CV884923

Overview
NameCV884923
Unique NameCV884923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1841 contig Csv1_Contig1841:45..957. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.131e-30
Identity = 86/236 (36.44%), Postives = 118/236 (50.00%), Query Frame = 3
Query:   48 LLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHE-GKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDC-SSPRELKVIFC 746
            LL  +Y  A+ I  + NNCP+ VW A  P  G   L RG  ++ +       AP      RIW RTGC + A G+ +C TGDCG  L+C G G   P TLA+++L    N L  + +SLVDGFN+PMT  P +   G C  + C A++   CP+ L+V   PG      C + C  FG  + CC     +   C  +  S+FFK  CP   +Y  D P+    C       +V+FC
Sbjct:   13 LLCVTYTYAATI-EVRNNCPYTVWAASTPIGGGRRLNRGQTWVIN-------APRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWG-KPPNTLAEYALDQFSN-LDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKV---PG-----GCNNPCTTFGGQQYCC-----TQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFC 225          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.929e-30
Identity = 81/220 (36.82%), Postives = 109/220 (49.55%), Query Frame = 3
Query:   96 NNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTP-HEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDC-SSPRELKVIFC 746
            NNCP+ VW A  P  G   L+RG  ++ +       AP      RIW RT C +   G+ SC TGDCG  L+C G G   P TLA+++L    N L  + +SLVDGFN+PMT  P +   G C  + C A++   CP +L+V   PG      C + C  FG  + CC     +   C  +  S FFK  CP   +Y  D P+    C S     +V+FC
Sbjct:   20 NNCPYTVWAASTPIGGGRRLDRGQTWVIN-------APRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTGWG-KPPNTLAEYALDQFSN-LDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRV---PG-----GCNNPCTTFGGQQYCC-----TQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFC 217          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.929e-30
Identity = 83/249 (33.33%), Postives = 120/249 (48.19%), Query Frame = 3
Query:    6 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSG-RIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            M++   + +SA + +             ++NNCPF VW A  P  G   L+RG  ++ +        P     G R+W RTGC +   G+  C TGDC   L+C   G   P TLA+++L+   N+L  + +SLVDGFNV M  +P  G G    + C AD+   CP  L  R+P G      C + C  F TD+ CC +       C  ++FS+FFK  CP   +Y  D  +    C +    KV+FC
Sbjct:    1 MSTFKSLSLSALLFIAFLFTCARGATFNIINNCPFTVWAAAVPGGGKR-LDRGQNWIIN--------PGAGTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFG-QPPNTLAEYALNQ-FNNLDFFDISLVDGFNVAMEFSPTSG-GCTRGIKCTADINGQCPNEL--RAPGG------CNNPCTVFKTDQYCCNSG-----NCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFC 224          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.785e-29
Identity = 77/220 (35.00%), Postives = 106/220 (48.18%), Query Frame = 3
Query:   90 LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            +VN C + VW A  P  G   L+ G  +  ++     P   Q    RIW RT C +   G+ +C TGDC   LEC G G A P TLA+F+L+  + D     +SLVDGFN+PM  +P  G   C  + C A +   CP  L+ +          C + C    T+E CC N    P +C  +  S FFK  CP   +Y  D P+ +  C S    +V+FC
Sbjct:   30 IVNKCTYTVWAAASPGGGRR-LDSGQSWSINVN----PGTVQ---ARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKA-PNTLAEFALNQPNQDFVD--ISLVDGFNIPMEFSPTNGG--CRNLRCTAPINEQCPAQLKTQG--------GCNNPCTVIKTNEYCCTN---GPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRVVFC 225          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.751e-29
Identity = 82/235 (34.89%), Postives = 116/235 (49.36%), Query Frame = 3
Query:   45 LLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            LLL+S+   A+F   ++N C + VW A  P  G   L+ G  +            A     RIW RT C + + G+  C TGDC   L+C G G   P TLA+++L+   N+L  Y +SLVDGFN+PM  +P      C  + C AD+   CP  L  R+P G      C + C  F T++ CC N   S   C  + +S FFK  CP   +Y  D P+    C++    +V+FC
Sbjct:   14 LLLISTATAATF--EILNQCSYTVWAAASPGGGRR-LDAGQSW-------RLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWG-QPPNTLAEYALNQ-FNNLDFYDISLVDGFNIPMEFSPTSSN--CHRILCTADINGQCPNVL--RAPGG------CNNPCTVFQTNQYCCTNGQGS---CSDTEYSRFFKQRCPDAYSYPQDDPTSTFTCTN-TNYRVVFC 222          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.079e-28
Identity = 88/248 (35.48%), Postives = 118/248 (47.58%), Query Frame = 3
Query:    6 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAH-GKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            MA+T+  F     LLLL+    A+F   +VN C + VW A   + G   L+ GG  L+S    +         G+IWART C +   G+  C TGDCG  L+C   G   P TLA+FSL+    D     +S + GFNVPM  +P   +G C  V C AD++  CP  L+    PG G    C   C  F T E CC     +   C  + +S FFK  CP   +Y  D P+ +  C      +V FC
Sbjct:    1 MAATTCFFFLFPFLLLLTLSRAATF--EIVNRCSYTVWAAA--SKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRFG-RPPTTLAEFSLNQYGKDYID--ISNIKGFNVPMDFSPTT-RG-CRGVRCAADIVGQCPAKLKA---PGGG----CNDACTVFQTSEYCC-----TTGKCGPTEYSRFFKRLCPDAFSYVLDKPTTV-TCPGSSNYRVTFC 226          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.252e-28
Identity = 75/220 (34.09%), Postives = 100/220 (45.45%), Query Frame = 3
Query:   90 LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            +VN C + VW A  P         GG  L+S    S          RIW RT C +   G+ +C TGDC   LEC G G   P TLA+F+L+  + D     +SLVDGFN+PM  +P  G   C  + C A +   CP  L+ +          C + C    T+E CC N    P +C  +  S FFK  CP   +Y  D P  +  C      +V+FC
Sbjct:   30 IVNQCTYTVWAAASPG--------GGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYG-KPPNTLAEFALNQPNQDFVD--ISLVDGFNIPMEFSPTNGG--CRNLRCTAPINEQCPAQLKTQG--------GCNNPCTVIKTNEFCCTN---GPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFC 225          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.440e-25
Identity = 78/220 (35.45%), Postives = 102/220 (46.36%), Query Frame = 3
Query:   90 LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAH-GKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            +VN C + VW A   + G   L+ GG  L+S    +         G+IWART C +   G   C TGDCG  L C   G   P TLA+FSL+    D     +S + GFNVPM  +P   +G C  V C AD++  CP  L+    PG G    C   C  F T E CC     +   C  + +S FFK  CP   +Y  D P+ +  C      +V FC
Sbjct:    5 IVNRCSYTVWAAA--SKGDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFG-RPPTTLAEFSLNQYGKDYID--ISNIKGFNVPMNFSPTT-RG-CRGVRCAADIVGQCPAKLKA---PGGG----CNDACTVFQTSEYCC-----TTGKCGPTEYSRFFKRLCPDAFSYVLDKPTTV-TCPGSSNYRVTFC 204          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.173e-19
Identity = 60/140 (42.86%), Postives = 81/140 (57.86%), Query Frame = 3
Query:   12 STSPIFISATILLLLSSYAKASFILT--LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPM 425
            +TSP+     + LLL+ +A  +   T  + NNC F +WPA     G PV   GGF L S    S   PA   +GRIWARTGC++  G  SC TGDCG +L C+ L G  PATLA++++  G      Y +S++DGFN+ M
Sbjct:    2 ATSPV-----LFLLLAVFAAGASAATFNIKNNCGFTIWPA-----GIPV--GGGFALGSGQTSSINVPAGTQAGRIWARTGCSFNGGSGSCQTGDCGGQLSCS-LSGRPPATLAEYTIGGGSTQ-DFYDISVIDGFNLAM 127          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.532e-19
Identity = 59/133 (44.36%), Postives = 77/133 (57.89%), Query Frame = 3
Query:   33 SATILLLLSSYAKASFILT--LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPM 425
            SA + LLL+ +A  +   T  + NNC   +WPA     G PV   GGF L S    S   PA   +GRIWARTGC++  G  SC TGDCG +L C+ L G  PATLA+F++  G      Y +S++DGFN+ M
Sbjct:    4 SAVLFLLLAVFAAGASAATFNIKNNCGSTIWPA-----GIPV--GGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNGGSGSCQTGDCGGQLSCS-LSGRPPATLAEFTIGGGSTQ-DFYDISVIDGFNLAM 127          
The following BLAST results are available for this feature:
BLAST of CV884923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
NP24_SOLLC1.131e-3036.44Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
TPM1_SOLLC1.929e-3036.82Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
TLP_ACTDE1.929e-3033.33Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
PRR1_TOBAC2.785e-2935.00Pathogenesis-related protein R major form OS=Nicot... [more]
OSL3_ARATH4.751e-2934.89Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
THM2_THADA3.079e-2835.48Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
PRR2_TOBAC5.252e-2834.09Pathogenesis-related protein R minor form OS=Nicot... [more]
THM1_THADA2.440e-2535.45Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
TLP_WHEAT1.173e-1942.86Thaumatin-like protein PWIR2 OS=Triticum aestivum ... [more]
PR1C_HORVU1.532e-1944.36Pathogenesis-related protein 1C OS=Hordeum vulgare... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884923 ID=CV884923; Name=CV884923; organism=Citrus sinensis; type=EST; length=913bp
ACGAAATGGCCTCAACTTCGCCCATTTTCATTTCAGCAACTATCCTTCTT
CTCCTCAGCTCCTACGCCAAAGCAAGCTTCATACTGACCCTAGTCAACAA
CTGCCCCTTCCCCGTCTGGCCGGCCATCCAGCCCAACGCCGGCCACCCAG
TCCTCGAACGTGGCGGCTTCTATCTCCATAGCCTCACCCACCGCTCCTTC
CCCGCTCCGGCCCAGCACTGGTCGGGCCGGATCTGGGCCAGAACCGGCTG
CACCTACGCCCACGGCAAATTCTCCTGCGTCACGGGCGACTGCGGCCACC
GCTTGGAATGCAACGGACTCGGCGGGGCGACTCCAGCCACCCTGGCCCAG
TTCAGCCTCCACCACGGCCACAACGACCTCTCCTCCTACGGCGTCTCTCT
AGTCGACGGCTTCAACGTCCCCATGACTGTCACCCCGCACGAGGGCAAGG
GCGTCTGTCCGGTAGTGGGTTGTCGCGCTGACCTGCTAGCCACGTGTCCT
CAGAACCTGCAGGTGAGGTCACCGCCGGGTCACGGCCGCGTGGTGGCATG
TAAGAGTGGGTGTGAGGCGTTTGGTACGGACGAGCTGTGTTGTAGGAACC
ATTACAACAGTCCGCAGACATGCCGGGCTTCGAGCTTTTCGGAGTTCTTC
AAGCACGCTTGTCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCT
CATGCATGACTGCTCCTCGCCACGTGAGCTAAAAGTTATTTTCTGTCACT
AGAGAAGCATGAGAATAATAATAAGCTGGAGCATCAAGCTTCACAGTGCT
TAGGATTGTTGTGTTTGTTTTCGTCAATTAGCAGTATCTTGCTTTTTAAT
TAATCTCGTAACTAAAAAGAGAAATTAAAAATGATCAATGTGAGCTTGTG
TCATGTTGGGTGT
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