CV884924

Overview
NameCV884924
Unique NameCV884924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.826e-15
Identity = 44/118 (37.29%), Postives = 68/118 (57.63%), Query Frame = -1
Query:  533 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQS--NSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVAR 880
            + IP+ T LFVN++++ RDP  W++P EF+PERF + S    E + R    + +PFG+GRR CPG  LA   + + +  M+Q FD+ +      ++M E   ++   A  L C PV R
Sbjct:  392 FYIPEKTRLFVNVYAIMRDPDFWEDPEEFKPERFLASSRLGEEDEKREDMLKYIPFGSGRRACPGSHLAYTVVGSVIGMMVQHFDWIIKGEK--INMKEGGTMTLTMAHPLKCTPVPR 507          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.826e-15
Identity = 39/100 (39.00%), Postives = 56/100 (56.00%), Query Frame = -1
Query:  581 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPG 880
            Y IP  + + VN W +  +P  WK P EF+PERFF +  S ++  G  ++ +PFG GRR CPG+ LA+  L   +  M+Q F+         VD SE+ G
Sbjct:  388 YDIPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEE-SHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKVDTSEKGG 486          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.303e-15
Identity = 39/100 (39.00%), Postives = 56/100 (56.00%), Query Frame = -1
Query:  581 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPG 880
            Y IP  + + VN W +  +P  WK P EF+PERFF +  S ++  G  ++ LPFG GRR CPG+ LA+  L   L  ++Q F+         +D SE+ G
Sbjct:  388 YDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEE-SHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGG 486          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.303e-15
Identity = 35/84 (41.67%), Postives = 58/84 (69.05%), Query Frame = -1
Query:  629 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDF 880
            Y +P  T + VN+++MGRDPK+W+N  EF P+RF    +S +D +G +Y+ +PFG+GRR CPG+++    +  AL +++  FD+
Sbjct:  383 YDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFL---DSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDW 463          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.404e-14
Identity = 39/100 (39.00%), Postives = 56/100 (56.00%), Query Frame = -1
Query:  581 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPG 880
            Y IP  + + VN W +  +P  WK P EF+PERFF +  S ++  G  ++ LPFG GRR CPG+ LA+  L   L  ++Q F+         +D SE+ G
Sbjct:  389 YDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEE-SLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGG 487          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.404e-14
Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = -1
Query:  542 IPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSE----IDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVP 874
            + KGT + VN W++ R P+ W +P EF+PERF     S     +D RG  ++ +PFG+GRR CPG +  +  L   +A ++  FD+ +  PDG+    +DM    G +  R   L  VP
Sbjct:  391 VTKGTKVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSL--PDGMRPEELDMDTVVGSTMRRRNHLHLVP 507          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.404e-14
Identity = 40/118 (33.90%), Postives = 63/118 (53.39%), Query Frame = -1
Query:  527 IIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFF-SQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVARCA 877
            ++P GT   VN+W++  D  +W +P  F PERF  S+  +++DVRG+  +L PFG GRR CPG +L +  +   +A ++  F + +      V + E   LS      LV   + R A
Sbjct:  430 VVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIPRTA 547          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.404e-14
Identity = 43/117 (36.75%), Postives = 68/117 (58.12%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVP 880
            Y IP  + + VN +++G D K W  P  F PERF    +S ID +G +++ LPFG GRR CPG++  M  +   LA ++  FD+  T P G+    +D++E  G++  + +DL  +P
Sbjct:  370 YHIPAKSTVLVNTFAIGTDSKYWAEPERFCPERFI---DSSIDYKGTNFEHLPFGAGRRICPGINYGMANVELVLALLLYHFDW--TLPKGIKNEDLDLTEEFGVTVSKKEDLCLIP 481          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.404e-14
Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVP 880
            Y IP  + + VN W++GRDP++W     F PERF  +S   I+ +   ++ +PFG GRR CPGL+  +  +   LA ++  FD+K+  P G     + M+E  G++  R  DL  +P
Sbjct:  380 YHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIERS---IEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKL--PKGTKNEDLGMTEIFGITVARKDDLYLIP 491          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.404e-14
Identity = 49/123 (39.84%), Postives = 70/123 (56.91%), Query Frame = -1
Query:  536 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERF----FSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTS--PDGV--VDMSERPGLSSPRAQDLVCVPVA 880
            Y IP    + VN W++GRDP +W+ P EF PERF    + +SNS     G  ++ LPFG+GRR CPG +  +  +   LA+++  FD++V +   DG   V M E+ GL   R + L  VP A
Sbjct:  414 YHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNS---YSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFGLMLRRNELLYLVPRA 533          
The following BLAST results are available for this feature:
BLAST of CV884924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
THAD_ARATH4.826e-1537.29Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
TCMO_ARATH4.826e-1539.00Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
TCMO_PHAAU6.303e-1539.00Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
C71BF_ARATH6.303e-1541.67Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
TCMO_SOYBN1.404e-1439.00Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
C99A1_SORBI1.404e-1436.13Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C78A1_MAIZE1.404e-1433.90Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C71DB_LOTJA1.404e-1436.75Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71D9_SOYBN1.404e-1435.90Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71C3_MAIZE1.404e-1439.84Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884924 ID=CV884924; Name=CV884924; organism=Citrus sinensis; type=EST; length=880bp
TGATATCAATTTTCTTGTAGTGCGAAGGATTTCTTATTCTAATAGTAGTG
ACAAGAAAGGATACATAAATAGATTGAGGCTATGATTCTTAAAAAAAAAG
AATTTTCAAAGAAATTATCGTGCATGATGGGTAACGTATCAATCAAATTA
GGTCCAAAATTGAATTCATCGTTTAGGTGTCCATAATGTCAAACACGTTG
AGGAAAATTTTAGATTTTCCGTTGAAATTTCAACGATCACTAATCGTTGA
TCTTGAAGTCATGCAAAGTATCATAGTCTTTTGAGTTTCAACCTAAGACG
TGGCCATATTGTGGACCATAAGAAATTTTCAAAGATCACCATGTCGCTAC
ATTGTTCAAGTTCTTGAATTTCAACGAAAGATGTAGAATTTTCTTCTACG
TGCGACAGCGACACCTTACTGTCCAACCACTTTGAGTTGAGTTAACCACA
CATTAAACAGAGACACTGACTGAACACTGCTAAAGACACTTTAATTTCAA
CGTACATCCGAATTTACGATACTAGGAGCACAACGTGCAACTGGCACGCA
CACAAGATCCTGTGCTCTTGGAGATGATAATCCTGGGCGTTCAGACATAT
CAACCACACCATCGGGACTCGTTACTTTGAAATCGAAACACTGAATCATA
GATGCTAGAGCTGTCGGCAACTCTTGCATGGCTAAAGAAAGGCCAGGGCA
GCCTCTTCTCCCAGTGCCAAATGGCAGCAATTGGTAATGCAATCCCCTAA
CATCAATCTCACTATTTGACTGTGAGAAGAATCGTTCTGGCTGAAATTCC
AACGGGTTCTTCCAAATTTTGGGGTCCCTACCCATGGACCAAAGGTTCAC
AAACAACAGAGTGCCTTTAGGAATTATGTA
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