CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_DESPS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfotalea psychrophila GN=gatA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.240e-24 Identity = 81/251 (32.27%), Postives = 124/251 (49.40%), Query Frame = 1 Query: 121 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKA----------PSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 E +I++ + ++S +L + L I + + G I V+ + AL+QA AD K G L GIP+ +KD +A KD + T GS L + P +A +V KL+ AGA+ LGK ++ E++ +S+ G+ G G + ++A C S+GT+T GSI P++ VVG+KPT G SR G+ D GP+CRTVAD A V+++I G+D D Sbjct: 5 ELSIEEAAAKLRAGDISSVELTQSCLQRIGDVEDRVKGFITVDEEGALAQAKAAD---KALQNGETNPLCGIPMSIKDLLAVKD-LPMTCGSKMLEKFIAPYNATIVDKLQGAGAVNLGKVTMDEFAMGSTSETCAFGVPQNPWKEGYVAGGSSGGSAVTVAAQECFF---------------SIGTDTGGSIRQPAALCGVVGMKPTYGRVSRYGLTAFASSLDQAGPLCRTVADTALVMNSICGYDPMD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURMS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia mallei (strain SAVP1) GN=gatA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.240e-24 Identity = 87/241 (36.10%), Postives = 119/241 (49.38%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHR---LNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I LN +H E+ L+QA AD AG L GL PI+ KD T+ +TAGS L P DA VV +L AG + LGK ++ E++ SS S F G KNP+ SA P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ R+ AD A +L+A+AGFD D Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARDLNAFVHVDAELT---LAQAKAADAALANGEAGPLAGL---PIVHKDVFVTRG-WRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTNMDEFA-MGSSNENSAF----GPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia mallei GN=gatA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.240e-24 Identity = 87/241 (36.10%), Postives = 119/241 (49.38%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHR---LNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I LN +H E+ L+QA AD AG L GL PI+ KD T+ +TAGS L P DA VV +L AG + LGK ++ E++ SS S F G KNP+ SA P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ R+ AD A +L+A+AGFD D Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARDLNAFVHVDAELT---LAQAKAADAALANGEAGPLAGL---PIVHKDVFVTRG-WRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTNMDEFA-MGSSNENSAF----GPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURM9 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia mallei (strain NCTC 10229) GN=gatA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.240e-24 Identity = 87/241 (36.10%), Postives = 119/241 (49.38%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHR---LNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I LN +H E+ L+QA AD AG L GL PI+ KD T+ +TAGS L P DA VV +L AG + LGK ++ E++ SS S F G KNP+ SA P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ R+ AD A +L+A+AGFD D Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARDLNAFVHVDAELT---LAQAKAADAALANGEAGPLAGL---PIVHKDVFVTRG-WRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTNMDEFA-MGSSNENSAF----GPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURM7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia mallei (strain NCTC 10247) GN=gatA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.240e-24 Identity = 87/241 (36.10%), Postives = 119/241 (49.38%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHR---LNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I LN +H E+ L+QA AD AG L GL PI+ KD T+ +TAGS L P DA VV +L AG + LGK ++ E++ SS S F G KNP+ SA P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ R+ AD A +L+A+AGFD D Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARDLNAFVHVDAELT---LAQAKAADAALANGEAGPLAGL---PIVHKDVFVTRG-WRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTNMDEFA-MGSSNENSAF----GPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURM1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=gatA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.240e-24 Identity = 84/239 (35.15%), Postives = 120/239 (50.21%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I L + + V P+ L+QA AD E A G L GL PI KD T+ +TAGS L P DA VV +L+ AG + LGK ++ E++ SS S F G KNP+ +A P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ ++ +D A +L+A+AGFD D Sbjct: 5 SLTELRAALAAKECSAVELAQHYLKRIDAARDL-NAFVHVEPELTLAQAKAADAELARGAGGPLTGL---PIAHKDVFVTRG-WRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEFA-MGSSNENSAF----GAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PROMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus GN=gatA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24 Identity = 82/230 (35.65%), Postives = 118/230 (51.30%), Query Frame = 1 Query: 157 QNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGS-LRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + +++S +L+ + I + LH + +N + A + A K D + +AAG L L G+P +KDN+ TK + TT S L + P ++ V +L KAG I+LGK +L E++ SS S F G KNP+ ++ P L +LG++T GSI P+S VVGLKPT G SR G+I D VGP V+DAA +L IAG D D Sbjct: 12 KGEVSSLELINQQINRIEEVENTLHSYLYLNHEKARASAIKID---EARAAGEELPPLAGVPFAIKDNLCTKG-IPTTCSSKMLEEFIPPYESTVTQRLWKAGGILLGKTNLDEFA-MGSSTETSAF----GPTKNPWDITRVPGGSSGGSAAAVASGLCTAALGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLIAFASSLDQVGPFSTNVSDAAEILQVIAGHDPRD 232
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_METBF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gatA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24 Identity = 82/233 (35.19%), Postives = 117/233 (50.21%), Query Frame = 1 Query: 142 QLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 Q+ K + ++ ++ YL I + ++G I V+ AL QA K D E G L G+PI +KDNI+ N+ GS L + P +A V+ KL AGA+ILGK ++ E++ SS S F G NP+ L P A +LG++T GS+ CP++ VVGLKPT G SR GV+ + VGP+ V D A ++D IAG+D D Sbjct: 9 QVKEKIKESSAEEVTAQYLDTIGKSK--VNGYITVSEKALEQAKKIDVE------GHNGPLAGVPIAIKDNISVVGLPNS-CGSKILEDYIPPFNAYVIEKLLAAGAVILGKTNMDEFA-MGSSTETSYF----GPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVTDIAVLMDVIAGYDRKD 227
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_EUBE2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=gatA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24 Identity = 82/241 (34.02%), Postives = 124/241 (51.45%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRG-LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPR-DAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T +L K + T+ + +E + +I + L+ + + + AL+ A KAD + K AG L G L G+P +KDN+ T+ + T + +LG+ VP A V +L+ AGA+I+GK ++ E++ S+ S F G KNP P N +LG++T GSI P+S VVGLKPT G SR G+I D +GP+C+ V D A +++AIAG D D Sbjct: 7 TAVELAAKIKAGETTATEAMEAVIAQIEKSEDELNCYVTFDKEKALAAAKKADEDIK---AGKLTGPLAGVPFAIKDNMCTEGMLTTCSSK--ILGNFVPTYTADAVERLQNAGAVIIGKTNMDEFA-MGSTTETSAF----GATKNPRNPEHVPGGSSGGSAAAVAANECFAALGSDTGGSIRQPASYCGVVGLKPTYGTVSRYGLIAYGSSLDQIGPLCKDVTDCATIMEAIAGKDDKD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_DECAR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dechloromonas aromatica (strain RCB) GN=gatA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24 Identity = 81/240 (33.75%), Postives = 123/240 (51.25%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLR-KAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A++K+L LA K++S +L +L I RLNP L+ + V+ + Q + D + ++ AAG+ L GIPI KD + ++T GS L V P DA V+ K+ +AG + LGK ++ E++ SS S F G +NP+ P LA + GT+T GSI P++ ++ GLKPT G+ SR G+I D GP+ + D A +L+ + GFD D Sbjct: 4 ASLKELSLALAAKKVSSVELSSLFLDRIERLNPTLNAFVTVDREKSLQMAR-DADARI-AAGTAGPLTGIPIAQKDIFCAEGWLST-CGSKMLANFVSPYDATVIRKMHAEAGLVSLGKTNMDEFA-MGSSNETSFF----GSVRNPWDTQRVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPAALCNLTGLKPTYGVVSRYGMIAFASSLDQGGPMAASAEDCALLLNTMVGFDERD 235 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |