CV884924

Overview
NameCV884924
Unique NameCV884924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.507e-21
Identity = 53/115 (46.09%), Postives = 76/115 (66.09%), Query Frame = -1
Query:  545 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDF---KVTSPDGVVDMSERPGLSSPRAQDLVCV 880
            Y IP  T   +N+W++GRDP  W+NP EF PERF    N++ID++GL ++LLPFG+GRRGCPG S A+  +  ALA ++  F+F   K T P+  +DM+E  G+++ R   L  V
Sbjct:  391 YHIPARTQALINVWAIGRDPLSWENPEEFCPERFL---NNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPED-LDMTECTGIATRRKSPLPVV 501          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.886e-21
Identity = 49/117 (41.88%), Postives = 73/117 (62.39%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIW-KNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVAR 880
            Y IPKGT L VN+W++GRDP +W  NP EF PERF    N++ID RG H++L+PFG GRR C G  + +  +   L +++  FD+K+   +  ++M E  GL+  +A  L  + + R
Sbjct:  392 YYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKLGFSEDELNMDETFGLALQKAVPLAAMVIPR 508          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.311e-20
Identity = 49/120 (40.83%), Postives = 77/120 (64.17%), Query Frame = -1
Query:  521 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVARCAPS 880
            Y + KGT L  N+W +  DP +W +P EF+P+RF + ++ +IDV+G H+QLLPFG+GRR CPG+S  +Q +  ALAS +  F+    S +  +DM+E  G+++ +A  L  +     +PS
Sbjct:  403 YHVKKGTRLITNIWKIHTDPNVWSDPFEFKPDRFLT-THKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPSTE-PLDMTEAFGVTNTKATPLEVLVKPCLSPS 520          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.713e-20
Identity = 52/125 (41.60%), Postives = 79/125 (63.20%), Query Frame = -1
Query:  518 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFF-SQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKV---TSPDGVVDMSERPGLSSPRAQDLVCVPVARCAPSI 880
            Y IPKG+ L  N+W++ RDP  W +PL F+PERF      S +DV+G  ++L+PFG GRR C GLSL ++ +    A+++Q FD+++    +P+  ++M E  GL+  RA  LV  P  R AP++
Sbjct:  384 YHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPE-KLNMEESYGLTLQRAVPLVVHPKPRLAPNV 507          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.713e-20
Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVAR 880
            + IPKGT L VN+W++GRDP +W+NP EF P+RF  + N++ID RG  ++L+PFG GRR C G  L +  +   L +++  FD+++ S    ++M E  GL+  +A  L  +   R
Sbjct:  387 HYIPKGTRLSVNIWAIGRDPSLWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFDWELPSSVIELNMDEPFGLALQKAVPLAAMVTPR 502          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.713e-20
Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPV 880
            Y IP  T+L VN+WS+GRDPK WKNP EF PERF    +  ID +G  +++LPFG+GRR CPG++ A+  +   L +++  FD+++   D  +DM E   ++  +   L  VPV
Sbjct:  385 YNIPSKTILLVNVWSIGRDPKHWKNPEEFNPERFI---DCPIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDWRLPEEDKDLDMEEAGDVTIIKKVPLKLVPV 495          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.713e-20
Identity = 53/118 (44.92%), Postives = 77/118 (65.25%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVV----DMSERPGLSSPRAQDLVCVPV 880
            Y I   TLL+VN+W++GRDP  WK+   F PERF    ++ ID +G +++LLPFG+GRR CPG+ +    +   LA+M+  FD++V  PDG+V    DM E PGL+  +  +L+ VPV
Sbjct:  383 YKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERFM---DNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEV--PDGMVVEDIDMEESPGLAVGKKNELLLVPV 495          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20
Identity = 55/120 (45.83%), Postives = 77/120 (64.17%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPVAR 880
            Y IPKG  + VN  ++GRDPK WK+PL+FQPERF    +S+I+  G  +Q +PFG+GRR CPG  LA++ +P  LAS++  F +++  PDGV    +DM E   LS   A+ L  +P  R
Sbjct:  372 YTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFL---DSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWEL--PDGVPNEKLDMEELFTLSLCMAKPLRVIPKVR 486          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20
Identity = 51/118 (43.22%), Postives = 77/118 (65.25%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPV 880
            Y IPK T ++VN+W++ R+P +WK+P  F PERF    +SEID +G+ ++LLPFG+GRR CPG+ L M  +   L +++  FD+K+  P+G+    VD+ E  GL  P+   L  +PV
Sbjct:  379 YDIPKKTWIYVNIWAVQRNPNVWKDPEVFIPERFM---HSEIDYKGVDFELLPFGSGRRMCPGMGLGMALVHLTLINLLYRFDWKL--PEGMNIEDVDLEESYGLVCPKKVPLQLIPV 491          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.921e-20
Identity = 50/117 (42.74%), Postives = 75/117 (64.10%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVP 880
            Y IP  T L VN+W++GRDP  WK+P  F PERF   +++ ID +G H++LLPFG GRR CP + +    +   LA+++  FD+K+  P+G+    +DM E PGL+  +  +L+ VP
Sbjct:  383 YTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERF---TDNNIDAKGQHFELLPFGGGRRMCPAVYMGTTMVEFGLANLLYHFDWKL--PEGMKVDDIDMEEAPGLTVNKKNELILVP 494          
The following BLAST results are available for this feature:
BLAST of CV884924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
C71A4_SOLME4.507e-2146.09Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C75A4_GENTR5.886e-2141.88Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C82A4_SOYBN1.311e-2040.83Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
F3PH_ARATH1.713e-2041.60Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C75A5_EUSGR1.713e-2040.52Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71BO_ARATH1.713e-2042.98Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH1.713e-2044.92Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C80A1_BERST2.237e-2045.83Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71BE_ARATH2.237e-2043.22Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71BV_ARATH2.921e-2042.74Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884924 ID=CV884924; Name=CV884924; organism=Citrus sinensis; type=EST; length=880bp
TGATATCAATTTTCTTGTAGTGCGAAGGATTTCTTATTCTAATAGTAGTG
ACAAGAAAGGATACATAAATAGATTGAGGCTATGATTCTTAAAAAAAAAG
AATTTTCAAAGAAATTATCGTGCATGATGGGTAACGTATCAATCAAATTA
GGTCCAAAATTGAATTCATCGTTTAGGTGTCCATAATGTCAAACACGTTG
AGGAAAATTTTAGATTTTCCGTTGAAATTTCAACGATCACTAATCGTTGA
TCTTGAAGTCATGCAAAGTATCATAGTCTTTTGAGTTTCAACCTAAGACG
TGGCCATATTGTGGACCATAAGAAATTTTCAAAGATCACCATGTCGCTAC
ATTGTTCAAGTTCTTGAATTTCAACGAAAGATGTAGAATTTTCTTCTACG
TGCGACAGCGACACCTTACTGTCCAACCACTTTGAGTTGAGTTAACCACA
CATTAAACAGAGACACTGACTGAACACTGCTAAAGACACTTTAATTTCAA
CGTACATCCGAATTTACGATACTAGGAGCACAACGTGCAACTGGCACGCA
CACAAGATCCTGTGCTCTTGGAGATGATAATCCTGGGCGTTCAGACATAT
CAACCACACCATCGGGACTCGTTACTTTGAAATCGAAACACTGAATCATA
GATGCTAGAGCTGTCGGCAACTCTTGCATGGCTAAAGAAAGGCCAGGGCA
GCCTCTTCTCCCAGTGCCAAATGGCAGCAATTGGTAATGCAATCCCCTAA
CATCAATCTCACTATTTGACTGTGAGAAGAATCGTTCTGGCTGAAATTCC
AACGGGTTCTTCCAAATTTTGGGGTCCCTACCCATGGACCAAAGGTTCAC
AAACAACAGAGTGCCTTTAGGAATTATGTA
back to top