CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSEE4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas entomophila (strain L48) GN=gatA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.114e-24 Identity = 82/243 (33.74%), Postives = 116/243 (47.74%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ +S +L L I +L+P L+ I V + AL QA AD R AAG L G PI KD T+ + T+ GS L P DA VV KL +AG + LGK ++ E++ +++ S G KNP+ L P L + GT+T GSI P++ ++ GLKPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 1 MHQLTLAEIARGLADKSFSSEELTGALLSRIKQLDPQLNSFITVTEEQALHQARAADARR---AAGETGALLGAPIAHKDLFCTQG-VRTSCGSKMLDNFTAPYDATVVAKLAEAGMVTLGKTNMDEFAMGSANE-----SSHYGAVKNPWNLEHVPGGSSGGSAAAVAARLLPATTGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDSKD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_NATTJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=gatA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.114e-24 Identity = 80/244 (32.79%), Postives = 123/244 (50.41%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRG-LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + E T+ +++ +Q +S +LV I + I + + AL+Q+ + D +R A G G L GIP+ +KDNI TKD + T+ S L V P +A V+ KL +AGAII+GK ++ E++ S++ + F NP+ P ++LG++T GSI P+S VVG+KPT G SR G++ D +GP+ + V D A LD I+G DH D Sbjct: 3 LHELTLMEVKRGLEQGDFSSEELVTSVYDRIEETEDHIKAYITLTKEQALAQSKEIDSQR---AKGEELGPLAGIPVAIKDNICTKD-VTTSCASKILEDFVPPYNATVISKLAEAGAIIVGKTNMDEFAMGSSTENSAFFVT-----SNPWDTERVPGGSSGGSAASVASAQVPLALGSDTGGSIRQPASFCGVVGMKPTYGRVSRYGLVAFASSLDQIGPLSKNVEDTALALDIISGHDHMD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSEPW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas putida (strain W619) GN=gatA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.455e-24 Identity = 82/243 (33.74%), Postives = 115/243 (47.33%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ +S +L L I +L+P L+ I V + AL QA AD R AAG L G PI KD T + T+ GS L P DA VV KL +AG + LGK ++ E++ +++ S G KNP+ L P L + GT+T GSI P++ ++ GLKPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 1 MHQLTLAEIARGLADKSFSSEELTGALLARIQQLDPQLNSFISVTEELALGQARAADARR---AAGETGALLGAPIAHKDLFCTNG-VRTSCGSKMLDNFKAPYDATVVAKLAEAGMVTLGKTNMDEFAMGSANE-----SSHYGAVKNPWNLEHVPGGSSGGSAAAVAARLLPATTGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CYAP8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain PCC 8801) GN=gatA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.455e-24 Identity = 81/239 (33.89%), Postives = 123/239 (51.46%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A+I++L + ++ ++ L I + P + + + D + KA ++K+ A + L GIPI +KDN++TK + TT GS L + P ++ V KL++ GA+++GK +L E++ SS SG+ NP+ L P V+LG++T GSI P+S VVGLKPT GL SR G++ D +GP RTV D A VL AIAG+D D Sbjct: 2 ASIRELHQQLINKERSAVEITTEALERIAAIEPQVKSFLCITADRALETAKA-VDQKIAAKEEIGLLAGIPIGIKDNMSTKG-IPTTCGSRILENFIPPYESTVTQKLQEIGAVMVGKTNLDEFA-MGSSTENSGYQVTA----NPWDLERVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFGLVAYGSSLDQIGPFGRTVEDVAIVLGAIAGYDAKD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ACIBL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidobacteria bacterium (strain Ellin345) GN=gatA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.455e-24 Identity = 86/243 (35.39%), Postives = 122/243 (50.21%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 I TI ++A ++ + T+ + E + +I + ++ + ++ D AL+QA K D L L G+P+ +KD I+TK + TTAGS L + P DA VV KL AGA+ILGK + E++ SS S + G +NP S P A SLG++T GSI P+S VVGL PT G SR G+I D +GP + V DAA +L+ IAG D D Sbjct: 3 INVLTIDATRIAIQERQATATAIAESFYKKIEAEDGEINAYLTLSRDRALAQAAKID--AIADRGDDLPRLAGLPVAIKDVISTKG-VRTTAGSKILEEFIAPYDATVVQKLEAAGAVILGKTNCDEFA-MGSSNENSAY----GPVRNPRDKSRVPGGSSGGSAAVVAAGTAVTSLGSDTGGSIRQPASFCGVVGLMPTYGRVSRYGLIAFASSLDHIGPFAKDVKDAAIMLEVIAGRDPMD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_RALPJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ralstonia pickettii (strain 12J) GN=gatA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.900e-24 Identity = 88/242 (36.36%), Postives = 116/242 (47.93%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIH---RLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 +TIK L ++++ +L YL I LN H E L+QA AD AAG+ L G+PI KD T+ TAGS L V P DA VV +L AG + LGK ++ E++ SS S F G KNP+ L P +LA + GT+T GSI P+S + + G+KPT G SR G+I D GP+ RT D A +L A+AGFD D Sbjct: 4 STIKALSAQLAAKEVSAEELARHYLSRIEAGAHLNAFTHVDAEAT---LAQARAADARI---AAGNAAPLTGVPIAHKDVFVTRG-WRATAGSKMLGNYVSPFDATVVERLGAAGMVTLGKTNMDEFA-MGSSNENSAF----GAVKNPWNLEHVPGGSSGGSAAAVAADLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMARTAEDCALLLSAMAGFDPRD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PROM4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9211) GN=gatA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.900e-24 Identity = 83/238 (34.87%), Postives = 117/238 (49.16%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI + + +++S +LV I ++ LH +++ D+ + K E ++ L L GIP +KDN+ TK + TT S L V P ++ V +L +AGAI+LGK +L E++ SS S F G NP+ LS P L +LG++T GSI P+S VVGLKPT G SR G++ D VGP +V DAA VL IAG D D Sbjct: 2 TIAEWRQRLNNREISSLELVNEQFARIKDVDNKLHAFLKLEEDSARENAKRIDEARLSGK-ELPPLAGIPFAIKDNLCTKG-VKTTCSSKMLESFVPPYESTVTQRLWEAGAILLGKTNLDEFA-MGSSTETSAF----GATSNPWDLSRVPGGSSGGSAAAVASGLCLAALGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFTTSVEDAAEVLQVIAGKDPLD 232
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CLOCE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=gatA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.900e-24 Identity = 85/243 (34.98%), Postives = 121/243 (49.79%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 I TIK+ + ++++ +L YL I+ L+ + + V D AL QA++A + + G L GIP+ +KDNI + TT S L V P A V KL A+ILGK +L E++ S S F KNP+ L+ P +LA SLG++T GS+ P+S VVG+KPT GL SR G++ D +GPI +TV D A +LD+I G D D Sbjct: 3 ITRLTIKEARKLLDNREISALELTRTYLDRINTLDGKVESYLSVTEDMALKQAEQA---QNLIDYGKASLLTGIPLSIKDNICIEGT-KTTCASKMLEDFVSPYTATAVDKLFADNAVILGKTNLDEFA-MGGSTENSAFKIT----KNPFDLTRVPGGSSGGSAACVSASLALGSLGSDTGGSVRQPASFCGVVGMKPTYGLVSRYGLVAFASSFDQIGPIAKTVEDCAIILDSICGNDPKD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CHLSY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=gatA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.900e-24 Identity = 83/249 (33.33%), Postives = 123/249 (49.40%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVS-------LGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + T+ Q A +T+ +L E L I+ P + + + PDA A +A ER+ + SL L GIPI +KD I T D + TTAGS L G P +A V+ +L AGA+++GK + E++ S++ + Y ++ +P + AAV+ LGT+T GSI P++ + GLKPT G SR G+I D +GP+ TVAD A +L+ IAG D D Sbjct: 4 LHHLTVTAAQAALAAGDITAVELTEACLARINATEPTIRAFLHLTPDAALAAARAADERRQQGR-SLGPLDGIPIAIKDVICT-DGVPTTAGSRILAGFRPPYNATVIERLVAAGAVLVGKLNCDEFAMGSSTE------------NSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLAVLLNVIAGHDPRD 238
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CHLAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=gatA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.900e-24 Identity = 83/249 (33.33%), Postives = 123/249 (49.40%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVS-------LGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + T+ Q A +T+ +L E L I+ P + + + PDA A +A ER+ + SL L GIPI +KD I T D + TTAGS L G P +A V+ +L AGA+++GK + E++ S++ + Y ++ +P + AAV+ LGT+T GSI P++ + GLKPT G SR G+I D +GP+ TVAD A +L+ IAG D D Sbjct: 4 LHHLTVTAAQAALAAGDITAVELTEACLARINATEPTIRAFLHLTPDAALAAARAADERRQQGR-SLGPLDGIPIAIKDVICT-DGVPTTAGSRILAGFRPPYNATVIERLVAAGAVLVGKLNCDEFAMGSSTE------------NSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLAVLLNVIAGHDPRD 238 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |