CV884924

Overview
NameCV884924
Unique NameCV884924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.397e-19
Identity = 49/115 (42.61%), Postives = 70/115 (60.87%), Query Frame = -1
Query:  533 IPKGTLLFVNLWSMGRDPKIWKNPLEFQPERF-FSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVAR 874
            +P GT   VN+WS+  DP IW++P EF+PERF   +   E+DVRG   +L PFG GRR CPG +L +  +   +A ++  F++ +   +  VD+SE   LS   A+ L CVPV R
Sbjct:  432 VPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEW-LPHAEHPVDLSEVLKLSCEMARPLHCVPVTR 545          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.397e-19
Identity = 46/114 (40.35%), Postives = 70/114 (61.40%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPV 880
            Y IP+ TLL V+ WS+GRDPK WKNP EF PERF    +  +D +G  ++ LPFG+GRR CPG++ A+  +   L +++  FD+K+      ++M E   ++  +   L  +PV
Sbjct:  388 YDIPRKTLLLVSAWSLGRDPKYWKNPEEFNPERFI---DCPVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLPEEMKDMNMEESGDVTIVKKVPLELLPV 498          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.397e-19
Identity = 50/118 (42.37%), Postives = 72/118 (61.02%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPV 880
            Y IP    + VN+ ++GRDPK+W NP EF PERF    +S +D RG HY+LLPFG+GRR CPG+ + +  +   L +++  FD+K+  PDG+    +D  E   L+  +   L  VPV
Sbjct:  387 YDIPPKRRILVNVSAIGRDPKLWTNPEEFDPERFM---DSSVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKL--PDGMTHKDIDTEEAGTLTIVKKVPLQLVPV 499          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.227e-18
Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIW-KNPLEFQPERFFSQSNSEIDVRG--LHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVAR 880
            Y IPK T++ +NLW++GRDP +W  +  EF+PERF     + ID+ G    +++LPFG GRR CPG ++A+  +   LA ++  FD++V      +DM E      PR   L+  P  R
Sbjct:  402 YYIPKKTMVIMNLWAIGRDPSVWGADASEFKPERFMQMEENGIDLSGGQSDFRMLPFGAGRRTCPGSAMAILTVEFTLAQLLHTFDWRVEGDPSELDMKEACATKMPRQTPLLAYPRLR 520          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.227e-18
Identity = 42/114 (36.84%), Postives = 71/114 (62.28%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPV 880
            Y IP+ T+L VN WS+GR+P++W+NP EF PERF    +  +D +G  +++LPFG+GR+ CPG++  +  +   L +++  FD+++   D  +DM E    +  +   L  VP+
Sbjct:  388 YDIPRKTILLVNAWSIGRNPELWENPEEFNPERFI---DCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRLAEEDKDIDMEEAGDATIVKKVPLELVPI 498          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.603e-18
Identity = 50/118 (42.37%), Postives = 72/118 (61.02%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPV 880
            Y IP    + VN+ ++GRDPK+W NP EF PERF    +S +D RG HY+LLPFG+GRR CPG+ + +  +   L +++  FD+K+  PDG+    +D  E   L+  +   L  VPV
Sbjct:  387 YDIPPKRRILVNVSAIGRDPKLWTNPKEFDPERFM---DSFVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKL--PDGMTHKDIDTEEAGTLTIVKKVPLKLVPV 499          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.094e-18
Identity = 52/120 (43.33%), Postives = 72/120 (60.00%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV-VD---MSERPGLSSPRAQDLVCVPVAR 880
            Y IPK   + VN W +GRDPK W +PL F PERF    NS +D RG  + L+PFG GRR CPGL +A Q +   +A+ +Q  D+ +  P+G+ VD   + E+ GL+  +   L  VP +R
Sbjct:  372 YTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFL---NSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCL--PNGMSVDHLIVEEKFGLTLQKEPPLFIVPKSR 486          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.094e-18
Identity = 49/118 (41.53%), Postives = 71/118 (60.17%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPV 880
            Y IP    + VN W++GRDP +W NP EF PERF    N+ +D RG H++LLPFG+GRR CPG+ L +  +   L +++  FD++  +PDG+    +D  E   L+  +   L  VPV
Sbjct:  387 YDIPPKRRILVNTWAIGRDPTLWINPEEFNPERFI---NNPVDYRGQHFELLPFGSGRRICPGMGLGITIVELGLLNLLYFFDWR--APDGMTHKDIDTEEAGILTVVKKVPLKLVPV 499          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.734e-18
Identity = 49/117 (41.88%), Postives = 70/117 (59.83%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVP 880
            Y IPK   + +N +++GRDPK W NP EF PERF    N+ I+ +G HY+LLPFG GRR CPG++L +  L   L +++  FD+ +  P G+    +DM E   L+  +   L  VP
Sbjct:  384 YHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFL---NTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSL--PSGMTIKDIDMEEDGALNIAKKVPLQLVP 495          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.571e-18
Identity = 49/120 (40.83%), Postives = 74/120 (61.67%), Query Frame = -1
Query:  521 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVARCAPS 880
            Y + KGT L  NL  +  D  +W NPLEF+PERF + ++ +ID++G H+QLLPFG GRR CPG++L +Q +   LAS +  F+    S +  +DM+E    ++ +A  L  +   R +PS
Sbjct:  400 YTVKKGTRLITNLSKIHTDHNVWSNPLEFKPERFLT-TDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSFEILNPSTE-PLDMTEVFRATNTKATPLEILIKPRLSPS 517          
The following BLAST results are available for this feature:
BLAST of CV884924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
C78A4_PINRA9.397e-1942.61Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71BP_ARATH9.397e-1940.35Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH9.397e-1942.37Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C75A1_PINTA1.227e-1838.66Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71B3_ARATH1.227e-1836.84Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71BJ_ARATH1.603e-1842.37Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C80B1_ESCCA2.094e-1843.33(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71BG_ARATH2.094e-1841.53Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71BU_ARATH2.734e-1841.88Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C82A2_SOYBN3.571e-1840.83Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884924 ID=CV884924; Name=CV884924; organism=Citrus sinensis; type=EST; length=880bp
TGATATCAATTTTCTTGTAGTGCGAAGGATTTCTTATTCTAATAGTAGTG
ACAAGAAAGGATACATAAATAGATTGAGGCTATGATTCTTAAAAAAAAAG
AATTTTCAAAGAAATTATCGTGCATGATGGGTAACGTATCAATCAAATTA
GGTCCAAAATTGAATTCATCGTTTAGGTGTCCATAATGTCAAACACGTTG
AGGAAAATTTTAGATTTTCCGTTGAAATTTCAACGATCACTAATCGTTGA
TCTTGAAGTCATGCAAAGTATCATAGTCTTTTGAGTTTCAACCTAAGACG
TGGCCATATTGTGGACCATAAGAAATTTTCAAAGATCACCATGTCGCTAC
ATTGTTCAAGTTCTTGAATTTCAACGAAAGATGTAGAATTTTCTTCTACG
TGCGACAGCGACACCTTACTGTCCAACCACTTTGAGTTGAGTTAACCACA
CATTAAACAGAGACACTGACTGAACACTGCTAAAGACACTTTAATTTCAA
CGTACATCCGAATTTACGATACTAGGAGCACAACGTGCAACTGGCACGCA
CACAAGATCCTGTGCTCTTGGAGATGATAATCCTGGGCGTTCAGACATAT
CAACCACACCATCGGGACTCGTTACTTTGAAATCGAAACACTGAATCATA
GATGCTAGAGCTGTCGGCAACTCTTGCATGGCTAAAGAAAGGCCAGGGCA
GCCTCTTCTCCCAGTGCCAAATGGCAGCAATTGGTAATGCAATCCCCTAA
CATCAATCTCACTATTTGACTGTGAGAAGAATCGTTCTGGCTGAAATTCC
AACGGGTTCTTCCAAATTTTGGGGTCCCTACCCATGGACCAAAGGTTCAC
AAACAACAGAGTGCCTTTAGGAATTATGTA
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