CV884909

Overview
NameCV884909
Unique NameCV884909
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15
Identity = 47/111 (42.34%), Postives = 65/111 (58.56%), Query Frame = -2
Query:   23 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKT--QKPPL 349
            + FSF EI+ AT+NF    +LG GGFG VY+G +   T  VA+KR       G  +FQTE+EM+    HR+L+ L G+C    E +LVY YM  G++ + L     +KP L
Sbjct:  286 KRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTV-VAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSL 395          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15
Identity = 43/104 (41.35%), Postives = 67/104 (64.42%), Query Frame = -2
Query:   41 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGE-IDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYK 349
            R FS  E++ AT+NF E+ +LG GG G VY+G  +DG T  VA+K+   + E  + EF  E+ +LS++ HRH+V L+G C E     LVY+++  G L +H+++
Sbjct:  437 RIFSSRELEKATDNFSESRILGQGGQGTVYKGMLVDGRT--VAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHE 538          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = -2
Query:   44 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 343
            F+   I+ AT  +    L+G GGFG VYRG +D    +VA+K  +  S QG  EF  E+ +LS ++H +LV L+GYC E  + ILVY +M+ G+L + LY
Sbjct:  585 FTLEYIELATEKYKT--LIGEGGFGSVYRGTLDDGQ-EVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLY 681          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = -2
Query:   44 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 343
            F+   I+ AT  +    L+G GGFG VYRG +D    +VA+K  +  S QG  EF  E+ +LS ++H +LV L+GYC E  + ILVY +M+ G+L + LY
Sbjct:  586 FTLEYIEQATEQYKT--LIGEGGFGSVYRGTLDDGQ-EVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLY 682          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.237e-15
Identity = 43/99 (43.43%), Postives = 65/99 (65.66%), Query Frame = -2
Query:   47 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL 343
            F+FA++   TNNF +  +LG GGFG VY G  D    +VA+K  +  S QG  EF++E+E+L ++ H +L +LIGY  E  +M L+Y++MA G + +HL
Sbjct:  560 FTFADVIKMTNNFGQ--VLGKGGFGTVYHGFYDNL--QVAVKLLSETSAQGFKEFRSEVEVLVRVHHVNLTALIGYFHEGDQMGLIYEFMANGNMADHL 654          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.921e-15
Identity = 42/102 (41.18%), Postives = 68/102 (66.67%), Query Frame = -2
Query:   41 FSFAEIKAATNNFDEALLLGVGGFGKVYRGE-IDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYK 343
            FS  E++ AT+NF++  ++G GG G VY+G  +DG +  VA+K+ N + E  + EF  E+ +LS++ HRH+V L+G C E    ILVY+++  G L +HL++
Sbjct:  442 FSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRS--VAVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHE 541          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.921e-15
Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = -2
Query:   20 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQ----GVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLP 349
            + FS  E++ AT++F    +LG GGFGKVY+G + DG  T VA+KR   L E+    G  +FQTE+EM+S   HR+L+ L G+C    E +LVY YMA G++   L +     LP
Sbjct:  291 KRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADG--TLVAVKR---LKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLP 400          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.921e-15
Identity = 43/105 (40.95%), Postives = 65/105 (61.90%), Query Frame = -2
Query:   41 CRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYK 352
            C+  S  E+  +TNNF +A ++G GGFG VY+    DG+  K A+KR +    Q   EFQ E+E LS+  H++LVSL GYC+   + +L+Y +M  G+L   L++
Sbjct:  739 CKDLSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGS--KAAVKRLSGDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHE 841          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.921e-15
Identity = 47/139 (33.81%), Postives = 74/139 (53.24%), Query Frame = -2
Query:   23 LSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPL 439
            + +YG    + + K N   +  S         F    + AAT+ F     LG GGFG VY+G +     +VA+KR    S QG  EF+ E+ +L++L+HR+LV L+G+C E  E ILVY+++   +L   ++  +K  L
Sbjct:  310 IKVYGRRKESYN-KINVGSAEYSDSDGQFMLRFDLGMVLAATDEFSSENTLGQGGFGTVYKGTLLNGQ-EVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSL 446          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.816e-15
Identity = 52/144 (36.11%), Postives = 77/144 (53.47%), Query Frame = -2
Query:   23 YGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYC----EENCEMILVYDYMAYGTLREHLY---KTQKPPL 430
            +G +   G       GS     P+     F   E++ ATNNF +   +G GGFG VY+G + DG+   +A+K+      QG  EF+ E+E++S L+HR+LV L G      +   +  LVYDYM+ G L +HL+   +T K PL
Sbjct:  254 FGKAVKGGEVGWEDQGSRPKWRPNTGSIWFKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSV--IAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPL 395          
The following BLAST results are available for this feature:
BLAST of CV884909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
Y5457_ARATH1.713e-1542.34Probable LRR receptor-like serine/threonine-protei... [more]
WAKLK_ARATH1.713e-1541.35Putative wall-associated receptor kinase-like 11 O... [more]
NORK_PEA1.713e-1543.00Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
NORK_MEDTR1.713e-1543.00Nodulation receptor kinase OS=Medicago truncatula ... [more]
Y1570_ARATH2.237e-1543.43Probable LRR receptor-like serine/threonine-protei... [more]
WAKLL_ARATH2.921e-1541.18Putative wall-associated receptor kinase-like 13 O... [more]
SERK2_ARATH2.921e-1543.48Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
PSKR2_ARATH2.921e-1540.95Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
CRK39_ARATH2.921e-1533.81Putative cysteine-rich receptor-like protein kinas... [more]
Y1105_ARATH3.816e-1536.11Probable receptor-like protein kinase At1g11050 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884909 ID=CV884909; Name=CV884909; organism=Citrus sinensis; type=EST; length=572bp
TATCTAAGCCTTTGCTTCATGGCAGAGGGGGCTTTTGAGTTTTGTAAAGA
TGCTCCCTCAGTGTTCCATAAGCCATGTAATCATATACAAGTATCATTTC
ACAGTTCTCTTCACAGTAACCAATCAATGAAACAAGGTGTCGGTGTCGAA
GTTTTGAGAGCATTTCAATCTCAGTCTGGAACTCATGCACACCTTGCTCA
GAGAGTGGGTTCCCACGCTTGATAGCAACTTTAGTTGTTGCACCATCGAT
TTCTCCACGGTACACTTTGCCAAAGCCTCCAACCCCAAGAAGTAGAGCTT
CATCAAAGTTGTTAGTGGCAGCTTTTATCTCAGCAAATGAGAAGTGGCGG
CAAAGATTTGAAGGAAGGGAAGATGCATAACTTCCTGTAGTGTTTGTCTT
GGCTGATCCAGCAGAGTGTGAATTTCCATAGAGTGAAAGAGGAAGCCAAC
CAGATTGCGCATCACTTGAGCTCGGATCCTTCCCTTGTCTGCGGCAACGA
GATGCAGCAAAAACACAAAAGCCAACGACAAGGGCTAGAGCAATTCCTCC
ACCAACACCCCCACCAATTATT
back to top