CV884924

Overview
NameCV884924
Unique NameCV884924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.110e-19
Identity = 51/124 (41.13%), Postives = 73/124 (58.87%), Query Frame = -1
Query:  521 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPVARCAPS 880
            Y +  GT + +N W++GRD  +W+    F PERF   S   ID RG+H++L+PFG+GRRGCPG + A      ALA+++  FDFK+  P+GV    +DMSE  G +  +   L+ VP      S
Sbjct:  393 YDVASGTRVLINCWAIGRDSSVWEESETFLPERFLETS---IDYRGMHFELIPFGSGRRGCPGATFAAAIDELALATLVHKFDFKL--PNGVRVEDLDMSEGSGFTIHKKFPLLVVPTPHACTS 511          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.894e-19
Identity = 46/105 (43.81%), Postives = 69/105 (65.71%), Query Frame = -1
Query:  578 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGL 880
            Y IPKG+ + VN+W++ RDP +WKNP EF+PERF  +   ++D++G  ++LLPFG GRR CPG  L +  + + ++ ++  F +  T P G     +DMSE PGL
Sbjct:  381 YDIPKGSNVHVNVWAVARDPAVWKNPFEFRPERFLEE---DVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVW--TPPQGTKPEEIDMSENPGL 480          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.230e-19
Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFF-SQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPD--GVVDMSERPGLSSPRAQDLVCVPVAR 880
            Y IPKG+ L +N+W++ RDP  W +PLEF+PERF       ++DVRG  ++++PFG GRR C G++L ++ +   +A++I  F++ + S     +++M E  GL+  RA  LV  P  R
Sbjct:  386 YFIPKGSTLLLNVWAIARDPNAWADPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSGQLPEMLNMEEAYGLTLQRADPLVVHPRPR 504          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.230e-19
Identity = 46/105 (43.81%), Postives = 70/105 (66.67%), Query Frame = -1
Query:  578 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGL 880
            Y IPKG+ + VN+W++ RDP +WK+PLEF+PERF  +   ++D++G  ++LLPFG+GRR CPG  L +    + L  ++  F +  T P+G+    +DM E PGL
Sbjct:  382 YDIPKGSNVHVNVWAVARDPAVWKDPLEFRPERFLEE---DVDMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCW--TPPEGMKPEEIDMGENPGL 481          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.230e-19
Identity = 48/117 (41.03%), Postives = 75/117 (64.10%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVP 880
            Y +PK T + VN W++GRDP+ W +P+ F+PERF     S+IDV+G HY L+PFG GRR C GL L  + +  AL S+++ F++++  PDGV    ++M    G+++ +   L  +P
Sbjct:  391 YDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFL---GSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWEL--PDGVSPKSINMDGSMGVTARKRDSLKVIP 502          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.230e-19
Identity = 46/118 (38.98%), Postives = 71/118 (60.17%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTS--PDGVVDMSERPGLSSPRAQDLVCVPVAR 880
            Y IP  T + +N W++GR+PK W     F+PERF    NS ID RG  ++ +PFG GRR CPG++ A+  +   LA ++  FD+K+ +   +  +DM+E  G++  R  DL  +P+ R
Sbjct:  394 YEIPSKTRIIINAWAIGRNPKYWGETESFKPERFL---NSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKMKNEELDMTESNGITLRRQNDLCLIPITR 508          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.230e-19
Identity = 48/118 (40.68%), Postives = 76/118 (64.41%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPV 880
            Y IPK T + VN+W++ R+P +WK+P  F PERF    +++ID +GL+++ LPFG+GRR CPG+ + M  +   L +++  FD+K+  P+G+    VD+ E  GL  P+   L  +PV
Sbjct:  379 YDIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFM---DNQIDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKL--PEGMEVEDVDLEESYGLVCPKKVPLQLIPV 491          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.230e-19
Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVAR 880
            Y IP+   L VN WS+GRDP+ WKNP EF PERF    +  +D +G  ++LLPFG+GRR CPG+++A+  +   L +++  FD+ +      +DM E   L+  +   L  +PV R
Sbjct:  389 YDIPQKRALLVNAWSIGRDPESWKNPEEFNPERFI---DCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPEKKKDMDMEEAGDLTVDKKVPLELLPVIR 501          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19
Identity = 45/97 (46.39%), Postives = 67/97 (69.07%), Query Frame = -1
Query:  590 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSE 880
            Y I KGT L  NLW + RDP +W +PLEF+PERF S ++ ++DVRG +++LLPFG+GRR C G+SL +  +   LA+ +  F+    SP+  +D++E
Sbjct:  422 YHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLS-THKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEILNPSPES-IDVTE 516          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 44/105 (41.90%), Postives = 69/105 (65.71%), Query Frame = -1
Query:  578 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGL 880
            Y IPKG  + VN+W++ RDPK+W NPLE++PERF  ++   ID++G  +++LPFG GRR CPG  L +  + + +  ++  F++ +  P+G     V+M E PGL
Sbjct:  384 YDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEEN---IDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSL--PEGTRPEDVNMMESPGL 483          
The following BLAST results are available for this feature:
BLAST of CV884924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
C71A6_NEPRA1.110e-1941.13Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C98A3_ARATH1.894e-1943.81Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
F3PH_PETHY3.230e-1939.50Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C98A2_SOYBN3.230e-1943.81Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C76A2_SOLME3.230e-1941.03Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C71DA_SOYBN3.230e-1938.98Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71BB_ARATH3.230e-1940.68Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH3.230e-1940.52Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C82A1_PEA5.509e-1946.39Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C98A1_SORBI7.195e-1941.90Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884924 ID=CV884924; Name=CV884924; organism=Citrus sinensis; type=EST; length=880bp
TGATATCAATTTTCTTGTAGTGCGAAGGATTTCTTATTCTAATAGTAGTG
ACAAGAAAGGATACATAAATAGATTGAGGCTATGATTCTTAAAAAAAAAG
AATTTTCAAAGAAATTATCGTGCATGATGGGTAACGTATCAATCAAATTA
GGTCCAAAATTGAATTCATCGTTTAGGTGTCCATAATGTCAAACACGTTG
AGGAAAATTTTAGATTTTCCGTTGAAATTTCAACGATCACTAATCGTTGA
TCTTGAAGTCATGCAAAGTATCATAGTCTTTTGAGTTTCAACCTAAGACG
TGGCCATATTGTGGACCATAAGAAATTTTCAAAGATCACCATGTCGCTAC
ATTGTTCAAGTTCTTGAATTTCAACGAAAGATGTAGAATTTTCTTCTACG
TGCGACAGCGACACCTTACTGTCCAACCACTTTGAGTTGAGTTAACCACA
CATTAAACAGAGACACTGACTGAACACTGCTAAAGACACTTTAATTTCAA
CGTACATCCGAATTTACGATACTAGGAGCACAACGTGCAACTGGCACGCA
CACAAGATCCTGTGCTCTTGGAGATGATAATCCTGGGCGTTCAGACATAT
CAACCACACCATCGGGACTCGTTACTTTGAAATCGAAACACTGAATCATA
GATGCTAGAGCTGTCGGCAACTCTTGCATGGCTAAAGAAAGGCCAGGGCA
GCCTCTTCTCCCAGTGCCAAATGGCAGCAATTGGTAATGCAATCCCCTAA
CATCAATCTCACTATTTGACTGTGAGAAGAATCGTTCTGGCTGAAATTCC
AACGGGTTCTTCCAAATTTTGGGGTCCCTACCCATGGACCAAAGGTTCAC
AAACAACAGAGTGCCTTTAGGAATTATGTA
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