CV884923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.532e-19 Identity = 59/133 (44.36%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 33 SATILLLLSSYAKASFILT--LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPM 425 SA + LLL+ +A + T + NNC +WPA G PV GGF L S S PA +GRIWARTGC++ G SC TGDCG +L C+ L G PATLA+F++ G Y +S++DGFN+ M Sbjct: 4 SAVLFLLLAVFAAGASAATFNIKNNCGSTIWPA-----GIPV--GGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNGGSGSCQTGDCGGQLSCS-LSGQPPATLAEFTIGGGSTQ-DFYDISVIDGFNLAM 127
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: RST3_AVESA (Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.928e-19 Identity = 60/150 (40.00%), Postives = 83/150 (55.33%), Query Frame = 3 Query: 33 SATILLLLSSYAKASFILT--LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGV-CPVVGC 473 SA + LLL+ +A + T + NNC F VWPA G PV GGF L+S + PA +GRIW RTGC++ +G+ SC TGDC L C G PATLA++++ G D Y +S++DG+N+ M + G + C GC Sbjct: 5 SAVLFLLLAVFAAGASAATFRITNNCGFTVWPA-----GIPV--GGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNNGRGSCATGDCAGALSCTLSG--QPATLAEYTI-GGSQDF--YDISVIDGYNLAMDFSCSTGVALKCRDSGC 142
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.297e-18 Identity = 57/133 (42.86%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 33 SATILLLLSSYAKASFILT--LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPM 425 SA + LLL+ +A + T + NNC F VWPA G PV GGF L+S + PA +GRIW RTGC++ +G+ SC TGDC L C G PATLA++++ G D Y +S++DGFN+ M Sbjct: 5 SAVLFLLLAVFAAGASAATFRITNNCGFTVWPA-----GIPV--GGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNNGRGSCATGDCAGALSCTLSG--QPATLAEYTI-GGSQDF--YDISVIDGFNLAM 125
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18 Identity = 55/133 (41.35%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 33 SATILLLLSSYAKASFILT--LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPM 425 SA + LL+ +A + T + NNC F VWPA G PV GGF L+S + PA +GRIW RTGC++ +G+ SC TGDC L C G PATLA++++ G D Y +S++DG+N+ M Sbjct: 5 SAVLFFLLAVFAAGASAATFRITNNCGFTVWPA-----GIPV--GGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNNGRGSCATGDCAGALSCTLSG--QPATLAEYTI-GGSQDF--YDISVIDGYNLAM 125
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.531e-16 Identity = 53/147 (36.05%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 9 ASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEG 446 A++S + + + L + A A+ T+ N C F VWPA P G L G + + PA SGR+W RTGC++ G+ SC TGDC L C L G P TLA+F++ G D Y +S++DG+NV M+ + G Sbjct: 5 ATSSAVLVVVLVATLAAGGANAA-TFTITNRCSFTVWPAATPVGGGVQLSPGQTW-------TINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCT-LSGQKPLTLAEFTI-GGSQDF--YDLSVIDGYNVAMSFSCSSG 139
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: RST4_AVESA (Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.531e-16 Identity = 53/134 (39.55%), Postives = 72/134 (53.73%), Query Frame = 3 Query: 33 SATILLLLSSYAKASF---ILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPM 425 S+T+L LL + AS T+ NNC + VWPA P G L++G + + PA SGRIW RTGC++ G SC TGDC L C G PATLA+FS+ H+ Y +S++D +N+ M Sbjct: 4 SSTVLFLLLAVFAASASAATFTITNNCGYTVWPAAIPVGGGQQLDQGQTW-------TLNVPAGTNSGRIWGRTGCSFNGGSGSCQTGDCAGALSCTLSG--QPATLAEFSIGGEHD---YYDISVIDVYNLAM 125 The following BLAST results are available for this feature:
BLAST of CV884923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884923 ID=CV884923; Name=CV884923; organism=Citrus sinensis; type=EST; length=913bpback to top |