CV884924

Overview
NameCV884924
Unique NameCV884924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.796e-17
Identity = 48/118 (40.68%), Postives = 71/118 (60.17%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIW-KNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVP 880
            Y IP GT + VN W++ RD K W  NP EF+PERF  +   E+D +G  Y+ +PFG+GRR CPG+ L    L    A+++  F+FK+  P+G+    ++M    GL+  ++Q L  VP
Sbjct:  384 YDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEK---EVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKL--PNGMKPDDINMDVMTGLAMHKSQHLKLVP 496          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.796e-17
Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDL--VCVP 880
            Y +P+ T++ VN W++ RDP+IW+ P +F P+R+     S+  V    Y+L+PFG GRR CPG  L  + +  AL S+IQCF+++    +  +DMSE  GL   +   L  +C P
Sbjct:  382 YDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRYNDGCGSDYYV----YKLMPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWENVKGE-EMDMSESTGLGMRKMDPLRAMCRP 491          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.796e-17
Identity = 46/121 (38.02%), Postives = 66/121 (54.55%), Query Frame = -1
Query:  524 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTS--PDGVVDMSERPGLSSPRAQDLVCVPVARCAP 880
            Y IP    + +N+WSMGR+P  W+ P  F PERF   S    D  G  ++ +PFG GRR CPGL+  +  +   LA ++  FD+K+        +DMSE  GL+  R  +L+ VP    +P
Sbjct:  379 YKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSR---DFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRKNNLLLVPTLYKSP 496          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.796e-17
Identity = 45/117 (38.46%), Postives = 68/117 (58.12%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVD----MSERPGLSSPRAQDLVCVP 880
            + IP  T + +N WS+GRDP  W++P  F+PERF   S    D  G  ++ +PFG G+R CPGL   +  +   LA ++  FD+K+  P G+ D    ++  PGLS PR +++  VP
Sbjct:  377 FYIPARTRILINAWSIGRDPLYWEDPDTFRPERFDEVSR---DFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKL--PQGMTDADLYVAGTPGLSGPRKKNVFLVP 488          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.796e-17
Identity = 48/126 (38.10%), Postives = 72/126 (57.14%), Query Frame = -1
Query:  521 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQS-NSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTS----PDGVVDMSERPGLSSPRAQDLVCVP-VARCAPS 880
            Y IP GT + VN W++ RDP  W    EF PERF  Q  ++E+D+ G   + +PFG GRR C G + A+  +   LA++I  FD+++ +        VDMS++ G++  R Q L  VP + +C  S
Sbjct:  409 YTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKLYLVPRIPKCVSS 534          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.500e-16
Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTS--PDGVVDMSERPGLSSPRAQDLVCVP 880
            Y IP    + +N+WSMGR+P  W+ P  F PERF   S    D  G  ++ +PFG GRR CPGL+  +  +   LA ++  FD+K+        +DMSE  GL+  R  +L+ VP
Sbjct:  379 YKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSR---DFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRKNNLLLVP 490          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.500e-16
Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTS--PDGVVDMSERPGLSSPRAQDLVCVP 880
            Y IP    + +N+WSMGR+P  W+ P  F PERF   S    D  G  ++ +PFG GRR CPGL+  +  +   LA ++  FD+K+        +DMSE  GL+  R  +L+ VP
Sbjct:  382 YTIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSR---DFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMNPSDMDMSEAEGLTGIRKNNLLLVP 493          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVD--MSERPGLSSPRAQDLVCVPV 880
            Y IPK T++ +N +++GRDP  W NP EF PERF    +S ID +G H++LLPFG GRR CPG++  M  +   L +++  FD+ +     + D  M E       +   L  VPV
Sbjct:  384 YNIPKNTMIEINTYAIGRDPNCWTNPNEFIPERFV---DSPIDYKGQHFELLPFGGGRRICPGMATGMTIVELGLLNVLYFFDWSLPYGMAIADINMEEAGAFVIAKKVPLELVPV 496          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.342e-16
Identity = 50/121 (41.32%), Postives = 70/121 (57.85%), Query Frame = -1
Query:  518 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVARCAPSI 880
            + I + T L VN +++ RDP  W++P EF+PERF  Q   E + R L +  + FG+GRRGCPG +LA   + TA+ +M+QCFD  +      V M E  GL+   A  L C+ V R  P I
Sbjct:  389 FYIAEKTTLVVNAYAVMRDPTTWEDPDEFKPERFLRQ---EEERRALKH--IAFGSGRRGCPGSNLATIFIGTAIGTMVQCFDLSIKGDK--VKMDEVGGLNLTMAHPLECILVPRTQPFI 502          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.342e-16
Identity = 45/116 (38.79%), Postives = 69/116 (59.48%), Query Frame = -1
Query:  545 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCV 880
            Y IP  T + VN+W++GRDPK W +   F+PERF       ID  G +++ LPFG GRR CPG+S  +  +   LA ++  FD+K+  P G+    +D++E  G+++ R  DL  +
Sbjct:  384 YTIPVKTKVMVNVWALGRDPKYWDDAESFKPERF---EQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKL--PTGMEPKDLDLTESAGITAARKGDLYLI 494          
The following BLAST results are available for this feature:
BLAST of CV884924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
C83A1_ARATH8.796e-1740.68Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C81F1_ARATH8.796e-1739.13Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C7D95_MENSP8.796e-1738.02Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D94_MENGR8.796e-1738.46Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C71C1_MAIZE8.796e-1738.10Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C7D95_MENGR1.500e-1639.13Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71DD_MENPI1.500e-1639.13Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71BL_ARATH2.559e-1639.66Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C75AK_ARATH3.342e-1641.32Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C71D7_SOLCH3.342e-1638.79Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884924 ID=CV884924; Name=CV884924; organism=Citrus sinensis; type=EST; length=880bp
TGATATCAATTTTCTTGTAGTGCGAAGGATTTCTTATTCTAATAGTAGTG
ACAAGAAAGGATACATAAATAGATTGAGGCTATGATTCTTAAAAAAAAAG
AATTTTCAAAGAAATTATCGTGCATGATGGGTAACGTATCAATCAAATTA
GGTCCAAAATTGAATTCATCGTTTAGGTGTCCATAATGTCAAACACGTTG
AGGAAAATTTTAGATTTTCCGTTGAAATTTCAACGATCACTAATCGTTGA
TCTTGAAGTCATGCAAAGTATCATAGTCTTTTGAGTTTCAACCTAAGACG
TGGCCATATTGTGGACCATAAGAAATTTTCAAAGATCACCATGTCGCTAC
ATTGTTCAAGTTCTTGAATTTCAACGAAAGATGTAGAATTTTCTTCTACG
TGCGACAGCGACACCTTACTGTCCAACCACTTTGAGTTGAGTTAACCACA
CATTAAACAGAGACACTGACTGAACACTGCTAAAGACACTTTAATTTCAA
CGTACATCCGAATTTACGATACTAGGAGCACAACGTGCAACTGGCACGCA
CACAAGATCCTGTGCTCTTGGAGATGATAATCCTGGGCGTTCAGACATAT
CAACCACACCATCGGGACTCGTTACTTTGAAATCGAAACACTGAATCATA
GATGCTAGAGCTGTCGGCAACTCTTGCATGGCTAAAGAAAGGCCAGGGCA
GCCTCTTCTCCCAGTGCCAAATGGCAGCAATTGGTAATGCAATCCCCTAA
CATCAATCTCACTATTTGACTGTGAGAAGAATCGTTCTGGCTGAAATTCC
AACGGGTTCTTCCAAATTTTGGGGTCCCTACCCATGGACCAAAGGTTCAC
AAACAACAGAGTGCCTTTAGGAATTATGTA
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