CV884909

Overview
NameCV884909
Unique NameCV884909
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.549e-16
Identity = 44/104 (42.31%), Postives = 67/104 (64.42%), Query Frame = -2
Query:   32 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK 343
            + F  I+AATN F  +  LG GGFG VY+G++   T  VA+KR +  S QG  EF+ E  +++KL+HR+LV L+G+C E  E IL+Y+++   +L   L+  +K
Sbjct:  338 YDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTD-VAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEK 440          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.023e-16
Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = -2
Query:   44 NLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 358
            N  R FS  EIK+AT NF E  ++G G FG VYRG++ DG   +VA+K     ++ G   F  E+ +LS++RH++LVS  G+C E    ILVY+Y++ G+L +HLY
Sbjct:  591 NASRIFSHKEIKSATRNFKE--VIGRGSFGAVYRGKLPDGK--QVAVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLY 692          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.023e-16
Identity = 46/105 (43.81%), Postives = 67/105 (63.81%), Query Frame = -2
Query:   23 FAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPL 337
            F  +KAAT+NF     LG GGFG VY+G   G   ++A+KR +  S QG  EF+ EI +L+KL+HR+LV L+G+C E  E ILVY+++   +L   ++  +K  L
Sbjct:  351 FETLKAATDNFSPENELGRGGFGSVYKGVFSGGQ-EIAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQL 454          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.451e-16
Identity = 47/132 (35.61%), Postives = 77/132 (58.33%), Query Frame = -2
Query:   47 AKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLS-------------EQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL 403
            +K   +G+Y+  L  +  R F+++E+ + TNNF++  ++G GGFG VY G ++  T ++A+K  N  S              Q   EFQ E E+L  + HR+L S +GYC++   M L+Y+YMA G L+++L
Sbjct:  537 SKIMYSGAYSGPLLPSGKRRFTYSEVSSITNNFNK--VIGKGGFGIVYLGSLEDGT-EIAVKMINDSSFGKSKGSSSSSSSSQVSKEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYL 665          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.451e-16
Identity = 41/101 (40.59%), Postives = 67/101 (66.34%), Query Frame = -2
Query:   47 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL 349
            R F+++E+   TNNF    ++G GGFG V  G I+G+  +VA+K  +  S QG   F+ E+++L ++ H +LVSL+GYC+E   + L+Y+++  G LR+HL
Sbjct:  567 RRFTYSEVIKMTNNFQR--VVGEGGFGVVCHGTINGSE-QVAVKVLSQSSSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHL 664          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.451e-16
Identity = 50/134 (37.31%), Postives = 80/134 (59.70%), Query Frame = -2
Query:   44 LPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 445
            L L ++    S  + K +T     S  P +L   F F  I+ AT+NF     LG GGFG+VY+G +   T ++A+KR +  S QG  EF+ E+ +++KL+H++LV L+G+C E  E ILVY++++  +L   L+
Sbjct:  297 LGLVIWKRRQSYKTLKYHTDDDMTS--PQSL--QFDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNET-EIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLF 425          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16
Identity = 47/108 (43.52%), Postives = 74/108 (68.52%), Query Frame = -2
Query:   26 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIG-YCEENCEMILVYDYMAYGTLREHLYKTQKPP 343
            FS+ E++ ATNNFD +  LG GGFG VY G++ DG +  VA+KR    + +   +F+ E+E+L+ LRH +LV+L G   +++ +++LVY+Y+A GTL +HL+  Q  P
Sbjct:  332 FSYEELEEATNNFDPSKELGDGGFGTVYYGKLKDGRS--VAVKRLYDNNFKRAEQFRNEVEILTGLRHPNLVALFGCSSKQSRDLLLVYEYVANGTLADHLHGPQANP 437          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16
Identity = 52/129 (40.31%), Postives = 78/129 (60.47%), Query Frame = -2
Query:   23 KTNTTGSYASSLPSN---LCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPL 400
            K+  +GS A    SN   L  HF    +K AT+NF     LG GGFG VY+G       ++A+KR +  S QG +EF+ EI +L+KL+HR+LV LIG+C +  E +LVY+++   +L + ++ T+K  L
Sbjct:  325 KSPLSGSIAEDEFSNTESLLVHFE--TLKTATDNFSSENELGRGGFGSVYKGVFPQGQ-EIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQL 450          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16
Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = -2
Query:   44 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 343
            F F  I+AATN F     LG GGFG+VY+G +     +VA+KR +  S QG  EF+ E+ +++KL+HR+LV L+GYC E  E ILVY+++   +L   L+
Sbjct:  314 FDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGL-QVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLF 412          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.688e-16
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = -2
Query:   44 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 343
            F+  +IKAAT+NFD    +G GGFG VY+GE+      +A+K+ +  S QG  EF  EI M+S L+H +LV L G C E  ++ILVY+Y+    L   L+
Sbjct:  666 FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKL-IAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALF 764          
The following BLAST results are available for this feature:
BLAST of CV884909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
CRK11_ARATH1.549e-1642.31Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
Y5487_ARATH2.023e-1645.28Probable LRR receptor-like serine/threonine-protei... [more]
CRK28_ARATH2.023e-1643.81Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
Y4291_ARATH3.451e-1635.61Probable LRR receptor-like serine/threonine-protei... [more]
PAM74_ARATH3.451e-1640.59Probable LRR receptor-like serine/threonine-protei... [more]
CRK31_ARATH3.451e-1637.31Putative cysteine-rich receptor-like protein kinas... [more]
Y1839_ARATH5.887e-1643.52Probable serine/threonine-protein kinase At1g18390... [more]
CRK29_ARATH5.887e-1640.31Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK19_ARATH5.887e-1645.00Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
Y1765_ARATH7.688e-1644.00Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884909 ID=CV884909; Name=CV884909; organism=Citrus sinensis; type=EST; length=572bp
TATCTAAGCCTTTGCTTCATGGCAGAGGGGGCTTTTGAGTTTTGTAAAGA
TGCTCCCTCAGTGTTCCATAAGCCATGTAATCATATACAAGTATCATTTC
ACAGTTCTCTTCACAGTAACCAATCAATGAAACAAGGTGTCGGTGTCGAA
GTTTTGAGAGCATTTCAATCTCAGTCTGGAACTCATGCACACCTTGCTCA
GAGAGTGGGTTCCCACGCTTGATAGCAACTTTAGTTGTTGCACCATCGAT
TTCTCCACGGTACACTTTGCCAAAGCCTCCAACCCCAAGAAGTAGAGCTT
CATCAAAGTTGTTAGTGGCAGCTTTTATCTCAGCAAATGAGAAGTGGCGG
CAAAGATTTGAAGGAAGGGAAGATGCATAACTTCCTGTAGTGTTTGTCTT
GGCTGATCCAGCAGAGTGTGAATTTCCATAGAGTGAAAGAGGAAGCCAAC
CAGATTGCGCATCACTTGAGCTCGGATCCTTCCCTTGTCTGCGGCAACGA
GATGCAGCAAAAACACAAAAGCCAACGACAAGGGCTAGAGCAATTCCTCC
ACCAACACCCCCACCAATTATT
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