CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CLOPH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=gatA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.111e-27 Identity = 91/252 (36.11%), Postives = 126/252 (50.00%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKV-KAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD-PATRAAS 861 I + T +L KQ +L+ + V+ I + P H I VN + AL QA K + K A S L G+PI +KDNI K M TT S L + P +A V+ +L+ AGAIILGK ++ E++ S+ S F G KNP+ + P A ++LGT+T GSI PS+ V G+KPT G SR G++ D +GPI R+V+D A L I+G D D +AAS Sbjct: 3 ITKLTAIELSKKIKQKELSVEEAVKATFSAIKKREPYYHSYITVNEEEALEQASKIQIAIEAGKFADS--PLAGVPIAIKDNICVKG-MRTTCASKILEDFIPPYNASVIERLKDAGAIILGKTNMDEFA-MGSTTETSYF----GATKNPWNIECIPGGSSGGSAAAVAAEEAFIALGTDTGGSIRQPSAFCGVTGIKPTYGTVSRYGLVAYASSLDQIGPIARSVSDCAATLQVISGADDKDSTCVKAAS 246
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BIFLI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=gatA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.190e-26 Identity = 87/232 (37.50%), Postives = 119/232 (51.29%), Query Frame = 1 Query: 148 AFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A K+ +TSR+LVE +L I P + ++V+ D AL QAD D + + +L L G+PI +KD I TK + TTA S L G V P DA V+ KL+ AG ILGK +L E++ SS S + NP+ P A ++LGT+T GSI P + VG+KPT G SR G I + D +GP+ RTV D+A + + I G D D Sbjct: 19 AIKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFD-AKSAEDKAALPELAGVPIAIKDMIVTKG-IETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNLDEFAQ-GSSTEHSAYQTT----HNPWDTERVPGGSGGGSASAVAAFEAPIALGTDTGGSIRQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGHDKRD 243
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BIFLO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium longum GN=gatA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.554e-26 Identity = 87/232 (37.50%), Postives = 119/232 (51.29%), Query Frame = 1 Query: 148 AFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A K+ +TSR+LVE +L I P + ++V+ D AL QAD D + + +L L G+PI +KD I TK + TTA S L G V P DA V+ KL+ AG ILGK +L E++ SS S + NP+ P A ++LGT+T GSI P + VG+KPT G SR G I + D +GP+ RTV D+A + + I G D D Sbjct: 19 AVKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFD-AKSAEDKAALPELAGVPIAIKDMIVTKG-IETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNLDEFAQ-GSSTEHSAYQTT----HNPWDTERVPGGSGGGSASAVAAFEAPIALGTDTGGSIRQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGHDKRD 243
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BIFLD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium longum (strain DJO10A) GN=gatA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.554e-26 Identity = 87/232 (37.50%), Postives = 119/232 (51.29%), Query Frame = 1 Query: 148 AFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A K+ +TSR+LVE +L I P + ++V+ D AL QAD D + + +L L G+PI +KD I TK + TTA S L G V P DA V+ KL+ AG ILGK +L E++ SS S + NP+ P A ++LGT+T GSI P + VG+KPT G SR G I + D +GP+ RTV D+A + + I G D D Sbjct: 19 AVKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFD-AKSAEDKAALPELAGVPIAIKDMIVTKG-IETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNLDEFAQ-GSSTEHSAYQTT----HNPWDTERVPGGSGGGSASAVAAFEAPIALGTDTGGSIRQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGHDKRD 243
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PROMM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9313) GN=gatA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.030e-26 Identity = 82/237 (34.60%), Postives = 122/237 (51.48%), Query Frame = 1 Query: 130 IKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 I + + K ++++R+L + L I ++P LH +++ D ++AD + + A SL L G+P+ +KDN+ TK + TT S L V P ++ V +L +AGA++LGK +L E++ SS S F G NP+ +S P +LG++T GSI P+S VVGLKPT G SR G++ D VGP VADAA +L IAG D D Sbjct: 3 IAEWRQQLKLGEVSARELTDHQLARIAVVDPTLHAFLDITADR-ARADADRIDEALAAGESLPPLAGVPLAIKDNLCTKG-IRTTCSSRMLETFVPPYESTVTERLWQAGAVLLGKTNLDEFA-MGSSTETSAF----GATSNPWDISRVPGGSSGGSAAAVAAGECMAALGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFTTNVADAAELLQVIAGSDPRD 232
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PROM3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9303) GN=gatA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.030e-26 Identity = 82/237 (34.60%), Postives = 123/237 (51.90%), Query Frame = 1 Query: 130 IKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 I + + K ++++R+L++ L I ++P LH ++V + ++AD + + A SL L G+P+ +KDN+ TK + TT S L V P ++ V +L +AGA++LGK +L E++ SS S F G NP+ +S P +LG++T GSI P+S VVGLKPT G SR G++ D VGP VADAA +L IAG D D Sbjct: 3 IAEWRQQLKLGEVSARELIDHQLARIAVVDPTLHAFLDVTAER-ARADADRIDEALAAGESLPPLAGVPLAIKDNLCTKG-IRTTCSSRMLETFVPPYESTVTERLWQAGAVLLGKTNLDEFA-MGSSTETSAF----GATSNPWDISRVPGGSSGGSAAAVAAGECMAALGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFTTNVADAAELLQVIAGSDPRD 232
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PELPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelobacter propionicus (strain DSM 2379) GN=gatA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.030e-26 Identity = 85/241 (35.27%), Postives = 122/241 (50.62%), Query Frame = 1 Query: 121 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + T+ +L K +++SR+ L I L P ++ I V P+ AL++A+ AD R++ AAG L GIP+ +KD T+ + TT GS L + P A KL++ G ++LGK + E++ S++ S G +NP+ P A V+LGT+T GSI P+S VGLKPT G SR GVI D VGP+ R V D A +L A+AG D D Sbjct: 5 DLTLHELHAKLKSKEVSSREATSAMLDRIAELEPRINAFITVTPERALAEAEAAD--RRI-AAGEADVLTGIPLAVKDIFLTEGTL-TTCGSRILNNFIPPYSATSFEKLKQRGMVLLGKLNQDEFAMGSSNE-----SSASGPCRNPWNTDCIPGGSSGGSAAAIAARQATVTLGTDTGGSIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPLTRDVTDCAIMLGALAGHDPKD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PELCD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=gatA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.030e-26 Identity = 89/243 (36.63%), Postives = 121/243 (49.79%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDA-LSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + TI +LQ K +++SR+L + +L I + + I + +A L A+ AD AAG+ L GIP+ LKD T+ M TT S L V P V KL++ A+ILGK ++ E++ SS S F G KNP+ P A +LGT+T GSI P+S VVGLKPT G SR GVI D VGP+ R V D A +L A+AG+D D Sbjct: 3 LTDLTIHELQALLKNREISSRELTQAFLTRIADTDQRIGAFITQSEEAALKNAEAADARL---AAGNAASLTGIPLALKDIFITEG-MRTTCASRILDNFVPPYSGTAVRKLQEQDAVILGKLNMDEFA-MGSSNENSAF----GTVKNPWNQDCVPGGSSGGSAACVAARQAVATLGTDTGGSIRQPASHCGVVGLKPTYGRVSRYGVIAYASSLDQVGPLTRDVEDCALMLGAVAGYDPAD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_EXIS2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=gatA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.030e-26 Identity = 88/247 (35.63%), Postives = 125/247 (50.61%), Query Frame = 1 Query: 121 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAAS 861 E +K+L K ++ +LV+ I R++ + + +N DA QA + D K +A L G+PI +KDNI TK M TT GS L V DA VV +L +AGAI +GK ++ E++ SS S + +NP+ P SLG++T GSI P++ VVGLKPT GL SR G++ D +GP+ RTV D AY+L AIAG H D + +A+ Sbjct: 5 EHGVKNLHTLVKDGEVKVSELVQESFDRIDRVDGKIGAFLSLNEDAFEQAKRMDEIAKHEA----NPLFGLPIGVKDNIVTKG-MTTTCGSKFLENFVPAHDATVVERLHEAGAITIGKLNMDEFA-MGSSNENSAYK----PVRNPWNTKHVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGLVSRYGLVAFASSLDQIGPLTRTVEDNAYLLSAIAG--HCDMDSTSAN 239
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ANASP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anabaena sp. (strain PCC 7120) GN=gatA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.030e-26 Identity = 85/240 (35.42%), Postives = 123/240 (51.25%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A+I++L + + ++ ++ + L I L P LH + + AL QA D K+ A + L GIPI +KDN+ TK + TT S L V P ++ V KL AGA+++GK +L E++ SS S + NP+ LS P V+LG++T GSI P+S VVGLKPT GL SR G++ D +GP ++V D A +L AIAG+DH D Sbjct: 2 ASIRELHEQLVKKERSAVEITQETLDHIQELEPKLHSFLHITAQQALEQARAVD--AKIAAGEEIGLLAGIPIGVKDNMCTKG-IPTTCASRILENFVPPYESTVTQKLLDAGAVVVGKTNLDEFA-MGSSTENSAYQVTA----NPWDLSRVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQPASFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFGKSVEDTAILLKAIAGYDHQD 233 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |