CV884931

Overview
NameCV884931
Unique NameCV884931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884931_ssr223 microsatellite CV884931_ssr223:223..234. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1684 contig Csv1_Contig1684:28..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.040e-14
Identity = 52/177 (29.38%), Postives = 94/177 (53.11%), Query Frame = 3
Query:  177 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIP 707
            L H+ L DL+KK+G V+ LR+G   +VV+SS + A+E L T  +E  SR   +   +F+  G+D+ F VYG+ WR++R++    FF+ K VQ  ++  E+E   +++ + K+  +  + + L + L  +  + ++R  F + F          +K L  E      +  + + DF P
Sbjct:   51 LLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKL-KELASKQSPVDLSKILFGLTASIIFRTAFGQSFFDNKHVDQESIKELMFES---LSNMTFRFSDFFP 223          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.970e-14
Identity = 58/210 (27.62%), Postives = 97/210 (46.19%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKK---DPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIP-----ILRPFLRGYLKICKEVKERRLQLFKDY 788
            H  L+ +AKKYG ++ L++G   +VV S+P+ AK  L T  + F +R  N          QDMVF  YG  W+ +R++  +     K ++    NW +  A  +  + K   D       IV+   L   M N + ++M  +R   +     N  K +  E   +A  F  N GDFIP      L+   +G  K+ K+  +   ++F+++
Sbjct:   57 HVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALE----NWANVRANELGHMLKSMFDASHVGERIVVADMLTFAMANMIGQVMLSKRVFVEKGKEVNEFKNMVVELMTVAGYF--NIGDFIPQIAWMDLQGIEKGMKKLHKKFDDLLTKMFEEH 260          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.970e-14
Identity = 60/211 (28.44%), Postives = 94/211 (44.55%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKK---DPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICKEVKERRLQLFKDYFVEER 803
            H +L+ +AKKYG ++ L++G   + V S+PD AK  L T  + F +R  N          QDMVF  YG  W+ +R++  +     K ++    NW +  A  +  + K   D       +V+   L   M N + ++M  +R         N  K +  E   +A  F  N GDFIP L    L+G  K  K + ++   L    F E +
Sbjct:   54 HVSLAKMAKKYGAIMYLKVGTCGMAVASTPDAAKAFLKTLDINFSNRPPNAGATHLAYNAQDMVFAHYGPRWKLLRKLSNLHMLGGKALE----NWANVRANELGHMLKSMSDMSREGQRVVVAEMLTFAMANMIGQVMLSKRVFVDKGVEVNEFKDMVVELMTIAGYF--NIGDFIPCLAWMDLQGIEKRMKRLHKKFDALLTKMFDEHK 258          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.772e-14
Identity = 63/229 (27.51%), Postives = 107/229 (46.72%), Query Frame = 3
Query:  162 QVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNV-VFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESL 845
            Q+     H  L DLAKKYG ++ L++G+ + +V SSP  A+E+  T  + F  R  N+  F I +    DMV + YG +WR++R+I  +   + K VQ  R   E+E    ++ +        N   L + + L++Y    R  F  + ++ ++  F RL  L+     +A   E N  D  P L+     +L++    K +  ++ K + V     L   K   N+ L
Sbjct:   41 QLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSKEGTRIN---LSKEISLLIYGITTRAAFGEKNKNTEE--FIRL--LDQLTKAVA---EPNIADMFPSLK-----FLQLISTSKYKIEKIHKQFDVIVETILKGHKEKINKPL 254          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.845e-14
Identity = 63/231 (27.27%), Postives = 103/231 (44.59%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKK---DPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDH 863
            H +L+ +AKKYG ++ L++G   +VV S+PD AK  L T  + F +R  N          QDMVF  YG  W+ +R++  +     K ++    NW +  A  +  + K   D       +V+   L   M N + +++  +R         N  K +  E    A  F  N GDFIP L    L+G  K  K + ++   L    F +E K  +  +    + L C +++
Sbjct:   54 HVSLAKMAKKYGAIMYLKVGTCGMVVASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYGAQDMVFAHYGPRWKLLRKLSNLHMLGGKALE----NWANVRANELGHMLKSMFDMSREGERVVVAEMLTFAMANMIGQVILSKRVFVNKGVEVNEFKDMVVELMTTAGYF--NIGDFIPCLAWMDLQGIEKGMKRLHKKFDALLTKMF-DEHKATSYERKGKPDFLDCVMEN 277          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.845e-14
Identity = 47/156 (30.13%), Postives = 82/156 (52.56%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIV-LRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKAL 647
            H  L +LA KYG ++ L++G+ + ++V+SP+ A+E++ T  + F  R   V+  I +  G  +VF+ +G++WR++R+I TV   T K VQ  R   E+E A +V+ +          I  L + +  M +    R  F ++   Q   + N  K L
Sbjct:   66 HYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASEEGGSIFNLTQSIYSMTFGIAARAAFGKKSRYQQVFISNMHKQL 221          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.845e-14
Identity = 55/185 (29.73%), Postives = 96/185 (51.89%), Query Frame = 3
Query:  153 NWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIP 707
            N  Q+G  L HR+   L++ YG V+ L  G   +VVVS+ + A+EVL T  +E  +R +     +F+   +D+ F  YG+ WR+MR++  +  F++K ++  R+  E+E+  +V  + K  E  T  + LR+ L     + + R+ F + F   D    ++++ L  E      SF +   DF P
Sbjct:   40 NLHQLGKSL-HRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKLSKSAETRTM-VDLRKALFSYTASIVCRLAFGQNFHECDFVDMDKVEDLVLESETNLGSFAFT--DFFP 220          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.845e-14
Identity = 56/185 (30.27%), Postives = 98/185 (52.97%), Query Frame = 3
Query:  153 NWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIP 707
            N  Q+G  L HR+   L+++YG V+ LR G   +VV S+ + A+EVL T  +E  +R +     +FT   +D+ F  YGE WR+MR++  +  F++K ++  R+  E+E+  +V+ V +  +  T  + LR+ L     + + R+ F + F   D    ++++ L  E      SF +   DF P
Sbjct:   40 NLHQLGKSL-HRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKVTESAQTQTL-VDLRKALFSYTASIVCRLAFGQNFHECDFVDMDKVEELVLESETNLGSFAFI--DFFP 220          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.845e-14
Identity = 60/216 (27.78%), Postives = 109/216 (50.46%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILR--PFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTK 824
            HR+L  L+ +YG ++LL  G+  ++VVSS + A+EVL T  ++F +R R+         G+D+VF  YGE+WR+M+ +  +   TNK+V       E+E   +++ ++K   ++++   L      +  +   RI   R+  S+D+   +  K +   R  +    E+  GD++P L     + G+    KEV +    L  D  V+E  +  + K
Sbjct:   54 HRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEK-ASSSSSSENLSELFVTLPSDVTSRIALGRK-HSEDETARDLKKRV---RQIMELLGEFPIGDYVPALAWIDRINGFNARIKEVSQGFSDLM-DKVVQEHLEAGNHK 263          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.155e-13
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 3
Query:  192 LSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNG 533
            L DLA KYG V+ LR GQ + VV+SSP  A+EVL  + V F SR   +V +IF     D+ F  YG +WR +R++ TV   + K+V+Q     + E   +V ++    EAA  G
Sbjct:   60 LRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNI----EAAAGG 169          
The following BLAST results are available for this feature:
BLAST of CV884931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
C71B4_ARATH3.040e-1429.38Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C75A2_SOLME3.970e-1427.62Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C75A1_PETHY3.970e-1428.44Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C71DC_CATRO6.772e-1427.51Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C75A3_PETHY8.845e-1427.27Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C71DA_SOYBN8.845e-1430.13Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71BM_ARATH8.845e-1429.73Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71BL_ARATH8.845e-1430.27Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH8.845e-1427.78Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C99A3_ORYSJ1.155e-1340.35Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884931 ID=CV884931; Name=CV884931; organism=Citrus sinensis; type=EST; length=867bp
TTCATTACGTTTATCGTAACATGGATCTCCTCTTGCTGGAAAAGACGCTT
TTAGCCCTCTTCGCCGCCGTTGTTGTCGCCATTACCGTCTCTAAACTCCG
CGGAAAGCGCTTCAAGCTTCCCCCCGGCCCCCTCCCCGTCCCCGTCTTCG
GCAACTGGCTCCAGGTCGGCGATGACTTGAACCATCGGAACCTCTCCGAC
TTAGCCAAGAAATATGGAGATGTCCTCCTCCTCCGCATGGGCCAGCGCAA
CCTCGTCGTCGTCTCGTCGCCGGACCACGCCAAGGAGGTCCTGCACACGC
AGGGAGTGGAGTTCGGATCACGAACGAGGAACGTCGTGTTCGATATCTTC
ACTGGGAAGGGTCAGGACATGGTGTTCACAGTGTACGGCGAGCACTGGCG
AAAGATGCGGAGGATCATGACCGTCCCTTTCTTCACGAACAAAGTGGTTC
AGCAGCAGCGGTTTAATTGGGAAGACGAGGCCGCTAGAGTTGTTGAGGAT
GTTAAGAAGGACCCCGAGGCGGCGACCAATGGGATCGTCTTGAGGAGGCG
GCTGCAGCTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAA
GATTCGAGAGTCAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAAT
GGTGAGAGGAGTCGGTTGGCCCAGAGCTTTGAGTACAATTACGGTGATTT
TATTCCCATTTTGAGACCTTTCTTGAGAGGCTACTTGAAGATTTGTAAGG
AAGTAAAAGAAAGGAGACTCCAGCTCTTCAAGGACTACTTTGTTGAGGAG
AGAAAGAAATTGGCAAGCACGAAGAGCATGAGTAATGAAAGCTTGAAATG
CGCAATCGATCATATTT
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