CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PROM1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain NATL1A) GN=gatA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.346e-29 Identity = 88/242 (36.36%), Postives = 130/242 (53.72%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPAT 849 T +DL+ K +++S++LV+ + I+ L+P L+ + VN + ALS+A+ D +++ + L L GIPI +KDN+ TK + TT S L V P ++ V KL AGAI++GK ++ E++ SS S F G NP+ ++ P L SLG++T GSI P+S VVG+KPT G SR G+I D VGP V+DAA +L I+G D D T Sbjct: 2 TFEDLRQKLKSGEVSSKELVQEKINRINELDPTLNSFLIVNTELALSKAEHID--KQIASGDHLPPLSGIPIAIKDNLCTKG-IKTTCASKILDNFVPPYESTVTKKLLNAGAIMIGKTNMDEFA-MGSSTETSAF----GPTLNPWNITKVPGGSSGGSAASVAAGLCYGSLGSDTGGSIRQPASFCGVVGMKPTYGRVSRWGLIAFASSLDQVGPFANNVSDAAEILQVISGKDELDSTT 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_GEOBB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=gatA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.346e-29 Identity = 94/243 (38.68%), Postives = 127/243 (52.26%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 I + TI +L K +++S + L I ++ ++ I V P+ AL QA+ AD R++ AAG + L GIP+ LKD TK + TT GS L V P D V KL++ GA+I+GK + E++ SS S F G KNP+ LS P A +LGT+T GSI P+S VGLKPT G SR GVI D VGP+ R V D+A +L A+AG+D D Sbjct: 3 IFDLTIHELHEKLKAKEVSSVEATRAMLDRIEAVDSQVNAYITVTPEQALVQAEDAD--RRI-AAGEIAPLTGIPVGLKDIFVTKG-IRTTCGSRILENFVPPYDGTAVAKLKEQGAVIVGKLNQDEFA-MGSSNESSYF----GPCKNPWDLSCTPGGSSGGSAAAIAARTATATLGTDTGGSIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPLTRDVTDSALLLGAVAGYDPMD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ACIBT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=gatA PE=3 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 3.346e-29 Identity = 87/243 (35.80%), Postives = 124/243 (51.03%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + +I++L Q K +SR+L E YL I +++P + + V + AL +AD AD K AG+ L GIP+ KD TK + TTAGS L + P DA VV K + AG + LGK ++ E++ +S+ S G NP+ L P +LA + GT+T GSI P+S + GLKPT G SR G+I D GP+ R+ D AY+++ IAG D D Sbjct: 4 LHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTSEQALREADAADAALK---AGNATALTGIPLAHKDIFCTKG-IKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLGKVNMDEFAMGSTSE-----SSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDAKD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_GEOSL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter sulfurreducens GN=gatA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.369e-29 Identity = 90/241 (37.34%), Postives = 124/241 (51.45%), Query Frame = 1 Query: 121 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 E T+ +L + +++S + L I + ++ I V PD AL+ A+ AD R++ AAG L L G+P+ LKD T+ + TT GS L + P D VV KLR+AGA+I+GK + E++ SG S G KNP+ L+ P A +LGT+T GSI P+S VGL+PT G SR GVI D VGP+ R V D A +L A+AG D D Sbjct: 5 ELTLHELHDKLAKREVSSVEATRALLARIEATDSRVNAYITVTPDEALAAAEAAD--RRI-AAGGLTPLTGVPVALKDIFVTRG-IRTTCGSKILGNFIPPYDGTVVAKLREAGAVIVGKLNQDEFA-----MGSSGESSAFGATKNPWNLACIPGGSSSGSAAAIAARSATATLGTDTGGSIRQPASHCGCVGLRPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCALMLGAVAGHDPLD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CHRSD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gatA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.369e-29 Identity = 90/248 (36.29%), Postives = 129/248 (52.02%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRA 855 + + T+ +L + + +SR+L + L I RL+ L+ I V + AL+ AD AD R A+G L G+P+ LKD T+ + T+ GS L V P DA VV K+R+AG + LGK ++ E++ SS S + G KNP+ LSA P L +LGT+T GSI P++ + GLKPT G SR G++ D GP+ RT AD A +L+ IAG D D + A Sbjct: 1 MHDKTLTELAAGLRAGEFSSRELCQSALDRIQRLDGDLNSFISVTAEQALADADAADQAR---ASGDAAALAGLPLALKDIFCTQG-VRTSCGSKMLDSFVAPYDATVVEKIRQAGGVSLGKTNMDEFA-MGSSNENSFY----GPVKNPWDLSAVPGGSSGGSAAAVAAGLVPAALGTDTGGSIRQPAAFCGITGLKPTYGRVSRYGMVAYASSLDQGGPMARTAADCALLLETIAGHDVRDSTSVA 239
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_DEHSB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides sp. (strain BAV1) GN=gatA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.734e-29 Identity = 87/239 (36.40%), Postives = 126/239 (52.72%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI K +K++S +L + +L I +L P + + V P+ ALSQA+ AD K G +R L GIP+ LKD + TK + TT S L V P +A VV KL K GA++LGK ++ E++ S++ + F+ R NP+ P + A SLG++T GSI P+S SV G KP+ G+ SR G++ D +GP + D A V++AIAGFD D Sbjct: 8 TIAQSHKLLKDHKISSAELTKAHLERIEKLEPEIKAFMTVCPETALSQAEAAD---KAIKQGDIRPLTGIPMALKDVLCTKG-IRTTCSSKMLENFVPPYNAHVVDKLAKEGAVLLGKTNMDEFAMGSSTENSAYFTTR-----NPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFCSVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDAMDCALVMNAIAGFDDRD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ALHEH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=gatA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.734e-29 Identity = 89/243 (36.63%), Postives = 126/243 (51.85%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + E T+ ++ A + + +SR++ E +L I LNP+ + VI P+ AL+ AD AD AAG L G+P++ KD T+ + T+ GS L P DA VV KL AG ++LGKA++ E++ SS S + G KNP+ L A P LA + GT+T GSI P++ + GLKPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 1 MHEKTVAEIAAALRAGEFSSREVTEAFLARIDALNPVTNAVITPTPEQALAAADAADQRI---AAGEAGPLTGVPLVHKDIFCTQG-VRTSCGSRMLDNFTAPYDATVVGKLADAGMVMLGKANMDEFA-MGSSNETSYY----GPVKNPWDLDAVPGGSSGGSAAAVAGRLAPAATGTDTGGSIRQPAALCGLSGLKPTYGRVSRYGMIAFASSLDQGGPMARTCEDLALLLGGMAGFDTRD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_DEHSC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides sp. (strain CBDB1) GN=gatA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.271e-28 Identity = 87/239 (36.40%), Postives = 125/239 (52.30%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI K K++S +L + +L I +L P + + V P+ ALSQA+ AD K G +R L GIP+ LKD + TK + TT S L V P +A VV KL K GA++LGK ++ E++ S++ + F+ R NP+ P + A SLG++T GSI P+S SV G KP+ G+ SR G++ D +GP + D A V++AIAGFD D Sbjct: 8 TIAQSHKLLKDRKISSAELTKAHLERIEKLEPEIKAFMTVCPETALSQAEAAD---KAIKQGDIRPLTGIPMALKDVLCTKG-IRTTCSSKMLENFVPPYNAHVVDKLAKEGAVLLGKTNMDEFAMGSSTENSAYFTTR-----NPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFCSVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDAMDCALVMNAIAGFDDRD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_COXBU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii GN=gatA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.271e-28 Identity = 88/243 (36.21%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + TI +L+ + ++S +L + +L I +NP L+ I + + AL+QA AD A G L GIPI KD TKD + T+ GS L + P DA VV +L KAGAI++GK ++ E++ SS S F G KNP+ L P L + GT+T GSI P++ + GLKPT G SR G+I D GP+ +T DAA +L+A+AG D D Sbjct: 1 MHQKTIAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARL---AKGEATSLTGIPIAQKDIFCTKD-IKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFA-MGSSNENSYF----GAVKNPWDLERVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQAGPMAQTAEDAALLLNALAGHDAKD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_COXBR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=gatA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.271e-28 Identity = 88/243 (36.21%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + TI +L+ + ++S +L + +L I +NP L+ I + + AL+QA AD A G L GIPI KD TKD + T+ GS L + P DA VV +L KAGAI++GK ++ E++ SS S F G KNP+ L P L + GT+T GSI P++ + GLKPT G SR G+I D GP+ +T DAA +L+A+AG D D Sbjct: 1 MHQKTIAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARL---AKGEATSLTGIPIAQKDIFCTKD-IKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFA-MGSSNENSYF----GAVKNPWDLERVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQAGPMAQTAEDAALLLNALAGHDAKD 234 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |