CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BDEBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bdellovibrio bacteriovorus GN=gatA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.406e-27 Identity = 77/242 (31.82%), Postives = 124/242 (51.24%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPAT 849 A++ ++ A ++++++ +L I LNP L+ +NP A+ +A+ D ++ + L G+P +K+ TK + TTAGS L V P DA V +L+K+G +++GK + E++ S++ + G KNP+ L P L A +LGT+T GSI P+S +VG+KPT G SR G++ D GP+ +V DAA L+ I+GFD D T Sbjct: 6 ASLSEISEAVNNRSISAKEVTLHFLKRIENLNPKLNAFTSLNPQAVQEAEAVD--ARIANGEDVGLLAGVPFGIKEMFCTKG-LTTTAGSKILENFVPPYDATAVARLKKSGIVVMGKLNQDEFAMGSSNE-----TSFHGVVKNPWDLERVPGGSSGGSAAAQASRLVAGTLGTDTGGSIRQPASFCGIVGVKPTYGRVSRYGIVAYASSLDQAGPMVSSVRDAALTLEVISGFDPQDSTT 239
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_THETN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter tengcongensis GN=gatA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.836e-27 Identity = 83/239 (34.73%), Postives = 129/239 (53.97%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T+ +L+ + +++++++ + YL I + P + ++ + + AL +A AD K G + L GIP+++KDNI+T+ + TT S L + P +A VV +L G +ILGK++L E++ SS S F KNP+ LS P + AA +LG++T GSI P+S VVG+KPT GL SR G++ D +GP + V D A VL+AIAG D D Sbjct: 7 TVHELKELLHKREVSAQEVTKSYLERIKEVEPKIDALVTITEEFALERAKVADEMIK---NGEAKDLTGIPVIIKDNISTEG-IRTTCSSKMLENYIPPYNATVVERLLNEGVVILGKSNLDEFA-MGSSTENSAFKTT----KNPWDLSRVPGGSSGGSAAAVAADEAAFALGSDTGGSIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNAIAGHDPMD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_SYNAS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophus aciditrophicus (strain SB) GN=gatA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.398e-27 Identity = 84/242 (34.71%), Postives = 124/242 (51.24%), Query Frame = 1 Query: 121 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEV-NPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPS-GFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + TI +LQ +Q +TS +V G I + +H I + AL +A KAD + + G + L GIP+ LKD T+ + TT GS L + P DA VVVKLR+AGA+ GK ++ E++ S++ GF+ +NP+ L P + +LG++T GSI P++ VVG+KPT G SR G+I D +GP + V D A +L+ IAG+D D Sbjct: 5 QLTIHELQNKIRQGGVTSTAIVNSVFGRIDAVEENVHSYITLMRESALEEAQKADEQIRT---GEINALTGIPVALKDIYCTRG-VRTTCGSLILDNFIPPYDATVVVKLREAGAVFTGKTNMDEFAMGSSTETSYYGFT------RNPWDLERIPGGSSGGSAAAVAADECIAALGSDTGGSIRQPAALCGVVGMKPTYGRVSRFGLIAFASSLDQIGPFTKDVEDCAILLNVIAGYDLRD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_HALHL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=gatA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.131e-27 Identity = 84/243 (34.57%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ A +++SR+L + L I + +P L+ +I V + A + AD AD + AG L G +P++ KD T D + TT GS L P DA VV +L +AGA++LGKA++ E++ SS S F G +NP+ L A P LA + GT+T GSI P++ + + GLKPT G SR G++ D GP RT D A +L +AG D D Sbjct: 1 MHQKTVAEISAALHAGEISSRELTDSLLKRIEQFDPRLNSLITVTAEQARAAADAADARLRAGEAGPLTG---VPLVHKDIFCT-DGVATTCGSRMLEPFRAPYDATVVRRLAEAGAVMLGKANMDEFA-MGSSNETSYF----GPVRNPWDLDAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPAALSGICGLKPTYGRVSRYGMVAFASSLDQAGPFARTAEDLALLLGGMAGLDERD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_HELMI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=gatA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.090e-27 Identity = 84/239 (35.15%), Postives = 124/239 (51.88%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T +L + ++++ ++V+ + L P + + + D AL QA + D K+ A ++ L GIP+ +KDN+ T D + TT S L V P DA VV KL++AGA+++GK +L E++ SS SGF NP+ + P A SLG++T GSI P++ VVGLKPT G SR G+I D +GP R V D A+V++AIAG D D Sbjct: 7 TAHELHDLLVRKEVSATEIVKTQADRMQALEPKIRAFVTLTVDKALEQAARVD--AKIAAGEAIGPLEGIPMAIKDNMCT-DGVRTTCSSKILNNFVPPYDATVVTKLKEAGAVMMGKTNLDEFA-MGSSTENSGFFATC----NPWDIERVPGGSSGGSAASVAAGQAVFSLGSDTGGSIRQPAAFCGVVGLKPTYGAVSRFGLIAFASSLDQIGPFTRDVRDCAHVMNAIAGHDAKD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_GEOUR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter uraniireducens (strain Rf4) GN=gatA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.090e-27 Identity = 88/241 (36.51%), Postives = 123/241 (51.04%), Query Frame = 1 Query: 121 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 E TI +L K+ +++S + L I + P ++ I V P+ AL A+ AD R++ AAG ++ L GIPI LKD TK + TT S L + P DA V +L+ G +++GK + E++ S++ S G+ NP+ L P A +LGT+T GSI P+S VGLKPT G SR GVI D VGP+ R V D A +L A+AGFD D Sbjct: 5 ELTIHELHDKLKKKEVSSVEATRALLARIDAVEPRVNAFITVTPEEALKNAEAAD--RRI-AAGDMQLLTGIPIALKDIFLTKG-VRTTCASRILDNFIPPYDATSVARLKAQGMVLVGKLNQDEFAMGSSTE-----SSYYGKTHNPWNLECIPGGSSGGSAAAIAARQAIATLGTDTGGSIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCAIMLGAVAGFDPKD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_GEOSF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter sp. (strain FRC-32) GN=gatA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.090e-27 Identity = 87/241 (36.10%), Postives = 121/241 (50.21%), Query Frame = 1 Query: 121 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 E TI +L K+ +++S + E L I + P ++ I V D AL A +AD K A G + L GIP+ LKD TK + TT S L + P DA V +L+ GA+++GK + E++ S++ S G+ NP+ L P A +LGT+T GSI P+S VGLKPT G SR GVI D VGP+ R V D A +L+A+AG+D D Sbjct: 5 ELTIHELHDKLKKKEVSSVEATESMLARIEAVEPKVNAFITVTADQALKDAAEAD---KRIADGDMDKLTGIPVALKDIFLTKG-VRTTCASRILENFIPPYDATSVARLKARGAVLVGKLNQDEFAMGSSTE-----SSYFGKTSNPWNLECIPGGSSGGSAAAIAAQQATATLGTDTGGSIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCAIMLEAVAGYDAKD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ACIC1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=gatA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.090e-27 Identity = 83/238 (34.87%), Postives = 123/238 (51.68%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T +L ++++ ++ +L I ++P +H + V+ D A +A + ++ A L L G+P+ LKD T+ M TT GS L G + P DA VV K+R AG +ILGK ++ E++ SS S F G +NP+ LS P A +++GT+T GSI P++ +VG KPT G SR G++ + D GP RTV DAAY+ AIAG D D Sbjct: 8 TAVELAAMIAAREVSAEEVTRAHLDRIAAVDPAVHAFLYVDADGALTAARA-VDARLAAGERLGPLAGVPLALKDVFTTRG-MPTTCGSKILEGWIPPYDATVVQKIRDAGIVILGKTNMDEFA-MGSSTENSAF----GPTRNPWDLSRIPGGSSGGSAAAVAAFEAPLAIGTDTGGSIRQPAAVTGIVGTKPTYGGVSRYGLVAFSSSLDQAGPFARTVLDAAYLHAAIAGHDPRD 238
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_METFK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gatA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.111e-27 Identity = 84/239 (35.15%), Postives = 120/239 (50.21%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++K L +++S +L + YL I +LNP ++ I VNP+ +L+QA AD A G L GIPI KD K TT GS L + P DAG++ + AGA+ LGK ++ E++ SS S F G+ +NP+ S P L A + GT+T GSI P+S + GLKPT GL SR G+I D GP+ + D A +++ + GFD D Sbjct: 5 SLKQLADMLASKEISSVELTQEYLNRIAQLNPEINAYITVNPELSLAQAQAADQRI---ANGDAGPLTGIPIAQKDIFCAKG-WRTTCGSRMLENFIAPYDAGIIERFNAAGAVNLGKTNMDEFA-MGSSNETSYF----GKVQNPWDRSRVPGGSSGGSAAAVAARLCAAATGTDTGGSIRQPASLCGLSGLKPTYGLASRYGMIAFASSLDQAGPMAHSAEDMALMMNVMTGFDERD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_DESAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfatibacillum alkenivorans (strain AK-01) GN=gatA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.111e-27 Identity = 83/244 (34.02%), Postives = 126/244 (51.64%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPR-DAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + E TI + +++S+ L + L I + P + + V+ + A+ A KAD K A G L GIP+ +KD + TK + T A +LG+ VP DA + KL++AGA+++GK ++ E++ SS S F KNP+ L+ P ++ + G++T GSI P S SVVGLKPT G SR G++ D +GP +TV DAA +L A+AG+D D Sbjct: 3 LHELTIGQAREKLLSKEISSQDLTKAVLDRIEAVEPQVDAYLTVSKEEAMEAAQKAD---KALAQGETAPLCGIPLAIKDVMCTKGVLTTCASK--ILGNFVPPYDATSITKLKEAGAVLVGKTNMDEFA-MGSSTENSAFKTT----KNPWDLTRTPGGSSGGSAAAVAADMCLGAFGSDTGGSIRQPGSHCSVVGLKPTYGRVSRYGLVAFASSLDQIGPFAKTVEDAAILLQAVAGYDPSD 236 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |