CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURCJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=gatA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24 Identity = 84/239 (35.15%), Postives = 121/239 (50.63%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I L + + V+ D L+QA AD E A G+L GL PI KD T+ +TAGS L P DA VV +L+ AG + LGK ++ E++ SS S F G KNP+ +A P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ ++ +D A +L+A+AGFD D Sbjct: 5 SLTELRAALAAKECSAVELAQHYLKRIDAARDL-NAFVHVDADLTLAQAKAADAELARGAGGALTGL---PIAHKDVFVTRG-WRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEFA-MGSSNENSAF----GAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURCH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia cenocepacia (strain HI2424) GN=gatA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24 Identity = 84/239 (35.15%), Postives = 121/239 (50.63%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I L + + V+ D L+QA AD E A G+L GL PI KD T+ +TAGS L P DA VV +L+ AG + LGK ++ E++ SS S F G KNP+ +A P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ ++ +D A +L+A+AGFD D Sbjct: 5 SLTELRAALAAKECSAVELAQHYLKRIDAARDL-NAFVHVDADLTLAQAKAADAELARGAGGALTGL---PIAHKDVFVTRG-WRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEFA-MGSSNENSAF----GAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURCC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia cenocepacia (strain MC0-3) GN=gatA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24 Identity = 84/239 (35.15%), Postives = 121/239 (50.63%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I L + + V+ D L+QA AD E A G+L GL PI KD T+ +TAGS L P DA VV +L+ AG + LGK ++ E++ SS S F G KNP+ +A P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ ++ +D A +L+A+AGFD D Sbjct: 5 SLTELRAALAAKECSAVELAQHYLKRIDAARDL-NAFVHVDADLTLAQAKAADAELARGAGGALTGL---PIAHKDVFVTRG-WRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEFA-MGSSNENSAF----GAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURCA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia cenocepacia (strain AU 1054) GN=gatA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24 Identity = 84/239 (35.15%), Postives = 121/239 (50.63%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I L + + V+ D L+QA AD E A G+L GL PI KD T+ +TAGS L P DA VV +L+ AG + LGK ++ E++ SS S F G KNP+ +A P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ ++ +D A +L+A+AGFD D Sbjct: 5 SLTELRAALAAKECSAVELAQHYLKRIDAARDL-NAFVHVDADLTLAQAKAADAELARGAGGALTGL---PIAHKDVFVTRG-WRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEFA-MGSSNENSAF----GAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_DESAD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=gatA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24 Identity = 82/243 (33.74%), Postives = 126/243 (51.85%), Query Frame = 1 Query: 121 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEV-NPDALSQADKADYERKVKAAG--SLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 E ++ ++ ++T+ + V+ L +I + P ++ + N +AL QA++ D AAG + + L G+P+++KD +AT + TTAGS L G D+ V KL++AGAII+GKA++ E++ S+ S + NP+ S P +LGT+T GSI P+S VG+KPT G SR G+I D +GP+ RTV DAA VL+ I G D D Sbjct: 6 EKSLTEIHAMLMTKEVTATEAVKACLEQIAKSEPETKALLHICNDEALKQAEEMD------AAGPDASKPLWGVPVVIKDALATNG-IPTTAGSKILEGFTPFYDSTAVAKLKEAGAIIVGKANMDEFA-MGSTTENSAYQTT----TNPWDASRVPGGSSGGSGATVAAGQCYAALGTDTGGSIRLPASFCGCVGVKPTYGRVSRYGMIAYGSSLDQIGPMTRTVEDAARVLNVIGGHDQRD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CLOBL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gatA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24 Identity = 82/246 (33.33%), Postives = 125/246 (50.81%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPAT 849 + + T +L+ ++ + ++ + +L I+ ++ L + V+ + A+ +A + D K++ L+ L GIP+ +KDNI K NT A S L G P DA V K+++ IILGK ++ E++ SS S F KNP+ L P + A +SLGT+T GS+ P+S VVGLKPT G SR+GV+ D VGP+ + V D A + AIAG D D T Sbjct: 3 LTKLTAHELKDMLSNKEVKAEEITKAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDV--KIEKNEELKALSGIPVGIKDNINVKGMQNTCA-SKILEGYTSPYDAHVTEKIKQEEGIILGKLNMDEFA-MGSSTENSAFK----LAKNPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTGGSVRQPASFCGVVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSAIAGLDKKDFTT 240
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURPS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia pseudomallei GN=gatA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24 Identity = 87/241 (36.10%), Postives = 118/241 (48.96%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHR---LNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I LN +H E+ L+QA AD AG L GL PI KD T+ +TAGS L P DA VV +L AG + LGK ++ E++ SS S F G KNP+ SA P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ R+ AD A +L+A+AGFD D Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARDLNAFVHVDAELT---LAQAKAADAALANGEAGPLAGL---PIAHKDVFVTRG-WRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTNMDEFA-MGSSNENSAF----GPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURP6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia pseudomallei (strain 668) GN=gatA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24 Identity = 87/241 (36.10%), Postives = 118/241 (48.96%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHR---LNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I LN +H E+ L+QA AD AG L GL PI KD T+ +TAGS L P DA VV +L AG + LGK ++ E++ SS S F G KNP+ SA P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ R+ AD A +L+A+AGFD D Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARDLNAFVHVDAELT---LAQAKAADAALANGEAGPLAGL---PIAHKDVFVTRG-WRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTNMDEFA-MGSSNENSAF----GPVKNPWDTSAVPGGSSGGSSAAVAAGLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURP1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia pseudomallei (strain 1710b) GN=gatA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24 Identity = 87/241 (36.10%), Postives = 118/241 (48.96%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHR---LNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I LN +H E+ L+QA AD AG L GL PI KD T+ +TAGS L P DA VV +L AG + LGK ++ E++ SS S F G KNP+ SA P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ R+ AD A +L+A+AGFD D Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARDLNAFVHVDAELT---LAQAKAADAALANGEAGPLAGL---PIAHKDVFVTRG-WRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTNMDEFA-MGSSNENSAF----GPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURP0 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia pseudomallei (strain 1106a) GN=gatA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24 Identity = 87/241 (36.10%), Postives = 118/241 (48.96%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHR---LNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I LN +H E+ L+QA AD AG L GL PI KD T+ +TAGS L P DA VV +L AG + LGK ++ E++ SS S F G KNP+ SA P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ R+ AD A +L+A+AGFD D Sbjct: 5 SLTELRAALDAKECSAVELAQHYLKRIDAARDLNAFVHVDAELT---LAQAKAADAALANGEAGPLAGL---PIAHKDVFVTRG-WRSTAGSKMLANYASPFDATVVARLSAAGMVTLGKTNMDEFA-MGSSNENSAF----GPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAGFDERD 233 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |