CV884925

Overview
NameCV884925
Unique NameCV884925
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1459 contig Csv1_Contig1459:47..995. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884925 vs. ExPASy Swiss-Prot
Match: CP17A_CAPHI (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra hircus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.246e-11
Identity = 73/316 (23.10%), Postives = 128/316 (40.51%), Query Frame = 2
Query:   26 LFILSALVLKAIKHSR-RLPPSPWALPIVXXXXXXXXXXXXX--FHKLSTRYGPLMSIRIGSVLGVVTSSPDVTKELLKTNDVTFAARNSSAAIECLTYN-SSFAFAPNGPYWQFMKKLT-TVELLGSRTLLQFLPIRTNELHELIRFLFEKSKSGGSVSITDELLKFTNNIISQMMLSIRCSGKGGQAEECRTLAREVTEIFGEFNISDIIWIFKSFDIQGFRRRFKDIHRR---FDSLLENIITNRXXXXXXXXXXXXXXXXXXXXXXXXXXNQNSEIKLTRDHIKALFLDFLTAGTDTSSMTVEWALAELINH 949
            L  L+ L     KHS  + P S  +LP+V               F KL  +YGP+ S R+GS   V+     + +E+L      F+ R   A ++ L+ N    AFA +G +WQ  +KL      L     L+   I   E + L  FL   ++ G S+ +++ L     NIIS +  +     +    +  + +   + E+  +  + DI    K F  +   +    +  R    + +LE    N                           +Q+S++ L+  H+ A   D   AG +T++  ++W +A L++H
Sbjct:    9 LLTLAYLFWPKTKHSAAKYPRSLPSLPLVGSLLFLPRRGQQHENFFKLQEKYGPIYSFRLGSKTTVMIGHHQLAREVLLKKGKEFSGRPKVATLDILSDNQKGIAFADHGAHWQLHRKLVLNAFALFKDGNLKLEKIINQEANVLCDFL--ATQHGQSIDLSEPLSLAVTNIISFICFNFSFKNEDPALKAIQNVNDGILEVLSKEILLDIFPALKIFPSKAMEKMKGCVETRNELLNEILEKCQENFTSDSITNLLHILMQAKVNADNNNAGPDQDSKL-LSNRHMLATIADIFGAGVETTTSVIKWIVAYLLHH 321          
BLAST of CV884925 vs. ExPASy Swiss-Prot
Match: CP17A_BOVIN (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bos taurus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.246e-11
Identity = 73/322 (22.67%), Postives = 131/322 (40.68%), Query Frame = 2
Query:    8 LIFYASLFILSALVLKAIKHS-RRLPPSPWALPIVXXXXXXXXXXXXX--FHKLSTRYGPLMSIRIGSVLGVVTSSPDVTKELLKTNDVTFAARNSSAAIECLTYN-SSFAFAPNGPYWQFMKKLT-TVELLGSRTLLQFLPIRTNELHELIRFLFEKSKSGGSVSITDELLKFTNNIISQMMLSIRCSGKGGQAEECRTLAREVTEIFGEFNISDIIWIFKSFDIQGFRRRFKDIHRR---FDSLLENIITNRXXXXXXXXXXXXXXXXXXXXXXXXXXNQNSEIKLTRDHIKALFLDFLTAGTDTSSMTVEWALAELINH 949
            L+    L  L+ L     KHS  + P S  +LP+V               F KL  +YGP+ S R+GS   V+     + +E+L      F+ R   A ++ L+ N    AFA +G +WQ  +KL      L     L+   I   E + L  FL   ++ G ++ +++ L     NIIS +  +     +    +  + +   + E+  +  + DI  + K F  +   +    +  R    + +LE    N                           +Q+S++ L+  H+ A   D   AG +T++  ++W +A L++H
Sbjct:    3 LLLAVFLLTLAYLFWPKTKHSGAKYPRSLPSLPLVGSLPFLPRRGQQHKNFFKLQEKYGPIYSFRLGSKTTVMIGHHQLAREVLLKKGKEFSGRPKVATLDILSDNQKGIAFADHGAHWQLHRKLALNAFALFKDGNLKLEKIINQEANVLCDFL--ATQHGEAIDLSEPLSLAVTNIISFICFNFSFKNEDPALKAIQNVNDGILEVLSKEVLLDIFPVLKIFPSKAMEKMKGCVQTRNELLNEILEKCQENFSSDSITNLLHILIQAKVNADNNNAGPDQDSKL-LSNRHMLATIGDIFGAGVETTTSVIKWIVAYLLHH 321          
BLAST of CV884925 vs. ExPASy Swiss-Prot
Match: CP17A_BISBI (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bison bison GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.627e-11
Identity = 73/322 (22.67%), Postives = 131/322 (40.68%), Query Frame = 2
Query:    8 LIFYASLFILSALVLKAIKHS-RRLPPSPWALPIVXXXXXXXXXXXXX--FHKLSTRYGPLMSIRIGSVLGVVTSSPDVTKELLKTNDVTFAARNSSAAIECLTYN-SSFAFAPNGPYWQFMKKLT-TVELLGSRTLLQFLPIRTNELHELIRFLFEKSKSGGSVSITDELLKFTNNIISQMMLSIRCSGKGGQAEECRTLAREVTEIFGEFNISDIIWIFKSFDIQGFRRRFKDIHRR---FDSLLENIITNRXXXXXXXXXXXXXXXXXXXXXXXXXXNQNSEIKLTRDHIKALFLDFLTAGTDTSSMTVEWALAELINH 949
            L+    L  L+ L     KHS  + P S  +LP+V               F KL  +YGP+ S R+GS   V+     + +E+L      F+ R   A ++ L+ N    AFA +G +WQ  +KL      L     L+   I   E + L  FL   ++ G ++ +++ L     NIIS +  +     +    +  + +   + E+  +  + DI  + K F  +   +    +  R    + +LE    N                           +Q+S++ L+  H+ A   D   AG +T++  ++W +A L++H
Sbjct:    3 LLLAVFLLTLAYLFWPKTKHSGAKYPRSLPSLPLVGSLPFLPRRGQQHKNFFKLQEKYGPIYSFRLGSKTTVMIGHHQLAREVLLKKGKEFSGRPKVATLDILSDNQKGIAFADHGAHWQLHRKLALNAFALFKDGNLKLEKIINQEANVLCDFL--ATQHGEAIDLSEPLSLAVTNIISFICFNFSFKNEDPALKAIQNVNDGILEVLSKEVLLDIFPVLKIFPSKAMEKMKGYVQTRNELLNEILEKCQENFSSDSITNLLHILIQAKVNADNNNAGPDQDSKL-LSSRHMLATIGDIFGAGVETTTSVIKWIVAYLLHH 321          
BLAST of CV884925 vs. ExPASy Swiss-Prot
Match: CP1A1_CANFA (Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.624e-11
Identity = 73/329 (22.19%), Postives = 122/329 (37.08%), Query Frame = 2
Query:    2 SPLIFYASLFILSALVLKA----IKHSRRLPPSPWALPIVXXXXXXXXXXXXXFHKLSTRYGPLMSIRIGSVLGVVTSSPDVTKELLKTNDVTFAARNSSAAIECLTYNSSFAFAP-NGPYWQFMKKLTTVELL--------GSRTLLQFLPIRTNELHELIRFLFEKSKSGGSVSITDELLKFTNNIISQMMLSIRCSGKGGQAEECRTLAREVTEIFGEFNISDIIWIFKSFDIQGFRRRFKDIHRRFDSLLENIITNRXXXXXXXXXXXXXXXXXXXXXXXXXXNQNSEIKLTRDHIKALFLDFLTAGTDTSSMTVEWALAELINH 949
            S L+  +++F L   V+KA    +    + PP PW  P++               +LS RYG ++ IRIGS   +V S  D  ++ L      F  R    +   +T   S  F+P +GP W   ++L    L          S          + E   L+  L E+    G       ++    N+I  M  S R      +      L+ E  E     N  D   I +          FKD+++RF S ++ ++                             ++N+ I+L+ + I  + LD   AG DT +  + W+L  L+ +
Sbjct:   14 SELLLASTVFCLVLWVVKAWQPRLPKGLKSPPGPWGWPVLGNVLTLGKSPHLALSRLSQRYGDVLQIRIGSTPVLVLSGLDTIRQALVRQGDDFKGRPDLYSFSLVTDGQSLTFSPDSGPVWAARRRLAQNALKSFSIASDPASSCSCYLEEHVSKEAEVLLSRLQEQMAEVGRFDPYRYIVVSVANVICAMCFSKRYDHDDQELLSLVNLSNEFGEGVASANPLDFFPILRYLPNPAL-DFFKDLNKRFYSFMQKMV-KEHYKTFEKGQIRDVTDSLIEHCQDKRLDENANIQLSDEKIVNVVLDLFGAGFDTVTTAISWSLLYLVTN 340          
BLAST of CV884925 vs. ExPASy Swiss-Prot
Match: CP1A1_MACMU (Cytochrome P450 1A1 OS=Macaca mulatta GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.734e-11
Identity = 69/322 (21.43%), Postives = 122/322 (37.89%), Query Frame = 2
Query:   32 ILSALVLKAIKHSR-------RLPPSPWALPIVXXXXXXXXXXXXXFHKLSTRYGPLMSIRIGSVLGVVTSSPDVTKELLKTNDVTFAARNSSAAIECLTYNSSFAFAP-NGPYWQFMKKLTTVELL--------GSRTLLQFLPIRTNELHELIRFLFEKSKSGGSVSITDELLKFTNNIISQMMLSIRCSGKGGQAEECRTLAREVTEIFGEFNISDIIWIFKSFDIQGFRRRFKDIHRRFDSLLENIITNRXXXXXXXXXXXXXXXXXXXXXXXXXXNQNSEIKLTRDHIKALFLDFLTAGTDTSSMTVEWALAELINH 949
            ++  LV   I+ SR       + PP PW  P++               ++S RYG ++ IRIGS   +V S  D  ++ L      F  R +  +   ++   S +F P +GP W   ++L    L          S +        + E   LI  L E+    G  +    ++    N+I  +    R      +      L+    E+ G  N +D I I +    +     FKD++ +F S ++ +I                             ++N+ I+L+ + I  + LD   AG DT +  + W+L  L+ +
Sbjct:   17 LIFCLVFWVIRASRPRVPKGLKNPPGPWGWPLIGHILTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSGLDTIRQALVQQGDDFKGRPNLYSFTLISNGQSMSFGPDSGPVWAARRRLAQNGLKSFSIASDPASSSSCYLEEHVSKEAEVLISKLQEQMAGPGHFNPYRYVVISVANVICAICFGQRYDHNHQELLSLVNLSNNFGEVVGSGNPADFIPILRYLPNRSL-NGFKDLNEKFHSFMQKMI-KEHYKTFEKGHIRDITDSLIEHCQEKQLDENANIQLSDEKIVNVVLDLFGAGFDTVTTAISWSLMYLVTN 336          
BLAST of CV884925 vs. ExPASy Swiss-Prot
Match: CP1A1_MACFA (Cytochrome P450 1A1 OS=Macaca fascicularis GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.734e-11
Identity = 69/322 (21.43%), Postives = 122/322 (37.89%), Query Frame = 2
Query:   32 ILSALVLKAIKHSR-------RLPPSPWALPIVXXXXXXXXXXXXXFHKLSTRYGPLMSIRIGSVLGVVTSSPDVTKELLKTNDVTFAARNSSAAIECLTYNSSFAFAP-NGPYWQFMKKLTTVELL--------GSRTLLQFLPIRTNELHELIRFLFEKSKSGGSVSITDELLKFTNNIISQMMLSIRCSGKGGQAEECRTLAREVTEIFGEFNISDIIWIFKSFDIQGFRRRFKDIHRRFDSLLENIITNRXXXXXXXXXXXXXXXXXXXXXXXXXXNQNSEIKLTRDHIKALFLDFLTAGTDTSSMTVEWALAELINH 949
            ++  LV   I+ SR       + PP PW  P++               ++S RYG ++ IRIGS   +V S  D  ++ L      F  R +  +   ++   S +F P +GP W   ++L    L          S +        + E   LI  L E+    G  +    ++    N+I  +    R      +      L+    E+ G  N +D I I +    +     FKD++ +F S ++ +I                             ++N+ I+L+ + I  + LD   AG DT +  + W+L  L+ +
Sbjct:   17 LIFCLVFWVIRASRPRVPKGLKNPPGPWGWPLIGHILTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSGLDTIRQALVQQGDDFKGRPNLYSFTLISNGQSMSFGPDSGPVWAARRRLAQNGLKSFSIASDPASSSSCYLEEHVSKEAEVLISKLQEQMAGPGHFNPYRYVVISVANVICAICFGQRYDHNHQELLSLVNLSNNFGEVVGSGNPADFIPILRYLPNRSL-NGFKDLNEKFHSFMQKMI-KEHYKTFEKGYIRDITDSLIEHCQEKQLDENANIQLSDEKIVNVVLDLFGAGFDTVTTAISWSLMYLVTN 336          
BLAST of CV884925 vs. ExPASy Swiss-Prot
Match: CP1A1_MOUSE (Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.074e-11
Identity = 69/327 (21.10%), Postives = 121/327 (37.00%), Query Frame = 2
Query:    8 LIFYASLFILSALVLKA----IKHSRRLPPSPWALPIVXXXXXXXXXXXXXFHKLSTRYGPLMSIRIGSVLGVVTSSPDVTKELLKTNDVTFAARNSSAAIECLTYNSSFAFAP-NGPYWQFMKKLTTVELLG--------SRTLLQFLPIRTNELHELIRFLFEKSKSGGSVSITDELLKFTNNIISQMMLSIRCSGKGGQAEECRTLAREVTEIFGEFNISDIIWIFKSFDIQGFRRRFKDIHRRFDSLLENIITNRXXXXXXXXXXXXXXXXXXXXXXXXXXNQNSEIKLTRDHIKALFLDFLTAGTDTSSMTVEWALAELINH 949
            L+   ++F L   V++A    +    + PP PW LP +               +LS +YG ++ IRIGS   VV S  +  K+ L      F  R    +   +T   S  F P +GP W   ++L    L          S +        + E + L+  L +     G       L+    N+I  +    R      +      L+ E  E+ G    +D I + +          FKD++ +F S ++ +I                             ++N+ ++L+ D +  + LD   AG DT +  + W+L  L+ +
Sbjct:   16 LLLAVTVFCLGFWVVRATRTWVPKGLKTPPGPWGLPFIGHMLTVGKNPHLSLTRLSQQYGDVLQIRIGSTPVVVLSGLNTIKQALVRQGDDFKGRPDLYSFTLITNGKSMTFNPDSGPVWAARRRLAQNALKSFSIASDPTSASSCYLEEHVSKEANYLVSKLQKVMAEVGHFDPYKYLVVSVANVICAICFGQRYDHDDQELLSIVNLSNEFGEVTGSGYPADFIPVLRYLPNSSL-DAFKDLNDKFYSFMKKLI-KEHYRTFEKGHIRDITDSLIEHCQDRKLDENANVQLSDDKVITIVLDLFGAGFDTVTTAISWSLMYLVTN 340          
BLAST of CV884925 vs. ExPASy Swiss-Prot
Match: CP1A1_HUMAN (Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.074e-11
Identity = 72/333 (21.62%), Postives = 124/333 (37.24%), Query Frame = 2
Query:    5 PLIFYASLFILSA----LVLKAIKHSR-------RLPPSPWALPIVXXXXXXXXXXXXXFHKLSTRYGPLMSIRIGSVLGVVTSSPDVTKELLKTNDVTFAARNSSAAIECLTYNSSFAFAP-NGPYWQFMKKLTTVELL--------GSRTLLQFLPIRTNELHELIRFLFEKSKSGGSVSITDELLKFTNNIISQMMLSIRCSGKGGQAEECRTLAREVTEIFGEFNISDIIWIFKSFDIQGFRRRFKDIHRRFDSLLENIITNRXXXXXXXXXXXXXXXXXXXXXXXXXXNQNSEIKLTRDHIKALFLDFLTAGTDTSSMTVEWALAELI 943
            P+   A+ F+L++    LV   I+ SR       + PP PW  P++               ++S +YG ++ IRIGS   VV S  D  ++ L      F  R        ++   S +F+P +GP W   ++L    L          S T        + E   LI  L E     G  +    ++    N+I  +    R      +      L     E+ G  N +D I I +          FKD++ +F S ++ ++                             ++N+ ++L+ + I  + LD   AG DT +  + W+L  L+
Sbjct:    4 PISMSATEFLLASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSL-NAFKDLNEKFYSFMQKMV-KEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLV 334          
The following BLAST results are available for this feature:
BLAST of CV884925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
CP17A_CAPHI1.246e-1123.10Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra ... [more]
CP17A_BOVIN1.246e-1122.67Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bos ta... [more]
CP17A_BISBI1.627e-1122.67Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bison ... [more]
CP1A1_CANFA3.624e-1122.19Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 ... [more]
CP1A1_MACMU4.734e-1121.43Cytochrome P450 1A1 OS=Macaca mulatta GN=CYP1A1 PE... [more]
CP1A1_MACFA4.734e-1121.43Cytochrome P450 1A1 OS=Macaca fascicularis GN=CYP1... [more]
CP1A1_MOUSE8.074e-1121.10Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1... [more]
CP1A1_HUMAN8.074e-1121.62Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884925 ID=CV884925; Name=CV884925; organism=Citrus sinensis; type=EST; length=949bp
TTCACCACTGATTTTTTATGCTTCCCTCTTCATCTTGTCCGCCCTAGTGC
TGAAAGCCATCAAACACTCACGGCGACTGCCACCAAGCCCGTGGGCCTTG
CCGATCGTCGGGCACCTCCATCTCCTCGGCCCTTCCCTTCACCATTCTTT
TCACAAGCTTTCAACTCGCTATGGCCCCTTGATGTCCATACGCATAGGCT
CTGTCCTAGGTGTTGTAACTTCTTCTCCTGATGTAACCAAAGAGCTTCTC
AAAACAAATGATGTTACTTTTGCCGCCCGGAACAGCTCTGCCGCCATTGA
ATGCCTTACATATAACTCTTCTTTTGCTTTTGCTCCCAACGGCCCATATT
GGCAATTCATGAAAAAGCTGACCACAGTTGAGCTCTTGGGCAGCAGAACC
CTTCTCCAGTTTCTTCCTATTCGAACAAATGAGTTGCACGAGCTTATTCG
GTTTCTATTTGAGAAGTCTAAATCTGGCGGAAGTGTTAGTATTACAGATG
AATTGTTGAAATTTACAAACAATATAATATCTCAAATGATGTTGAGCATT
AGATGTTCAGGAAAGGGGGGCCAGGCTGAAGAGTGTAGAACCCTGGCTCG
TGAAGTGACTGAAATTTTTGGCGAGTTTAATATCTCTGACATTATTTGGA
TTTTCAAAAGCTTTGATATTCAGGGTTTTCGCAGGAGATTCAAGGATATT
CATCGACGGTTCGATTCGTTGCTGGAGAATATCATAACAAATCGTGAAAA
ATTAAGGAAGGAGAAGAAGGAAAGTGAAGAGAAAGTGAAGGATTTGCTTG
ATATTTTGCTCGATGTTCTGGAGAATCAGAATTCGGAGATCAAGTTAACT
AGAGATCACATCAAAGCCCTATTTTTGGATTTCCTCACAGCTGGCACAGA
CACTTCATCCATGACAGTGGAATGGGCATTGGCAGAGCTCATAAACCAT
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