CV884924

Overview
NameCV884924
Unique NameCV884924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.342e-16
Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = -1
Query:  575 IPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV--VDMSERPGLS 874
            IP  T + VN  S+  DP  W+NP EF PERF     S ID +G H+++LPFG GRRGCPG++ AM  +  ALA+++  FD+++    G+  +DM E  G++
Sbjct:  385 IPAKTRVLVNAKSIAMDPCCWENPNEFLPERFLV---SPIDFKGQHFEMLPFGVGRRGCPGVNFAMPVVELALANLLFRFDWELPLGLGIQDLDMEEAIGIT 483          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.365e-16
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVAR 880
            Y +P+GT L VN W++ RDP  W +P  F+PERF  +  ++        +LL FG GRR CPG  LA + +  AL S+IQCF+++    +  VDM E  G + P+A  L  +  AR
Sbjct:  388 YDMPRGTTLLVNAWAIHRDPNTWDDPDSFKPERFEKEEEAQ--------KLLAFGLGRRACPGSGLAQRIVGLALGSLIQCFEWERVG-NVEVDMKEGVGNTVPKAIPLKAICKAR 494          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.365e-16
Identity = 46/110 (41.82%), Postives = 67/110 (60.91%), Query Frame = -1
Query:  554 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQ-SNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDL 880
            Y +P GT   VN W++ RDP +WK+PLEF PERF +   ++E  + G   +L PFG+GRR CPG +L    +   +AS++  F++ V S +  VD++E   LSS  A  L
Sbjct:  406 YHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEW-VPSDEKGVDLTEVLKLSSEMANPL 514          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.701e-16
Identity = 45/117 (38.46%), Postives = 69/117 (58.97%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVP 880
            Y IPK T++ +N +++GRDPK W  P EF PERF    ++ I+ +G H++LLPFG GRR CPG++  +  +   L S++  FD+ +  P+G+    +DM E       +   L  VP
Sbjct:  382 YSIPKNTMIQINTYTIGRDPKNWTKPDEFIPERFV---DNPIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWSL--PNGMTTKDIDMEEDGAFVIAKKVSLELVP 493          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.446e-16
Identity = 43/114 (37.72%), Postives = 66/114 (57.89%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPV 880
            Y IP  + + VN W++GRDP  W  P +F P+RF     S++D +G  ++ LPFG GRR CPG++ A+  +   LA ++  FD++  S    ++M E  G++  R  DL   PV
Sbjct:  379 YTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLE---SKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQ--SNTEKLNMKESRGVTVRREDDLYLTPV 487          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.446e-16
Identity = 37/84 (44.05%), Postives = 60/84 (71.43%), Query Frame = -1
Query:  629 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDF 880
            Y IP  T + +N++++ RDPK+W NP EF P+RF    +S ID +GL+++LLPFG+GRR CPG+++ +  +  AL +++  FD+
Sbjct:  383 YDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFL---DSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDW 463          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.446e-16
Identity = 42/118 (35.59%), Postives = 72/118 (61.02%), Query Frame = -1
Query:  539 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPV 880
            Y +P+ T + VN+W++   P IWK+P  F PERF    +++ D +GL+++LLPFG+GRR CPG+ + +  +   L +++  FD+K+  P+G+    + + E  GL   +   L  +PV
Sbjct:  379 YDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFI---DNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKL--PNGMKAEELSIEENYGLICVKKLPLEAIPV 491          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.270e-15
Identity = 44/115 (38.26%), Postives = 63/115 (54.78%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTS--PDGVVDMSERPGLSSPRAQDLVCVP 880
            Y IP    + +N+WSMGR+P  W+ P  F PERF   S    D  G  ++ +PFG GRR CPGL+  +  +   LA ++  FD+K+        +DMSE  GL+     +L+ VP
Sbjct:  380 YTIPNKARIMINVWSMGRNPLYWEKPDTFWPERFDQVSK---DFMGNDFEFVPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGILKNNLLLVP 491          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.270e-15
Identity = 37/84 (44.05%), Postives = 58/84 (69.05%), Query Frame = -1
Query:  629 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDF 880
            Y IP  T + +N +++ RDPK+W NP EF P+RF    +S ID RGL+++LLPFG+GRR CPG+++ +  +   L +++  FD+
Sbjct:  383 YDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFL---DSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDW 463          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.659e-15
Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = -1
Query:  575 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLS 880
            Y +P+ T++ +N W++ RDP++W     F+PERF  +   E        +L+ FG GRR CPG  LA++ +   LA +IQCFD+K+ + D  +D++ER G +
Sbjct:  384 YKVPQDTIVLINAWAIHRDPELWTEATTFKPERFEKKGELE--------KLIAFGMGRRACPGEGLAIRAISMTLALLIQCFDWKLINGD-KIDLAERDGFT 476          
The following BLAST results are available for this feature:
BLAST of CV884924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
C71A9_SOYBN3.342e-1644.12Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C81D1_ARATH4.365e-1640.52Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C78A3_SOYBN4.365e-1641.82Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C71B5_ARATH5.701e-1638.46Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71DC_CATRO7.446e-1637.72Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71BT_ARATH7.446e-1644.05Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR7.446e-1635.59Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71DF_MENPI1.270e-1538.26Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71BS_ARATH1.270e-1544.05Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C81E1_GLYEC1.659e-1538.24Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884924 ID=CV884924; Name=CV884924; organism=Citrus sinensis; type=EST; length=880bp
TGATATCAATTTTCTTGTAGTGCGAAGGATTTCTTATTCTAATAGTAGTG
ACAAGAAAGGATACATAAATAGATTGAGGCTATGATTCTTAAAAAAAAAG
AATTTTCAAAGAAATTATCGTGCATGATGGGTAACGTATCAATCAAATTA
GGTCCAAAATTGAATTCATCGTTTAGGTGTCCATAATGTCAAACACGTTG
AGGAAAATTTTAGATTTTCCGTTGAAATTTCAACGATCACTAATCGTTGA
TCTTGAAGTCATGCAAAGTATCATAGTCTTTTGAGTTTCAACCTAAGACG
TGGCCATATTGTGGACCATAAGAAATTTTCAAAGATCACCATGTCGCTAC
ATTGTTCAAGTTCTTGAATTTCAACGAAAGATGTAGAATTTTCTTCTACG
TGCGACAGCGACACCTTACTGTCCAACCACTTTGAGTTGAGTTAACCACA
CATTAAACAGAGACACTGACTGAACACTGCTAAAGACACTTTAATTTCAA
CGTACATCCGAATTTACGATACTAGGAGCACAACGTGCAACTGGCACGCA
CACAAGATCCTGTGCTCTTGGAGATGATAATCCTGGGCGTTCAGACATAT
CAACCACACCATCGGGACTCGTTACTTTGAAATCGAAACACTGAATCATA
GATGCTAGAGCTGTCGGCAACTCTTGCATGGCTAAAGAAAGGCCAGGGCA
GCCTCTTCTCCCAGTGCCAAATGGCAGCAATTGGTAATGCAATCCCCTAA
CATCAATCTCACTATTTGACTGTGAGAAGAATCGTTCTGGCTGAAATTCC
AACGGGTTCTTCCAAATTTTGGGGTCCCTACCCATGGACCAAAGGTTCAC
AAACAACAGAGTGCCTTTAGGAATTATGTA
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