CX043266

Overview
NameCX043266
Unique NameCX043266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13203 contig Csv1_Contig13203:65..956. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3AA_MESAU (Lithocholate 6-beta-hydroxylase OS=Mesocricetus auratus GN=CYP3A10 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.999e-24
Identity = 64/212 (30.19%), Postives = 107/212 (50.47%), Query Frame = -1
Query:  260 MKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 892
            + + +    D   ++M T        G       S  ++  +  +F FAG E+TS  +   +  L+ H D Q++   E+     N  P  YD L  ++ + M++ E LRLYP    L R   K  ++  L +P G+ + +P   +H+DPE W  +  EF+PERF++  +K + +   Y PF  GPR C+G  FAL+  K+A   +LQN++ +
Sbjct:  261 LHSNQKTRMDFFQLMMNTQ----NSKGKESQKALSDLEMAAQAIIFIFAGYESTSTSICLVLYELATHPDVQKKLHDEIDSALPNKAPVTYDVLMGMEYLDMVINEGLRLYPIANRLERISKKAVEINGLFIPKGITVMVPTYPLHRDPEYW-PEPEEFRPERFSKE-NKGSIDPYVYMPFGNGPRNCIGMRFALLSMKLAVVSVLQNFTLQ 466          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C340_ORYLA (Cytochrome P450 3A40 OS=Oryzias latipes GN=cyp3a40 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.410e-24
Identity = 65/195 (33.33%), Postives = 105/195 (53.85%), Query Frame = -1
Query:  257 IEEHGNNKN----VGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFEL 826
            I+   NN+N     G S ++++ +  +F FAG ETTS  L +    L+ + +  ++ ++E+   F N  P  Y  L  ++ +  ++ E LRLYP    L R      ++  L +P  + + +P   +H+DPELW +   +FKPERF++  +K   +  +Y PF  GPR C+G  FALV  K+A   ILQ Y F +
Sbjct:  276 IDSQKNNQNGLQDKGLSDHEILSQAMIFIFAGYETTSSSLTFLAYNLATNPEVMKKLQKEIDATFPNKAPVQYVPLMEMEYLDCVVNESLRLYPIAARLERVAKATVEVNGLVIPKDMVVMVPTWPLHRDPELWPEPE-KFKPERFSKE-NKDTFDPYTYMPFGAGPRNCIGMRFALVMMKLAVVEILQTYDFSV 468          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP134_DROME (Probable cytochrome P450 313a4 OS=Drosophila melanogaster GN=Cyp313a4 PE=2 SV=4)

HSP 1 Score: 111.694 bits (278), Expect = 5.817e-24
Identity = 60/184 (32.61%), Postives = 104/184 (56.52%), Query Frame = -1
Query:  254 FSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELS 793
            F++ +V +E  +  F   ETT+  + +T++LL+   ++QERA +E+  +F N       Y     +  + +IL E +R+ PPV ++SR   ++ KL N + +P GVQI + +  +H+  ++WG DA  F P+ F    +   K+  +Y PF  G R C+G  +AL+ AK+    +L+NY F+ S
Sbjct:  284 FTLKNVEDESNIIVFGAFETTANAVYYTLMLLAMFPEYQERAFEEIKTIFPNTGDFDVSYADTQQMVYLDLILNESMRVIPPVPVVSRQTSQDLKLSNGIVVPKGVQIAIDIYHMHRSKKIWGPDAETFNPDHFLPH-NIQDKHPYAYIPFTKGIRNCIGWRYALISAKVTLAKLLRNYRFKTS 466          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CPXB_BACME (Bifunctional P-450/NADPH-P450 reductase OS=Bacillus megaterium GN=CYP102A1 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 7.597e-24
Identity = 75/229 (32.75%), Postives = 118/229 (51.53%), Query Frame = -1
Query:  206 KAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPE 889
            KA    ++DLL  ++     E  E  +++N+ + +         F  AG ETTS LL++ +  L K+    ++A +E  +V  +  P Y  +  LK V M+L E LRL+P     S    ++T L G   L  G ++ + +  +H+D  +WGDD  EF+PERF    + +A  Q ++ PF  G R C+GQ FAL EA +   M+L+++ FE   +Y        TL PE
Sbjct:  225 KASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIIT-------FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE---NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP4F3_RAT (Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus norvegicus GN=Cyp4f3 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.922e-24
Identity = 64/189 (33.86%), Postives = 102/189 (53.97%), Query Frame = -1
Query:  269 EEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNY 823
            +EHG       S  D+  E   F F G +TT+  L+W +  L+KH ++QER RQEV ++  + +P   ++D L  L  + M + E LRL+PP T +SR   ++  L     +P GV   + +   H +P +W D  V + P RF     K  ++ +++ PF+ GPR C+GQ FA+ E K+A  + L  +
Sbjct:  307 DEHGE----ALSDEDIRAEADTFMFGGHDTTASGLSWILYNLAKHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPATAISRCCTQDIMLPDGRVIPKGVICRISIFGTHHNPAVWPDPEV-YNPFRFDADNGK-GRSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRF 489          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3AI_RAT (Cytochrome P450 3A18 OS=Rattus norvegicus GN=Cyp3a18 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.922e-24
Identity = 61/203 (30.05%), Postives = 107/203 (52.71%), Query Frame = -1
Query:  260 DLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 865
            D L ++M T        G       S  ++  +  +F F G + TS  +++ M  L+   + Q++ + E+ +   N  P  YD L  ++ + M++ E LRLYP  T L R   K+ ++  + +P G  + +P+  +H++PE W +   EF PERF++  +K + +   Y PF  GPR C+G  FAL+  K+A   +LQN++ +
Sbjct:  270 DFLQLMMNTQ----NSKGQESQKALSDLEMAAQAIIFIFGGYDATSTSISFIMYELATRPNVQKKLQNEIDRALPNKAPVTYDALMEMEYLDMVVNESLRLYPIATRLDRVSKKDVEINGVFIPKGTVVTIPIYPLHRNPEYWLEPE-EFNPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALISMKLAVIGVLQNFNIQ 466          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C4D20_DROME (Probable cytochrome P450 4d20 OS=Drosophila melanogaster GN=Cyp4d20 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.922e-24
Identity = 71/217 (32.72%), Postives = 113/217 (52.07%), Query Frame = -1
Query:  251 GEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDG------LNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSP 883
            G  +   LL IL+++S           N   S  D+ EE   F F G +TTS  ++  +  +++H + Q+R  +E+ +V G   PD         L  LK +  ++ E +RLYPPV  + R   KE ++G+ T+PA   I L +   H+D   +  D + F+PERF E   +   N  +Y PF+ GP+ C+GQ FA++E K+  + +L+ Y  EL P
Sbjct:  280 GSKSQMALLDILLQSSIN---------NQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLG---PDASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYF-PDPLSFRPERFLED-QEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFY--ELLP 480          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP4F2_HUMAN (Leukotriene-B(4) omega-hydroxylase 1 OS=Homo sapiens GN=CYP4F2 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.296e-23
Identity = 67/204 (32.84%), Postives = 106/204 (51.96%), Query Frame = -1
Query:  203 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGD----DAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPEL 790
            S  D+  E   F F G +TT+  L+W +  L+KH ++QER RQEV ++  + +P   ++D L HL  + M + E LRL+PPV ++SR V ++  L     +P G+   + +   H +P +W D    D   F PE   E      ++ +++ PF+ GPR C+GQ FA+ E K+   + L    F + P +       P   PEL
Sbjct:  314 SDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEYQERCRQEVQELLKDREPKEIEWDDLAHLPFLTMCMKESLRLHPPVPVISRHVTQDIVLPDGRVIPKGIICLISVFGTHHNPAVWPDPEVYDPFRFDPENIKE------RSPLAFIPFSAGPRNCIGQTFAMAEMKVVLALTL--LRFRVLPDHTE-----PRRKPEL 504          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3AP_MOUSE (Cytochrome P450 3A25 OS=Mus musculus GN=Cyp3a25 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.296e-23
Identity = 66/217 (30.41%), Postives = 110/217 (50.69%), Query Frame = -1
Query:  260 MKAGEAANN-----DLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 892
            MK    A+N     D L ++M T        G       S  ++  +  +F F G + TS  ++  M  L+ H D Q++ + E+ +   N  P  YD L  ++ + M++ E LRLYP    L R   K+ ++  + +P G  + +P+  +H++PE W  +  EF PERF++  +K   +   Y PF  GPR C+G  FAL+  K+A   +LQN++ +
Sbjct:  256 MKKERLASNQKNRVDFLQLMMNTQ----NSKGQESQKALSDLEMAAQAVIFIFGGYDATSTSISLIMYELATHPDVQKKLQDEIDRTLPNKAPVTYDALMDMEYLDMVVNESLRLYPIAIRLERVSKKDVEINGVFIPKGTVVMIPIYPLHRNPEYW-PEPQEFCPERFSKE-NKGNIDPYIYMPFGNGPRNCIGMRFALISIKLAVIGVLQNFTVQ 466          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP131_DROME (Probable cytochrome P450 313a1 OS=Drosophila melanogaster GN=Cyp313a1 PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.296e-23
Identity = 62/184 (33.70%), Postives = 101/184 (54.89%), Query Frame = -1
Query:  245 DVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVF---GNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF-AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSY 781
            DV  EC +   AG +T+++ +   + LL+ H + QE   +E+  VF   G+    Y  +  L  ++ ++ E LRL P + + +R    + +L N + +P GV IG+ M   H++PE+WG DA  F P+ F AE + +  K+  +Y PFA G R C+G  +A++ +K A   IL+NY    S  Y
Sbjct:  286 DVKSECCIMIAAGYDTSALTVYHALFLLANHPEHQEAVFEELNGVFPDAGHFGITYPDMQKLDYLERVIKETLRLIPAIPITARETKNDVRLSNGVLIPKGVVIGIDMFHTHRNPEVWGPDADNFNPDNFLAENMEQ--KHPYAYIPFARGKRNCIGSKYAMMSSKFALCRILRNYKISTSTLY 467          
The following BLAST results are available for this feature:
BLAST of CX043266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP3AA_MESAU1.999e-2430.19Lithocholate 6-beta-hydroxylase OS=Mesocricetus au... [more]
C340_ORYLA3.410e-2433.33Cytochrome P450 3A40 OS=Oryzias latipes GN=cyp3a40... [more]
CP134_DROME5.817e-2432.61Probable cytochrome P450 313a4 OS=Drosophila melan... [more]
CPXB_BACME7.597e-2432.75Bifunctional P-450/NADPH-P450 reductase OS=Bacillu... [more]
CP4F3_RAT9.922e-2433.86Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus nor... [more]
CP3AI_RAT9.922e-2430.05Cytochrome P450 3A18 OS=Rattus norvegicus GN=Cyp3a... [more]
C4D20_DROME9.922e-2432.72Probable cytochrome P450 4d20 OS=Drosophila melano... [more]
CP4F2_HUMAN1.296e-2332.84Leukotriene-B(4) omega-hydroxylase 1 OS=Homo sapie... [more]
CP3AP_MOUSE1.296e-2330.41Cytochrome P450 3A25 OS=Mus musculus GN=Cyp3a25 PE... [more]
CP131_DROME1.296e-2333.70Probable cytochrome P450 313a1 OS=Drosophila melan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A01-B2-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043266 ID=CX043266; Name=CX043266; organism=Citrus sinensis; type=EST; length=892bp
TTTTTTTTAGCACCAAATATTGTACAATATTATTATAATACAGTACTAAT
GCAATACAGTATAATACAATACAATGTGCCAAACGCACCCTAAATACATT
AAACTTCATTATAAAAAAGTCTACATTGGCATCATGCTCATCTTATAGTT
GCCGGTATTAATTATTTTTGCACCATAGTTTCCGTAGAATCAATTGGGTA
CCCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGA
TGGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGTCGTGGCCATTT
TTGCTTCTACTAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCAAT
GCGAATGGGAAATATGAAACTTGATTTTTCGCCGCCTTTGAAATTCCTTC
CGCAAACCTTTCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAG
GATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGT
AATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCAT
AGTTACGGGCGGATAAAGCCTGAGTACCTCATAAAGTATCATCTGGACAA
TTTTGAGGTGATTCAATCCATCATAGTCGGGCTTATTATTGCCAAACACT
TGCAAAACCTCTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAA
TAAGACCATCGTCCAATTAAGCAAAACAGAGGTAGTCTCTTGGCCGGCAA
AGTAAAATAGCTTACACTCTTCGATCACATCGTTCATGCTGAACCCAACA
TTTTTGTTATTTCCATGTTCTTCAATCTCTCTAAAACTGGTTTCCATCAG
TATGCCTAACAAGTCATTATTCGCAGCTTCCCCTGCTTTCAT
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