CV884924

Overview
NameCV884924
Unique NameCV884924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.571e-18
Identity = 52/120 (43.33%), Postives = 72/120 (60.00%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV-VD---MSERPGLSSPRAQDLVCVPVAR 880
            Y IPK   + VN W +GRDPK W +PL F PERF    NS +D RG  + L+PFG GRR CPGL +A Q +   +A+ +Q  D+ +  P+G+ VD   + E+ GL+  +   L  VP +R
Sbjct:  373 YTIPKDCQIMVNAWGIGRDPKTWIDPLTFSPERFL---NSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCL--PNGMSVDHLIVEEKFGLTLQKEPPLFIVPKSR 487          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.571e-18
Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = -1
Query:  545 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCV 880
            Y IPK T++ +N +++GRDPK WK P EF PERF    +S ID +G H++LLPFG GRR CPG++  +  +   L +++  FD+ +  P+G+    +DM E  G +  +   LV +
Sbjct:  384 YNIPKNTMIQINTYAIGRDPKYWKQPGEFIPERFL---DSPIDYKGQHFELLPFGAGRRICPGMATGITMVELGLLNLLYFFDWSL--PNGMTIEDIDMEEDEGFAIAKKVPLVLI 494          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.571e-18
Identity = 47/117 (40.17%), Postives = 72/117 (61.54%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVP 880
            Y IPK   + ++ +++GRDPK W NP EF PERF   +N+ I+ +G HY+LLPFG GRR CPG++L +  L   L +++  FD+ +  P+G+    +DM E   L+  +   L  +P
Sbjct:  386 YHIPKNAHIKISTYAIGRDPKCWTNPEEFNPERF---ANTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSL--PNGMTIKDIDMEEDGALTIAKKVPLELIP 497          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.664e-18
Identity = 45/120 (37.50%), Postives = 74/120 (61.67%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPVAR 880
            + IPK + + +N +++GRDP  W +P  F+P RF        D +G +++ +PFG+GRR CPG+ L +  L  A+A ++ CF +K+  PDG+    +DM++  GL++P+A  L  VP  R
Sbjct:  400 FFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVP--DFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKL--PDGMKPSELDMNDVFGLTAPKATRLFAVPTTR 515          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.664e-18
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKV---TSPDGVVDMSERPGLSSPRAQDLVCVP 880
            Y +P  T +FVN W++GRDP  W  P EF P+RF     S++D  G H++L+PFG GRR CPGL++    +   LA+++ C+D+ +     P+  V M E   L+  R   LV VP
Sbjct:  411 YDVPANTRVFVNAWAIGRDPASWPAPDEFNPDRFVG---SDVDYYGSHFELIPFGAGRRICPGLTMGETNVTFTLANLLYCYDWALPGAMKPED-VSMEETGALTFHRKTPLVVVP 522          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.091e-18
Identity = 46/120 (38.33%), Postives = 76/120 (63.33%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDG----VVDMSERPGLSSPRAQDLVCVPVAR 880
            Y IP+ T + VN++++GRDP +W+NP EF+PERF    +S +D RGL+++LLPFG+GRR CPG+++ +  +   L +++  FD+ +  P+G     +D+ E   +   +   L  VP  R
Sbjct:  386 YDIPEKTQIMVNVYAIGRDPDLWENPEEFKPERFV---DSSVDYRGLNFELLPFGSGRRICPGMTMGIATVELGLLNLLYFFDWGL--PEGRTVKDIDLEEEGAIIIGKKVSLELVPTRR 500          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.357e-17
Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVP 880
            Y IPK T++ +N +S+GRDP  W+NP +F PERF    +S ++ +G HY+LLPFG GRR CPG++  +  +   L +++  FD+ +  PDG+    +DM E       +   L  +P
Sbjct:  384 YNIPKNTMIEINTYSIGRDPNCWENPNDFNPERFI---DSPVEYKGQHYELLPFGAGRRICPGMATGITIVELGLLNVLYFFDWSL--PDGMKIEDIDMEEAGAFVVAKKVPLELIP 495          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.772e-17
Identity = 38/86 (44.19%), Postives = 60/86 (69.77%), Query Frame = -1
Query:  623 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKV 880
            Y IP  T +F+N W++GRDPK W+N  EF PERF    N+ +D +G  +QL+PFG GRRGCPG++  +  +  +LA+++  F++++
Sbjct:  386 YHIPAKTRVFINAWAIGRDPKSWENAEEFLPERFV---NNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWEL 468          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.315e-17
Identity = 42/96 (43.75%), Postives = 64/96 (66.67%), Query Frame = -1
Query:  593 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMS 880
            Y IP  T + +N++S+ RDPK+W NP EF P+RF    +S ID RGL+++LLPFG+GRR CPG++L +  +   L +++  FD+ V     V D++
Sbjct:  389 YDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRFL---DSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNVKDIN 481          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.948e-17
Identity = 41/114 (35.96%), Postives = 67/114 (58.77%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNS-EIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVP 880
            Y +P GT + V+ W++GRD   W+ P EF PERF  +  + ++ ++G   + +PFG+GRR CPG++     +   LA+++  FD++V      V M E  GL+  R + L+ VP
Sbjct:  419 YFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPGSGAGVSMEESFGLTLRRKEKLLLVP 532          
The following BLAST results are available for this feature:
BLAST of CV884924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
C80B2_ESCCA3.571e-1843.33(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C71BZ_ARATH3.571e-1840.52Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH3.571e-1840.17Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C84A1_ARATH4.664e-1837.50Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71E1_SORBI4.664e-1840.524-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71BN_ARATH6.091e-1838.33Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH1.357e-1738.46Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71A1_PERAE1.772e-1744.19Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71B7_ARATH2.315e-1743.75Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71C2_MAIZE3.948e-1735.96Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884924 ID=CV884924; Name=CV884924; organism=Citrus sinensis; type=EST; length=880bp
TGATATCAATTTTCTTGTAGTGCGAAGGATTTCTTATTCTAATAGTAGTG
ACAAGAAAGGATACATAAATAGATTGAGGCTATGATTCTTAAAAAAAAAG
AATTTTCAAAGAAATTATCGTGCATGATGGGTAACGTATCAATCAAATTA
GGTCCAAAATTGAATTCATCGTTTAGGTGTCCATAATGTCAAACACGTTG
AGGAAAATTTTAGATTTTCCGTTGAAATTTCAACGATCACTAATCGTTGA
TCTTGAAGTCATGCAAAGTATCATAGTCTTTTGAGTTTCAACCTAAGACG
TGGCCATATTGTGGACCATAAGAAATTTTCAAAGATCACCATGTCGCTAC
ATTGTTCAAGTTCTTGAATTTCAACGAAAGATGTAGAATTTTCTTCTACG
TGCGACAGCGACACCTTACTGTCCAACCACTTTGAGTTGAGTTAACCACA
CATTAAACAGAGACACTGACTGAACACTGCTAAAGACACTTTAATTTCAA
CGTACATCCGAATTTACGATACTAGGAGCACAACGTGCAACTGGCACGCA
CACAAGATCCTGTGCTCTTGGAGATGATAATCCTGGGCGTTCAGACATAT
CAACCACACCATCGGGACTCGTTACTTTGAAATCGAAACACTGAATCATA
GATGCTAGAGCTGTCGGCAACTCTTGCATGGCTAAAGAAAGGCCAGGGCA
GCCTCTTCTCCCAGTGCCAAATGGCAGCAATTGGTAATGCAATCCCCTAA
CATCAATCTCACTATTTGACTGTGAGAAGAATCGTTCTGGCTGAAATTCC
AACGGGTTCTTCCAAATTTTGGGGTCCCTACCCATGGACCAAAGGTTCAC
AAACAACAGAGTGCCTTTAGGAATTATGTA
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