CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ACIC5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.992e-19 Identity = 72/196 (36.73%), Postives = 94/196 (47.96%), Query Frame = 1 Query: 253 DALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 DALS+ ++A + G+P +KD + T + M TA S L G P A V +L AGA+++GK + E++ SS S + G KNP L P N+A +LGT+T GSI P+S VVG+ PT G SR G+I D VGP TV DAA VL IAG D D Sbjct: 57 DALSREERAKLP-----------MGGVPFGIKD-VLTVEGMPATASSKILEGYRPPYTATAVQRLIDAGAVLVGKLNCDEFA-MGSSNENSAY----GPVKNPRALDRVPGGSSGGSAAAVAANMAVATLGTDTGGSIRQPASFCGVVGVLPTYGRVSRYGLIAFASSLDRVGPFAHTVRDAAEVLGVIAGHDPMD 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_WOLPP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.132e-19 Identity = 74/247 (29.96%), Postives = 121/247 (48.99%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 +R TI ++ ++ ++ +LVE ++ + N L+ I P+ +A K E +K + L GIP+ +KD TK + TTA S L + ++ V L K+GA +LGK ++ E++ S+ S F G +N ++ +D P L A +LG++T GS+ P++ VVG+KPT G SR G+I D G I R+V+D+A +L+ I G+D D Sbjct: 4 LRRLTITEMHDGLRRRNFSAVELVETHINAVE--NEQLNAFITKTPEIAIKAAKIADEHFLKQKDDIPPLMGIPVGVKDLFCTKG-IKTTACSKMLENFIPTYESTVSNLLLKSGAAVLGKLNMDEFA-MGSANTNSYF----GPVENVWIRKSDGAKVVPGGSSGGSAASVAGFLCAGALGSDTGGSVRQPAAYCGVVGIKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLEIICGYDEKD 242
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_THEYD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.132e-19 Identity = 65/173 (37.57%), Postives = 89/173 (51.45%), Query Frame = 1 Query: 322 LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 L GIPI +KDNI TK + TT S L P ++ V KL I++GK ++ E++ SS SGF KNP+ L P + +LG++T GSI P+S VVGLKPT G SR G++ D +GPI + VADAA +++ I+G D D Sbjct: 70 LTGIPIAVKDNICTKGIL-TTCASKILYNFYPPYESTVTSKLLNNKYILIGKTNMDEFA-MGSSTENSGFHVT----KNPWDLERVPGGSSGGSAAAVAADECIAALGSDTGGSIRQPASFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITKCVADAALLMNVISGHDPMD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_SULDN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.132e-19 Identity = 69/225 (30.67%), Postives = 105/225 (46.67%), Query Frame = 1 Query: 166 LTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 +T ++ ++ E+ L IE NP+ + D + G G+PI +KDNI KD + T+GS L G + P +A V+ K+ AG G+ ++ E++ S S F G+ NP+ P LA +LG++T GSI P+S +VG+KPT G SR G+ D +GP+ + V DAA + D I+G D D Sbjct: 2 ITLKEALKLSKDELENFKNDLKAKIEANPELNAYID-------IYNIGD-----GVPIAIKDNIQVKD-WSVTSGSNILQGYIAPYNATVIEKMLSAGLSPFGRTNMDEFA--MGSTTESSFYGKT---LNPHNKDCVPGGSSGGSAAAVGAGLAIAALGSDTGGSIRQPASFCGIVGMKPTYGRVSRYGLGAYASSLDQIGPMTQNVEDAAILYDIISGHDEKD 208
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_STRPS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain CGSP14) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.132e-19 Identity = 73/238 (30.67%), Postives = 111/238 (46.64%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI++L ++++ +L + L +I L+ + + + KA E + A L G IP+ +KDNI+T D + TTA S L DA V + G I++GK ++ E++ SG + G KN + S P +SLG++T GSI P++ N +VGLKPT G SR G+I D +GP TV + A +L+AIA D D Sbjct: 7 TIEELHNLLVSKEISATELTQATLEDIKSREEALNSFVTIAEEQALVQAKAIDEAGIDADNVLSG---IPLAVKDNIST-DGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTNMDEFA-----MGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKD 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_RICPR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rickettsia prowazekii GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.132e-19 Identity = 74/247 (29.96%), Postives = 115/247 (46.56%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ + K TS++LV Y+ +I + L V E AL QA+ AD A R L GIP +KD TK + TTA S L + ++ V + G +ILGK ++ E++ S+ S F G +P+ + D P +A+ +LG++T GS+ P+S +VG KPT G SR G++ D G R+V D++ +L+A+ GFD D Sbjct: 4 LNKLTVAESVKGLKNKDFTSKELVNAYIKQIEKYKNLNAYVTETFDLALKQAEAADQNYGQNKA---RTLEGIPFAVKDLFCTKG-IRTTACSNILKNFIPHYESSVTQNIFDKGGVILGKTNMDEFA-MGSANITSCF----GNVISPWKANDDNSDLVPGGSSGGSAAAVSAFMASAALGSDTGGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIFTRSVLDSSIMLEAMMGFDEKD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_RHOS4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.132e-19 Identity = 78/244 (31.97%), Postives = 118/244 (48.36%), Query Frame = 1 Query: 121 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLS---ADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 E TI D + A + +L++ L L I PL + + P+ AL QA AD R A L+GIP+ +KD T+ + + A S L G ++ V KL +AGA++LGK ++ E++ SS S + G NP+ + P +L + GT+T GSI P++ +VG+KPT G SR G++ D GP+ ++V DAA +L A+AG D D Sbjct: 5 ELTIADARDALAKGELSAVDLTMACLTAIDAGTPL-NAFVHATPEIALDQARAADARRGAGAGA----LNGIPLGIKDLFCTRG-VASQAASNILKGFKPEYESTVTSKLFEAGAVMLGKLNMDEFA-MGSSNETSCY----GDAVNPWKVDDRRLTPGGSSGGSAAAVAADLCLAATGTDTGGSIRQPAAFTGIVGIKPTYGRVSRWGIVAFASSLDQAGPMTKSVRDAAILLGAMAGHDPKD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_HALSA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Halobacterium salinarium GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.132e-19 Identity = 67/179 (37.43%), Postives = 93/179 (51.96%), Query Frame = 1 Query: 322 LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAA 858 L G + +KDNI+TK + TT GS L P +A VV L AG I+GK ++ E+ +++ S F G KNP + P A ++LG++T GS+ P++ VVGLKPT GL SR G++ + +GPI TV AA +LD IAG D +D TR A Sbjct: 20 LDGTTVAVKDNISTKG-VPTTCGSKMLADYEPPYNATVVEDLLAAGGTIVGKTNMDEFGMGTTTET-SYF----GPTKNPVDETRVPGGSSGGSAAAVANGDADLALGSDTGGSVRAPAAYCGVVGLKPTYGLVSRYGLVAYANSLEQIGPIAPTVEGAAELLDVIAGPDEHDGTTRDA 192
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BRUAB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brucella abortus GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.132e-19 Identity = 76/243 (31.28%), Postives = 110/243 (45.27%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI + + K +T+ +L + YL I N ++ + V D KA ER K G L GIP+ +KD ATK ++T A S+ L G ++ V L GA++LGK ++ E + SS S + G KNP+ P +L A + T+T GSI P++ VG+KPT G SR G + D GPI R V DAA ++ ++A D D Sbjct: 8 TIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASDERIAK--GEAGALEGIPLGVKDLFATKG-VHTQACSHILDGFKPEYESTVTANLWADGAVMLGKLNMDEVA-MGSSNETSYY----GPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDTGGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDLKD 242
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BRUA2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brucella abortus (strain 2308) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.132e-19 Identity = 76/243 (31.28%), Postives = 110/243 (45.27%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI + + K +T+ +L + YL I N ++ + V D KA ER K G L GIP+ +KD ATK ++T A S+ L G ++ V L GA++LGK ++ E + SS S + G KNP+ P +L A + T+T GSI P++ VG+KPT G SR G + D GPI R V DAA ++ ++A D D Sbjct: 8 TIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASDERIAK--GEAGALEGIPLGVKDLFATKG-VHTQACSHILDGFKPEYESTVTANLWADGAVMLGKLNMDEVA-MGSSNETSYY----GPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDTGGSIRQPAAFTGTVGIKPTYGRVSRWGTVAFASSLDQAGPIARDVRDAAILMKSMASLDLKD 242 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |