CV884924

Overview
NameCV884924
Unique NameCV884924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.815e-20
Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKV---TSPDGVVDMSERPGLSSPRAQDLVCVP 880
            Y IPKGT + VN W++GRDP+ W NP EF+PERF     S++DV+G +Y+L+PFG GRR C GL L  + +     S++  FD+++    SP   ++M E  G+++ + Q L  +P
Sbjct:  353 YDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFL---ESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKS-INMEESMGITARKKQPLKVIP 464          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.815e-20
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = -1
Query:  524 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTS--PDGVVDMSERPGLSSPRAQDLVCVPVARCAP 880
            Y IP  T +F+N+W++GRDP+ W++P  F+PERF   S    D  G  ++ +PFG GRR CPGL   +  +   LA ++  FD+K+     D  +DM+E PGLS P+ +++  VP    +P
Sbjct:  379 YTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSR---DFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLSGPKKKNVCLVPTLYKSP 496          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.815e-20
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = -1
Query:  524 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTS--PDGVVDMSERPGLSSPRAQDLVCVPVARCAP 880
            Y IP  T +F+N+W++GRDP+ W++P  F+PERF   S    D  G  ++ +PFG GRR CPGL   +  +   LA ++  FD+K+     D  +DM+E PGLS P+ +++  VP    +P
Sbjct:  379 YTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSR---DFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLSGPKKKNVCLVPTLYKSP 496          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.815e-20
Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPV 880
            Y IP    + VN W++GRDPK+W +P EF+PERF    +S +D RG H++LLPFG+GRR CPG+++ M  L   L +++  FD+K+  PDG+    +D  E   L+  +   L  VPV
Sbjct:  387 YDIPPKRRILVNAWAIGRDPKLWTDPEEFKPERFI---DSPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKL--PDGMSHKDIDTEEAGTLTVVKKVHLKLVPV 499          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.983e-20
Identity = 51/120 (42.50%), Postives = 75/120 (62.50%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPVAR 880
            Y IP  T L VN+W++GRDP  WK+P  F PERF    ++ ID +G H++LLPFG GRR CP + +    +   LA+++  FD+K+  P+GV    +D+ E PGL+  +  +L+ VP  R
Sbjct:  382 YTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFM---DNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKL--PEGVEVKDIDVEEAPGLTVNKKNELLLVPEMR 496          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.983e-20
Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPV 880
            Y I  GT + VN W++GR+P +WK+P EF PERF    +S ++ +G  ++LLPFG+GRRGCP + + +  +   LA+++  FD+K T     V + E PGL+S R   L  VPV
Sbjct:  389 YDIYPGTRIHVNAWAIGRNPDVWKDPDEFIPERFV---DSNVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDWKATEE---VSVEEAPGLTSHRKHPLHLVPV 496          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.500e-20
Identity = 50/120 (41.67%), Postives = 78/120 (65.00%), Query Frame = -1
Query:  521 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVARCAPS 880
            Y I KGT L  NLW + RDP +W +PLEF+PERF + ++ ++D+RG +++LLPFG+GRR C G+SL +  +   LA+++  FD    S +  VDM+E  G ++ +A  L  +   R +P+
Sbjct:  405 YHIKKGTRLIHNLWKIHRDPSVWSDPLEFKPERFLT-THKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAE-PVDMTEFFGFTNTKATPLEILVKPRQSPN 522          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.500e-20
Identity = 50/118 (42.37%), Postives = 77/118 (65.25%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPV 880
            Y IPK T + VN+W++ R+P +WK+P  F PERF    +S+ID +GL+++LLPFG+GRR CPG+ + M  +   L +++  FD+K+  P+G+    VD+ E  GL  P+   L  +PV
Sbjct:  379 YNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFM---DSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKL--PEGMKVADVDLEESYGLVCPKKIPLQLIPV 491          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.110e-19
Identity = 46/116 (39.66%), Postives = 72/116 (62.07%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVAR 880
            + IPKGT L VN+W++GRDP +W+NP EF P+RF  + N++ID RG  ++L+PFG GRR C G  L +  +   L +++  F +++ S    ++M E  GL+  +A  L  +   R
Sbjct:  387 HYIPKGTRLSVNIWAIGRDPSVWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFVWELPSSVIELNMDESFGLALQKAVPLAAMVTPR 502          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.110e-19
Identity = 49/118 (41.53%), Postives = 77/118 (65.25%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPV 880
            Y IPK T + VN+W++ R+P +WK+P  F PERF    +++ID +GL+++LLPFG+GRR CPG+ + M  +   L +++  FD+K+  P+G+    VD+ E  GL  P+   L  +PV
Sbjct:  379 YNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFM---DNQIDYKGLNFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWKL--PEGMEVEDVDLEESYGLVCPKKVPLELIPV 491          
The following BLAST results are available for this feature:
BLAST of CV884924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
C76A1_SOLME3.815e-2042.24Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C71DI_MENSP3.815e-2039.67Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR3.815e-2039.67Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71BH_ARATH3.815e-2043.22Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71BW_ARATH4.983e-2042.50Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH4.983e-2042.98Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C82A3_SOYBN8.500e-2041.67Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C71BC_ARATH8.500e-2042.37Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C75A7_EUSGR1.110e-1939.66Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71BD_ARATH1.110e-1941.53Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884924 ID=CV884924; Name=CV884924; organism=Citrus sinensis; type=EST; length=880bp
TGATATCAATTTTCTTGTAGTGCGAAGGATTTCTTATTCTAATAGTAGTG
ACAAGAAAGGATACATAAATAGATTGAGGCTATGATTCTTAAAAAAAAAG
AATTTTCAAAGAAATTATCGTGCATGATGGGTAACGTATCAATCAAATTA
GGTCCAAAATTGAATTCATCGTTTAGGTGTCCATAATGTCAAACACGTTG
AGGAAAATTTTAGATTTTCCGTTGAAATTTCAACGATCACTAATCGTTGA
TCTTGAAGTCATGCAAAGTATCATAGTCTTTTGAGTTTCAACCTAAGACG
TGGCCATATTGTGGACCATAAGAAATTTTCAAAGATCACCATGTCGCTAC
ATTGTTCAAGTTCTTGAATTTCAACGAAAGATGTAGAATTTTCTTCTACG
TGCGACAGCGACACCTTACTGTCCAACCACTTTGAGTTGAGTTAACCACA
CATTAAACAGAGACACTGACTGAACACTGCTAAAGACACTTTAATTTCAA
CGTACATCCGAATTTACGATACTAGGAGCACAACGTGCAACTGGCACGCA
CACAAGATCCTGTGCTCTTGGAGATGATAATCCTGGGCGTTCAGACATAT
CAACCACACCATCGGGACTCGTTACTTTGAAATCGAAACACTGAATCATA
GATGCTAGAGCTGTCGGCAACTCTTGCATGGCTAAAGAAAGGCCAGGGCA
GCCTCTTCTCCCAGTGCCAAATGGCAGCAATTGGTAATGCAATCCCCTAA
CATCAATCTCACTATTTGACTGTGAGAAGAATCGTTCTGGCTGAAATTCC
AACGGGTTCTTCCAAATTTTGGGGTCCCTACCCATGGACCAAAGGTTCAC
AAACAACAGAGTGCCTTTAGGAATTATGTA
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