223 microsatellite CV884931_ssr223:223..234. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1684 contig Csv1_Contig1684:28..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.105e-15
Identity = 57/216 (26.39%), Postives = 107/216 (49.54%), Query Frame = 3
Query:   93 KLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILR--PFLRGY 734
            +L GK+              N  Q+G    HR+L DL+++YG ++LL +G+  +++VSS D A+E+L T    F +R R+ +        +D+    YGE+WR+M+ +  +   +NK+V+  R   E+E   ++  ++K      N   + + L+ +  + + R+   R++  + D      K L    S L  +F  + G F+P L    ++RG+
Sbjct:   22 QLSGKKGKTPPSPPGLPLIGNLHQLGRH-THRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKSSSLPFN---VSKVLECLTNDVICRVALGRKYGGETD-----FKKLTDRLSELLGTF--SIGSFVPWLAWVDWIRGW 226          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.105e-15
Identity = 62/228 (27.19%), Postives = 118/228 (51.75%), Query Frame = 3
Query:  153 NWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFE----YNYGDFIPILRPFLRGYLKICKEVKE--RRLQLFKDYFVEE---RKK 809
            N  Q+G  L HR+L  L++KYG V+LL  G + ++V SS D A++++ T  V + SR ++ + D  +   +D+ F+ +GE+WR+ + I  +   +N  VQ  R    +E A ++  +++  +++   I L   L  +  N + R+   R ++ ++          +G    + Q  E    +N GD+IP L  ++  +  +  +VK+  + L +F +  +EE   RKK
Sbjct:   49 NLHQLGS-LPHRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDSSV--INLGEHLCSLTNNIISRVALGRTYDEKE----------SGIEHIIEQFVELLGIFNVGDYIPRLE-WVNKFTGLDAKVKKVAKELDMFLEIVIEEHIIRKK 262          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.750e-15
Identity = 60/211 (28.44%), Postives = 108/211 (51.18%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMY-RIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILR--PFLRGYLKICKEVKERRLQLFKDYFVEERK 806
            HR+L  L+ +YG ++LL  G+  +++VSS D A ++L T  V   +R +  V D     G+D+ F  YGE+W++M+ I      +NK+V+  +   EDE   ++E V+     +    V   +L + + N++  R    R++ S++D     +   N  R+  A   E+  G++IP L     +RG     +EV ++R   F +  V+E +
Sbjct:   54 HRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRDVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVENASSCSPPSPVNLSQLFMTLTNDIICRAALGRKYSSKED----GIDVENIVRAFSALVGEFPIGEYIPSLSWIDKIRGQDHKMEEV-DKRFDEFLERVVKEHE 259          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.125e-15
Identity = 63/215 (29.30%), Postives = 102/215 (47.44%), Query Frame = 3
Query:  186 RNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATN---GIVLRRRLQLMMYNNMYRIMFDRRFESQD---DPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKL 812
            R   + A++YG V+ +  G    VVVS+ + AKEVL     +   R RN     F+  GQD+++  YG H+ K+R++  +  FT K ++  R   EDE   +VE V +   A  N    +V+R  L ++ +NN+ R+ F +RF + +   D      K +     ++  S   +  +FI  LR       ++ K   ERR +L      E  K L
Sbjct:   53 RCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGDIDEQGREFKTIVNNGIKIGASL--SVAEFIWYLRWLCPLNEELYKTHNERRDRLTMKIIEEHAKSL 265          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.125e-15
Identity = 61/223 (27.35%), Postives = 110/223 (49.33%), Query Frame = 3
Query:  177 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKER---RLQLFKDYFVEERKKLASTKSMSN 836
            L H +   L+ ++G V+LLR G   +VV+SS + AK+VL ++ +E  SR + V   +FT   +D+ F  YGE WR+M++++ +  F  K  +  R+  E+E   +V+ + K  +  T  + LR+         ++R+ F + F   D    +RL+ L  E       F + + DF P    +L   +       E+   +L  F  + ++E  K+  ++  SN
Sbjct:   49 LLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKLSKSSQTQTL-VDLRKAFFSFTAGIIFRVSFGQNFRECDFIDMDRLEELVQESE--TNVFSFAFTDFFPTGLGWLVDRISGQHSRIEKAFSKLTKFFQHVIDEELKIGQSQDHSN 268          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.045e-14
Identity = 61/227 (26.87%), Postives = 107/227 (47.14%), Query Frame = 3
Query:  159 LQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATN------GIVLRRRLQLMMYNNMYRIMFDRRF---ESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICKEVKERRLQLFKDYFVEERKK 809
            L +G    H+ L DLA KYG +  +++G +N VVVS+ + AKE   T  +   S    +  ++       +V   YG +WR++R+I+   F +   V+Q       E    + ++ +D  +  N       + L++   L+++N + R++  +R+    + DD   NR      E  RLA +F    GD IP LR F   GY    +E  +   ++  ++  E R+K
Sbjct:   52 LLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAVSSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSGFATVELKQWFSLLVFNMILRMVCGKRYFSASTSDDEKANRCVKAVDEFVRLAATF--TVGDAIPYLRWFDFGGYENDMRETGKELDEIIGEWLDEHRQK 276          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.045e-14
Identity = 52/178 (29.21%), Postives = 96/178 (53.93%), Query Frame = 3
Query:  177 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIV-LRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIP 707
            L +++   ++++YG V+LLR+G   ++VVSS + A+EVL T  +E  +R +     +FT   +D+ F  +G+ WR+MR+I T+  F+ K ++  R+  E+E+  +V+ + K  +   N  V LR+ L     + + R+ F + F   D     +++ L  E    A    + + DF P
Sbjct:   47 LLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQNSSVDLRKVLFSFTASIICRLAFGQNFHQCDFVDMEKVEELVLESE--ANLGTFAFADFFP 222          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.365e-14
Identity = 48/144 (33.33%), Postives = 86/144 (59.72%), Query Frame = 3
Query:  177 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFE 608
            L HR L DL+KK+G VLLLR+G  ++VV+SS + A+EVL    +E  +R +      F+  G+D+ F  YGE  R++R++  + FF+ + V+  R+  E+E   +V+ +K+  +   N + L + L  ++ + ++R  F +R +
Sbjct:   48 LFHRCLHDLSKKHGPVLLLRLGFIDMVVISSKEAAEEVLKVHDLECCTRPKTNASSKFSRDGKDIAFAPYGEVSRELRKLSLINFFSTQKVRSFRYIREEENDLMVKKLKESAK-KKNTVDLSQTLFYLVGSIIFRATFGQRLD 190          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.365e-14
Identity = 51/179 (28.49%), Postives = 93/179 (51.96%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD--PLFNRLKALNGERSRLAQSFEYNYGDFIPIL 713
            HR+L  L+ +YG ++LL  G+  ++VVSS + A++VL T    F SR R+ +F+       D+    YGE+WR+M+ +  +  F+NK+V+  R   E+E + ++E ++K      N   L + L  +  + + ++   R++  + D   L  RL  L G          ++ G ++P L
Sbjct:   52 HRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSISLPVN---LSKILVSLTNDVICKVALGRKYGGETDFKELMERLNKLLG---------TFSVGSYVPWL 218          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.328e-14
Identity = 39/145 (26.90%), Postives = 85/145 (58.62%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQD 617
            HR LS L+ ++G ++LLR G+  +++VSS D A +V+ T  ++F +R         +  G+D+VF  YGE+WR ++ + T+   +NK+VQ      E+E   ++E + ++   +++ + L + +  M+ + M +++  +++  ++
Sbjct:   53 HRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETL-EEASLSSSSVNLSKLITNMVSDIMGKVVLGKKYSGEE 196          
The following BLAST results are available for this feature:
BLAST of CV884931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
C71AP_ARATH2.105e-1526.39Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME2.105e-1527.19Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71AJ_ARATH2.750e-1528.44Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI6.125e-1529.30Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71B8_ARATH6.125e-1527.35Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C82A2_SOYBN1.045e-1426.87Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71BZ_ARATH1.045e-1429.21Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71B3_ARATH1.365e-1433.33Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71AQ_ARATH1.365e-1428.49Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH2.328e-1426.90Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884931 ID=CV884931; Name=CV884931; organism=Citrus sinensis; type=EST; length=867bp
TTCATTACGTTTATCGTAACATGGATCTCCTCTTGCTGGAAAAGACGCTT
TTAGCCCTCTTCGCCGCCGTTGTTGTCGCCATTACCGTCTCTAAACTCCG
CGGAAAGCGCTTCAAGCTTCCCCCCGGCCCCCTCCCCGTCCCCGTCTTCG
GCAACTGGCTCCAGGTCGGCGATGACTTGAACCATCGGAACCTCTCCGAC
TTAGCCAAGAAATATGGAGATGTCCTCCTCCTCCGCATGGGCCAGCGCAA
CCTCGTCGTCGTCTCGTCGCCGGACCACGCCAAGGAGGTCCTGCACACGC
AGGGAGTGGAGTTCGGATCACGAACGAGGAACGTCGTGTTCGATATCTTC
ACTGGGAAGGGTCAGGACATGGTGTTCACAGTGTACGGCGAGCACTGGCG
AAAGATGCGGAGGATCATGACCGTCCCTTTCTTCACGAACAAAGTGGTTC
AGCAGCAGCGGTTTAATTGGGAAGACGAGGCCGCTAGAGTTGTTGAGGAT
GTTAAGAAGGACCCCGAGGCGGCGACCAATGGGATCGTCTTGAGGAGGCG
GCTGCAGCTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAA
GATTCGAGAGTCAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAAT
GGTGAGAGGAGTCGGTTGGCCCAGAGCTTTGAGTACAATTACGGTGATTT
TATTCCCATTTTGAGACCTTTCTTGAGAGGCTACTTGAAGATTTGTAAGG
AAGTAAAAGAAAGGAGACTCCAGCTCTTCAAGGACTACTTTGTTGAGGAG
AGAAAGAAATTGGCAAGCACGAAGAGCATGAGTAATGAAAGCTTGAAATG
CGCAATCGATCATATTT
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