CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSEF5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gatA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.219e-24 Identity = 82/239 (34.31%), Postives = 115/239 (48.12%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T+ ++ K +S +L + L I +L+P ++ I + D ALSQA AD R A G L G PI KD T+ + T+ GS L P DA VV KL AGA+ LGK ++ E++ +++ S G KNP+ L P L + T+T GSI P++ ++ GLKPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 5 TLAEIARGLADKKFSSVELTQTLLARIAQLDPQINSFISLTQDLALSQAKAADERR---ANGESGALLGAPIAHKDLFCTQG-IRTSCGSKMLDNFKAPYDATVVAKLAAAGAVTLGKTNMDEFAMGSANE-----SSWYGAVKNPWNLEHVPGGSSGGSAAAVAARLLPAATATDTGGSIRQPAAFTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCAILLQGMAGFDPND 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_METI4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylacidiphilum infernorum (isolate V4) GN=gatA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.219e-24 Identity = 80/240 (33.33%), Postives = 126/240 (52.50%), Query Frame = 1 Query: 121 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 E ++K+L+ Q +++ ++VE L I ++P + I +N + +A K KA SL L G+P+ +KDNI + A S L G + P D+ V+ KL+KAGAI+LG+ ++ E++ S++ S G +NP+ P + A +LG++T GSI P++ VGLKPT G SR G+ D +GPI +TV DAA +L+ I+GFD +D Sbjct: 5 ELSVKELRRLLVQKEVSPLEVVENLLCRIAEVDPKIFAYIYLNHERALEASK-------KADISLP-LGGVPVAIKDNINVLGEPCRCA-SRILEGYLAPYDSTVIEKLKKAGAILLGRTNMDEFAMGSSTENSSV-----GITRNPWNTERVPGGSSGGSAAAVAAHEAFCALGSDTGGSIRQPAAFCGCVGLKPTYGRVSRYGLTAFASSLDQIGPITKTVEDAALLLEVISGFDPFD 230
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CLOBJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Kyoto / Type A2) GN=gatA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.219e-24 Identity = 82/246 (33.33%), Postives = 123/246 (50.00%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPAT 849 + + T +L+ ++ + ++ +L I+ ++ L + V+ + A+ +A + D K++ L+ L GIP+ +KDNI K NT A S L G P DA V K++K IILGK ++ E++ SS S F KNP+ L P A +SLGT+T GS+ P+S +VGLKPT G SR+GV+ D VGP+ + V D A + AIAG D D T Sbjct: 3 LTKLTAHELKDILSNKEVKAEEITRAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDV--KIEKNEELKALSGIPVGIKDNINVKGMQNTCA-SKILQGYTSPYDAHVTEKIKKEEGIILGKLNMDEFA-MGSSTENSAFK----LAKNPWDLERVPGGSSGGSAVAVAGCEATLSLGTDTGGSVRQPASFCGIVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSAIAGLDKKDFTT 240
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURCM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=gatA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.219e-24 Identity = 83/239 (34.73%), Postives = 121/239 (50.63%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I L + + V+ D L+QA AD E A G+L GL PI KD T+ +TAGS L P DA VV +L+ AG + LGK ++ E++ SS S F G KNP+ +A P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ ++ +D A +L+A++GFD D Sbjct: 5 SLTELRAALAAKECSAVELAQLYLKRIDAARDL-NAFVHVDADLTLAQAKAADAELARGAGGALTGL---PIAHKDVFVTRG-WRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEFA-MGSSNENSAF----GAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMSGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURA4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia ambifaria (strain MC40-6) GN=gatA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.219e-24 Identity = 83/239 (34.73%), Postives = 121/239 (50.63%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +L+ A + ++ +L + YL I L + + V+ D L+QA AD E A G+L GL PI KD T+ +TAGS L P DA VV +L+ AG + LGK ++ E++ SS S F G KNP+ +A P LA + GT+T GSI P+S V G+KPT G SR G+I D GP+ ++ +D A +L+A++GFD D Sbjct: 5 SLTELRAALAAKECSAVELAQLYLKRIDAARDL-NAFVHVDADLTLAQAKAADAELARGAGGALTGL---PIAHKDVFVTRG-WRSTAGSKMLANYESPFDATVVARLQAAGMVTLGKTNMDEFA-MGSSNENSAF----GAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMSGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ARTAT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Arthrobacter aurescens (strain TC1) GN=gatA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.219e-24 Identity = 84/238 (35.29%), Postives = 120/238 (50.42%), Query Frame = 1 Query: 136 DLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKV--KAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 DL ++T+ ++ + +L I ++ ++ + VN + AL+ A + D R AA L L G+PI +KD I T + TTAGS L G P DA VV KLR A ILGK +L E++ SS S + G +NP+ L P A ++LGT+T GSI P + VG+KPT G SR G I + D +GP+ RTV D+A + + I G D +D Sbjct: 15 DLAAKLASREVTAVEVTQAHLDRIADVDGQVNAFLHVNSEEALAVAAEVDAARAAGGSAAEELHALAGVPIAVKDLIVTIGQP-TTAGSKILEGWHSPYDATVVKKLRAAKMPILGKTNLDEFA-MGSSTEHSAY----GPTRNPWDLDRIPGGSGGGSAAAVAAFEAPLALGTDTGGSIRQPGAVTGTVGVKPTYGAVSRYGAIAMASSLDQIGPVSRTVLDSALLQEVIGGHDPFD 246
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PROAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Propionibacterium acnes GN=gatA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.428e-24 Identity = 82/242 (33.88%), Postives = 120/242 (49.59%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVN-PDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPAT 849 T +L +++S ++ + +L I ++ +H + V+ AL A + D ++ L L G+P+ +KD TK + TTA S L G + P D+ +V + + AG +ILGK +L E++ SS S F G NP+ L P A ++LGT+T GSI P + VG+KPT G TSR GVI + D+ GP RTV DAA + AIAG D D T Sbjct: 8 TAAELGERIAARQISSEEVTQAHLDRISEVDGDIHAFLLVDHAGALDAARRID--ARIADGEHLGPLAGVPLAVKDLFCTKG-IATTASSQMLEGWIPPYDSTIVTRCKDAGMVILGKTNLDEFA-MGSSTETSAF----GPTHNPWDLERVPGGSGGGSAASLASFQAPLALGTDTGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHDAMDQTT 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_MORCA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Moraxella catarrhalis GN=gatA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.428e-24 Identity = 80/243 (32.92%), Postives = 121/243 (49.79%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + ++ +L K + +S +LVE + I+RL+ ++ I + D AL+QA AD K++A G R L G+P+ KDN+ TK + TTAGS L V P DA VV + +G + LGK ++ E++ S S F G NP+ + P V+ G++T GSI P+S + G+KPT G SR G+I D G ++ D AY+L +AG+D D Sbjct: 4 LHHLSVHELADGLKNKQFSSHELVEHFANRINRLDGQINSFITKDFDNALAQAKLAD---KLRAKGDNRPLLGVPMAHKDNLCTKGVL-TTAGSKMLYNFVSPYDATVVDSIANSGFVSLGKLNMDEFA-MGSDNESSYF----GAVHNPWDVQRVPGGSSGGSAAAVAAGFVPVATGSDTGGSIRQPASFCGITGIKPTYGRVSRYGMIAYASSLDQAGTFGKSALDCAYLLAPMAGYDPKD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_LEGPC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella pneumophila (strain Corby) GN=gatA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.428e-24 Identity = 80/239 (33.47%), Postives = 118/239 (49.37%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ L A + +S +L + + +I N L+ I ++ D AL +A AD K G + L GIP+ LKD TK ++NTT S L P DA +V K ++ GAII+GK ++ E++ SS S F G KNP+ P NL ++G++T GSI P++ + G+KPT GL SR G++ D GP ++ D A +L IAGFD D Sbjct: 5 SLAQLSKALHNREFSSVELTQHCINKIQS-NKDLNAFISLDEDQALKEAQSADLVLK---NGEGKPLTGIPMALKDLFCTK-RLNTTCASKMLANFQAPYDATIVTKFKQNGAIIIGKTNMDEFA-MGSSNENSYF----GSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_LEGPA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella pneumophila (strain Paris) GN=gatA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.428e-24 Identity = 80/239 (33.47%), Postives = 118/239 (49.37%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ L A + +S +L + + +I N L+ I ++ D AL +A AD K G + L GIP+ LKD TK ++NTT S L P DA +V K ++ GAII+GK ++ E++ SS S F G KNP+ P NL ++G++T GSI P++ + G+KPT GL SR G++ D GP ++ D A +L IAGFD D Sbjct: 5 SLAQLSKALHNREFSSVELTQHCINKIQS-NKDLNAFISLDEDQALKEAQSADLVLK---NGEGKPLTGIPMALKDLFCTK-RLNTTCASKMLANFQAPYDATIVTKFKQNGAIIIGKTNMDEFA-MGSSNENSYF----GSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKD 233 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |