CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURS3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia sp. (strain 383) GN=gatA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.900e-24 Identity = 84/239 (35.15%), Postives = 122/239 (51.05%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I L + + V+ D L+QA AD E A G+L GL PI KD T+ ++TAGS L P DA VV +L+ AG + LGK ++ E++ SS S F G KNP+ +A P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ ++ +D A +L+A+AGFD D Sbjct: 5 SLTELRAALAAKECSAVELAQLYLKRIEAARDL-NAFVHVDADLTLAQAKAADAELARGAGGALTGL---PIAHKDVFVTRG-WHSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEFA-MGSSNENSAF----GAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ANASK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaeromyxobacter sp. (strain K) GN=gatA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.900e-24 Identity = 86/226 (38.05%), Postives = 113/226 (50.00%), Query Frame = 1 Query: 166 LTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRG-LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++S +LVE L I + L + V+ D A +A R A G R L G+P+ +KD TK + TTAGS L G + P DA VV +L AGA+I+GK ++ E++ SS S + NP+ LS P SLGT+T GSI P++ VVG+KPT G SR GV+ D VGP+ R V DAA VL IAG D D Sbjct: 25 ISSSELVEASLARIQATDGKLGAFLAVSADRARAAARAADARA--ARGERRSELDGVPVAVKDIFVTKG-VPTTAGSRILEGYLPPYDATVVERLEAAGAVIVGKLNMDEFA-MGSSNENSAYK----PCHNPWDLSRTPGGSSGGSAASVAAGQVHASLGTDTGGSIREPAAFCGVVGVKPTYGRVSRYGVVAFASSLDQVGPLAREVGDAALVLRTIAGHDPRD 242
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_SYNFM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=gatA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.481e-24 Identity = 84/240 (35.00%), Postives = 126/240 (52.50%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDA-LSQADKADY-ERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T+ +L + +L+ + + +L I L+P L+ + V ++ L++A + D ER + A+ L GIP+ +KD + + + TT GS L V P D V+ +LR+AGAI LGK ++ E++ SS S + G +NP+ P +L + SLGT+T GSI P+S VVGLKPT G SR G++ D +GPI + V DAA +L AIAG D D Sbjct: 7 TMHELHDLLVRKELSVTETLTSFLTRIETLDPRLNSYLSVLAESSLAEAGRFDRGERDLHASP----LAGIPLAIKDVLCMQGTV-TTCGSRILENFVPPYDGTVIARLREAGAIFLGKTNMDEFA-MGSSTENSAY----GVTRNPWDRERVPGGSSGGSAAAVAADLCSGSLGTDTGGSIRQPASFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITKDVEDAAILLQAIAGHDRRD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_STRCO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptomyces coelicolor GN=gatA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.481e-24 Identity = 82/243 (33.74%), Postives = 124/243 (51.03%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 I + T ++ +LT+ Q+ E +L I ++ +H + V+ + AL+QA D +R+ L L G+P+ LKD I T + + TT GS L G + P DA V +L+ A +ILGK ++ E++ SS S + G NP+ L+ P A +++GT+T GSI P+S VG+KPT G SR G++ + D GP RTV DAA + + IAG D D Sbjct: 4 IIKLTAAEIAAKIASGELTAVQVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVDEKRE--RGEKLGPLAGVPLALKD-IFTTEGIPTTVGSKILEGWIPPYDATVTKRLKAADVVILGKTNMDEFA-MGSSTENSAYGPTG----NPWDLTKIPGGSGGGSSAALAAFQAPLAIGTDTGGSIRQPASVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHDPMD 238
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSEP1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=gatA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.481e-24 Identity = 81/243 (33.33%), Postives = 116/243 (47.74%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ +S +L L I +L+P ++ I + D AL+QA AD R AAG L G PI KD T + T+ GS L P DA VV KL +AG + LGK ++ E++ +++ S G KNP+ L P L + GT+T GSI P++ ++ GLKPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 1 MHQLTLAEIARGLADKSFSSEELTGALLARIKQLDPQINSFISITDDLALAQARAADARR---AAGETGVLLGAPIAHKDLFCTNG-VRTSCGSKMLDNFKAPYDATVVAKLAEAGMVTLGKTNMDEFAMGSANE-----SSHYGAVKNPWNLEHVPGGSSGGSAAAVAARLLPATTGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSEMY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas mendocina (strain ymp) GN=gatA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.481e-24 Identity = 81/243 (33.33%), Postives = 118/243 (48.56%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ + + ++ +L L I +L+P L+ I V D A+ QA AD R AAG L G PI KD T + T+ GS L G P DA VV KL+ AG + LGK ++ E++ +++ S G KNP+ S P L + GT+T GSI P++ ++ G+KPT G SR G+I D GP+ R D A +L A+AGFD D Sbjct: 1 MHQMTLAEIAKGLEAKQFSAEELSRALLARIAQLDPQLNSFITVTEDLAIEQAKAADARR---AAGENGALLGAPIAHKDLFCTNGVL-TSCGSKILTGFKAPYDATVVEKLKAAGTVTLGKLNMDEFAMGSANE-----SSHYGAVKNPWDTSRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARDAFDCALLLGAMAGFDAKD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ANADE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=gatA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.481e-24 Identity = 87/226 (38.50%), Postives = 112/226 (49.56%), Query Frame = 1 Query: 166 LTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRG-LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++S +LVE L I + L + V D A KA R A G R L G+P+ +KD TK + TTAGS L G + P DA VV +L AGA+I+GK ++ E++ SS S + NP+ LS P SLGT+T GSI P++ VVG+KPT G SR GV+ D VGP+ R V DAA VL IAG D D Sbjct: 25 ISSTELVEASLARIQATDGKLGAFLAVCADRARAAAKAADARA--ARGERRSELDGVPVAVKDLFVTKG-VPTTAGSRILEGYLPPYDATVVERLEAAGAVIVGKLNMDEFA-MGSSNENSAYK----PCHNPWDLSRTPGGSSGGSAASVAAGQVHASLGTDTGGSIREPAAFCGVVGVKPTYGRVSRYGVVAFASSLDQVGPLAREVGDAALVLRTIAGHDPRD 242
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ANAD2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=gatA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.481e-24 Identity = 86/226 (38.05%), Postives = 113/226 (50.00%), Query Frame = 1 Query: 166 LTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRG-LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++S +LVE L I + L + V+ D A +A R A G R L G+P+ +KD TK + TTAGS L G + P DA VV +L AGA+I+GK ++ E++ SS S + NP+ LS P SLGT+T GSI P++ VVG+KPT G SR GV+ D VGP+ R V DAA VL IAG D D Sbjct: 25 ISSSELVEASLARIQATDGKLGAFLAVSADRARAAARAADARA--ARGERRSELDGVPVAVKDLFVTKG-VPTTAGSRILEGWLPPYDATVVERLEAAGAVIVGKLNMDEFA-MGSSNENSAYK----PCHNPWDLSRTPGGSSGGSAASVAAGQVHASLGTDTGGSIREPAAFCGVVGVKPTYGRVSRYGVVAFASSLDQVGPLAREVGDAALVLRTIAGHDPRD 242
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_STRAW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptomyces avermitilis GN=gatA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.240e-24 Identity = 81/239 (33.89%), Postives = 122/239 (51.05%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T ++ +LT+ Q+ E +L I ++ +H + V+ + AL+QA D +R+ L L G+P+ LKD I T + + TT GS L G + P DA + KL+ A +ILGK ++ E++ SS S + G NP+ LS P A +++GT+T GSI P++ VG+KPT G SR G++ + D GP RTV DAA + + IAG D D Sbjct: 12 TAAEIAAKVASGELTAVQVTEAHLARIDAVDEKVHAFLHVDREGALAQARAVDEKRE--RGEKLGPLAGVPLALKD-IFTTEGIPTTVGSKILEGWIPPYDATLTKKLKAADVVILGKTNMDEFA-MGSSTENSAYGPTG----NPWDLSRIPGGSGGGSSAALASFEAPLAIGTDTGGSIRQPAAVTGTVGVKPTYGAVSRYGMVAFSSSLDQGGPCARTVLDAALLHEVIAGHDPLD 242
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ROSCS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=gatA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.240e-24 Identity = 83/244 (34.02%), Postives = 121/244 (49.59%), Query Frame = 1 Query: 112 PIREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNP-DALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 P+ + T+ + + +++S +L + L I + P + + V+ A +QA AD R AAG L GIP+ +KD I+T+ + TT S L DA V +L+ AGA+ILGK + E++ SS S F Q +NP+ L P A +LGT+T GSI P++ + GLKPT G SR G++ D +GP+ RTV D A VL IAG D +D Sbjct: 3 PLYQLTVAQAREMLARGEISSLELTDALLTRIAAVEPKVRAFLVVDAAGARAQARAADARR---AAGDASPLLGIPMGIKDVISTQG-LRTTCASKMLENYTPVYDATAVARLKAAGAVILGKLNCDEFA-MGSSTENSAFQ----QTRNPWNLERVPGGSSGGSAAAVAAGEAPAALGTDTGGSIRQPAALCGITGLKPTYGRVSRYGLVAFASSLDQIGPMARTVRDCAIVLRVIAGADPFD 237 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |