CV884931

Overview
NameCV884931
Unique NameCV884931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884931_ssr223 microsatellite CV884931_ssr223:223..234. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1684 contig Csv1_Contig1684:28..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.277e-12
Identity = 59/215 (27.44%), Postives = 96/215 (44.65%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRF----ESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICKEVKERRLQLFKDYFVEERKKL 812
            H++ + +A+ YG ++ L+MG  ++VV +S   A + L T    F SR  N   +      QD+VF  YG  WR +R+I +V  F+ K +   R   +DE   +   +     A    + L + L +   N + R+M  +R         DP     K++  E   +A  F  N GDFIP L    ++G     K++  R      D   E + K+
Sbjct:   54 HQSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEVKTLTRAL---ASAGQKPVKLGQLLNVCTTNALARVMLGKRVFADGSGDVDPQAAEFKSMVVEMMVVAGVF--NIGDFIPQLNWLDIQGVAAKMKKLHARFDAFLTDILEEHKGKI 263          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.668e-12
Identity = 47/179 (26.26%), Postives = 90/179 (50.28%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD--PLFNRLKALNGERSRLAQSFEYNYGDFIPIL 713
            HR+L  L+ +YG ++LL  G   ++V S+ + A++VL T    F SR R+ +F+    K ++M    YGE+WR+M+ +  +   +NK+V+  +   ++E   ++E ++K      N   L + L  +  + + R+   R++    D   L +RL         + Q   +  G ++P L
Sbjct:   50 HRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSKPVN---LSKILSSLTNDVICRVALGRKYGVGTDFKELIDRL---------MRQLGTFTIGSYVPWL 216          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.845e-12
Identity = 53/177 (29.94%), Postives = 90/177 (50.85%), Query Frame = 3
Query:  177 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIP 707
            L H +L  L+ ++G V+L+R G   + V SS + AKEVL T  +E  +R + V   +FT   +D+ FT YGE WR+M++ + +  F+ K  +  R+  E+E   +V+ +    +  T  + LR+ L     + ++R  F + F   D    ++L+ L  E      S  +   DF P
Sbjct:   47 LLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTL-VDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFT--DFFP 220          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.845e-12
Identity = 56/196 (28.57%), Postives = 103/196 (52.55%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTR-NVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILR--PFLRGYLKICKEVKE 761
            HR+L  L+ +YG ++LL  G+  ++VVSS D A +++ T  ++  +R +  VV  IF G G++MVF+ YGE+WR+++ +  V     K VQ      E+E + ++E V+K   + ++ + L   L  +  +   R+   R++  ++    +  K    + + L   F    G++IP L     LRG  +  +EV +
Sbjct:   54 HRSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQLKVVEKIFNG-GREMVFSPYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEK-ASSDSSPLNLSELLLTLTSDVTSRVSLGRKYSKEES--MSDFKIQMRKITELVGGFP--VGEYIPCLAWIDKLRGVDEKAEEVSK 243          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.845e-12
Identity = 53/190 (27.89%), Postives = 96/190 (50.53%), Query Frame = 3
Query:  153 NWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSR-----TRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIP 707
            N  Q+G+ L HR+L  LA + G ++LL +G    ++VS+ + A+E+L T  + F SR      R + +D       D+ F+ YGE+WR++R+I  +   + K V   R   E+E   ++E + +        + L   L L+    + R+ F +++E +++   N+   L  E + L  +F    GD+ P
Sbjct:   43 NLHQLGN-LPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDC-----TDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTG-EAVNLSELLLLLSSGTITRVAFGKKYEGEEERK-NKFADLATELTTLMGAF--FVGDYFP 222          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.853e-12
Identity = 40/111 (36.04%), Postives = 65/111 (58.56%), Query Frame = 3
Query:  177 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKK 509
            L HR    L+ KYG ++ LR+G   +VV+SS + A+ VL T  +E  SR + V     +   +D+ F  YGE+WR++R++  +  F++K VQ  R+  E+E   VV+ V +
Sbjct:   50 LPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKVSE 160          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C515B_DICDI (Probable cytochrome P450 515B1 OS=Dictyostelium discoideum GN=cyp515b1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.853e-12
Identity = 57/229 (24.89%), Postives = 113/229 (49.34%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKV-VQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHI 866
            H +L++L +KYG V  ++ G  + V+++ PD   E  H     F  R     F++  GK Q++ FT   E+W+K+R I+ +    +K  + +  FN   E  R  + +KK  ++ ++ + +R  L+ + +N +Y  +F      +D+ + + +         L         D+I +LRPF   + K+ KE+ +R  +  K   V+++ +L     +  ++ KC ID++
Sbjct:   50 HLSLNELYQKYGKVFSMKFGSYDTVILNEPDVIVEAFHLNSTSFMDRILLPSFEV-VGKNQNIGFT-QTEYWKKIRGILNISLTKSKTRLLEGLFN--QEYFRFDQFIKKQLKSKSDTMFIRPYLKRLSFNIIYSYLFSETIPYEDELIPSDILDFIHASEELLVVLSRMPSDYIKVLRPF-ESHKKL-KEICDRMSKFIKPR-VDKKVEL-----LDQDNPKCFIDYL 266          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.339e-12
Identity = 57/225 (25.33%), Postives = 107/225 (47.56%), Query Frame = 3
Query:  159 LQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRP---FLRGYLKICKEVKERRLQLFKDYFVEERKKLASTK 824
            L +   L  + L  L +KYG ++ L++G+ + +VVSSP  A E++ T  V F  R + +          D+ F  YG++WR++R+I T+   + K VQ      +DE  ++++ +     +A + I L  +L  ++   + R  F +  + QD+ +    KA+      +   FE +  D  P L+P     R   K+ + V +R  ++ +D   +  +K    K
Sbjct:   49 LALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIH---SSAGSPIDLSGKLFSLLGTTVSRAAFGKENDDQDEFMSLVRKAIT-----MTGGFEVD--DMFPSLKPLHLLTRQKAKV-EHVHQRADKILEDILRKHMEKRTRVK 262          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.339e-12
Identity = 35/109 (32.11%), Postives = 66/109 (60.55%), Query Frame = 3
Query:  183 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKK 509
            HR+L  L+ +YG ++LL  G+  ++VVSS D A +++ T  ++  +R R  V +     G+++VF+ YG++WR+++ +  V     K+VQ      E+E + ++E V+K
Sbjct:   53 HRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEK 161          
BLAST of CV884931 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.279e-12
Identity = 49/164 (29.88%), Postives = 89/164 (54.27%), Query Frame = 3
Query:  177 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRL 668
            L H+ L DL+KK+G VLLLR+G  ++VV+SS + A+E L    +E  +R    V       GQD+    YGE  R++R++  + FF+   V+  R+  E+E   +V+ + K+     + + L + L  ++ + ++R  F +RF+  +     +++ L  E  +L
Sbjct:   45 LFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKL-KEAALKKSSVDLSQTLFGLVGSIIFRSAFGQRFDEGNHVNAEKIEDLMFEVQKL 207          
The following BLAST results are available for this feature:
BLAST of CV884931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
F3PH_PETHY1.277e-1227.44Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C71AN_ARATH1.668e-1226.26Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71BU_ARATH2.845e-1229.94Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH2.845e-1228.57Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71A1_PERAE2.845e-1227.89Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71B2_ARATH4.853e-1236.04Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C515B_DICDI4.853e-1224.89Probable cytochrome P450 515B1 OS=Dictyostelium di... [more]
C71D8_SOYBN6.339e-1225.33Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71AF_ARATH6.339e-1232.11Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71BO_ARATH8.279e-1229.88Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884931 ID=CV884931; Name=CV884931; organism=Citrus sinensis; type=EST; length=867bp
TTCATTACGTTTATCGTAACATGGATCTCCTCTTGCTGGAAAAGACGCTT
TTAGCCCTCTTCGCCGCCGTTGTTGTCGCCATTACCGTCTCTAAACTCCG
CGGAAAGCGCTTCAAGCTTCCCCCCGGCCCCCTCCCCGTCCCCGTCTTCG
GCAACTGGCTCCAGGTCGGCGATGACTTGAACCATCGGAACCTCTCCGAC
TTAGCCAAGAAATATGGAGATGTCCTCCTCCTCCGCATGGGCCAGCGCAA
CCTCGTCGTCGTCTCGTCGCCGGACCACGCCAAGGAGGTCCTGCACACGC
AGGGAGTGGAGTTCGGATCACGAACGAGGAACGTCGTGTTCGATATCTTC
ACTGGGAAGGGTCAGGACATGGTGTTCACAGTGTACGGCGAGCACTGGCG
AAAGATGCGGAGGATCATGACCGTCCCTTTCTTCACGAACAAAGTGGTTC
AGCAGCAGCGGTTTAATTGGGAAGACGAGGCCGCTAGAGTTGTTGAGGAT
GTTAAGAAGGACCCCGAGGCGGCGACCAATGGGATCGTCTTGAGGAGGCG
GCTGCAGCTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAA
GATTCGAGAGTCAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAAT
GGTGAGAGGAGTCGGTTGGCCCAGAGCTTTGAGTACAATTACGGTGATTT
TATTCCCATTTTGAGACCTTTCTTGAGAGGCTACTTGAAGATTTGTAAGG
AAGTAAAAGAAAGGAGACTCCAGCTCTTCAAGGACTACTTTGTTGAGGAG
AGAAAGAAATTGGCAAGCACGAAGAGCATGAGTAATGAAAGCTTGAAATG
CGCAATCGATCATATTT
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