CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_STRSV (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus sanguinis (strain SK36) GN=gatA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.919e-18 Identity = 79/239 (33.05%), Postives = 117/239 (48.95%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI++L + ++++ +L + L +I + I V+ + AL+QA D K + + GIP+ +KDNI+TK + TTA S L DA V KL II+GK ++ E++ SS+ S F KN + S P +SLG++T GSI P+S N VVGLKPT G SR G+I D +GP +TV + A +L+ I+G D D Sbjct: 7 TIEELHDLLVKKEISAVELTQATLADIKEREAAVDSFITVSEEEALAQAAALD----AKGIDADNLMSGIPLAVKDNISTKGIL-TTAASKILYNYKPIFDATSVEKLYGKDMIIVGKTNMDEFAMGGSSEN-SYFKTT----KNAWDSSKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKD 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSYCK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Psychrobacter cryohalolentis (strain K5) GN=gatA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.919e-18 Identity = 68/237 (28.69%), Postives = 112/237 (47.26%), Query Frame = 1 Query: 133 KDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVI-EVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + L + + +S +L + Y+ I+ L+ ++ I + A +QA AD +++ G R L G+P+ KD T+ + TT GS L + P DA +V + KAG I LGK ++ E++ ++ S G NP+ ++ P V+ G++T GSI P+S + G+KPT G SR G+I D G + R+ D A++L + G D D Sbjct: 10 QQLITGLQDKQFSSLELTDHYIKRINALDSKINSFITHTSETARAQAKAAD---EMRVQGDKRPLLGVPMAHKDIFCTQGVL-TTCGSKMLHNFISPYDATIVTNIDKAGMISLGKLNMDEFAMGSDNE-----SSYYGAVHNPWNIAHVPGGSSGGSAAAVAAGFVPVATGSDTGGSIRQPASFCGLTGIKPTYGRVSRFGMIAYASSLDQAGSMGRSAMDCAFLLQPMIGHDPRD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_FRATO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=gatA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.919e-18 Identity = 72/238 (30.25%), Postives = 113/238 (47.48%), Query Frame = 1 Query: 130 IKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEV-NPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 IK L+ ++++ +L + YL +I + ++ +I + +AL +A+ AD + +AG L GIPIL KD TK + TTA S L V P D+ V + G + LGK ++ E++ S+ S + G NP+ L P A +S G++T GS+ P+S + +KP+ G TSR G++ D G D A +LDAIAG +D Sbjct: 4 IKKLRARLDSGEISAVELTKEYLAKIKEQDKRINSIITLCEAEALKEAEDAD---AIISAGKQGLLTGIPILHKDLFCTKG-IRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA-MGSTNEYSYY----GAVSNPWDLERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPASFCGLTAMKPSYGSTSRFGMVAFASSFDQAGIFGHYAEDVAIMLDAIAGECEFD 232
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_FRATH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Francisella tularensis subsp. holarctica (strain LVS) GN=gatA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.919e-18 Identity = 72/238 (30.25%), Postives = 113/238 (47.48%), Query Frame = 1 Query: 130 IKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEV-NPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 IK L+ ++++ +L + YL +I + ++ +I + +AL +A+ AD + +AG L GIPIL KD TK + TTA S L V P D+ V + G + LGK ++ E++ S+ S + G NP+ L P A +S G++T GS+ P+S + +KP+ G TSR G++ D G D A +LDAIAG +D Sbjct: 4 IKKLRARLDSGEISAVELTKEYLAKIKEQDKRINSIITLCEAEALKEAEDAD---AIISAGKQGLLTGIPILHKDLFCTKG-IRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA-MGSTNEYSYY----GAVSNPWDLERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPASFCGLTAMKPSYGSTSRFGMVAFASSFDQAGIFGHYAEDVAIMLDAIAGECEFD 232
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_FRATF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=gatA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.919e-18 Identity = 72/238 (30.25%), Postives = 113/238 (47.48%), Query Frame = 1 Query: 130 IKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEV-NPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 IK L+ ++++ +L + YL +I + ++ +I + +AL +A+ AD + +AG L GIPIL KD TK + TTA S L V P D+ V + G + LGK ++ E++ S+ S + G NP+ L P A +S G++T GS+ P+S + +KP+ G TSR G++ D G D A +LDAIAG +D Sbjct: 4 IKKLRARLDSGEISAVELTKEYLAKIKEQDKRINSIITLCEAEALKEAEDAD---AIISAGKQGLLTGIPILHKDLFCTKG-IRTTAASKMLDNFVAPYDSTVTKNCKDQGMVTLGKLNMDEFA-MGSTNEYSYY----GAVSNPWDLERVPGGSSGGSAAAVAAGFAPISTGSDTGGSVRQPASFCGLTAMKPSYGSTSRFGMVAFASSFDQAGIFGHYAEDVAIMLDAIAGECEFD 232
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BACSK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus clausii (strain KSM-K16) GN=gatA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.919e-18 Identity = 65/168 (38.69%), Postives = 84/168 (50.00%), Query Frame = 1 Query: 322 LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAG 825 L G+PI +KDNI TK + TT S L DA VV KLR A + +GK ++ E++ SS S F YV P +LG++T GSI P++ VVGLKPT G SR G++ D +GPI RTV D AY+L+AIAG Sbjct: 69 LFGMPIGIKDNIVTKG-LRTTCSSKILENFDPIYDATVVTKLRGAETVTIGKINMDEFA-MGSSNENSAFQVTTNPWNTDYV----PGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLEAIAG 230
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_WOLWR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=gatA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.010e-17 Identity = 76/248 (30.65%), Postives = 122/248 (49.19%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRG-LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 +R+ +I + K+ ++ +LVE ++ + N L+ I P+ +A KA E + L L G+P+ +KD TK + TTA S L V ++ V L K+GA +LGK ++ E++ S+ S F G +N ++ +D P L A +LG++T GS+ P++ VVG+KPT G SR G+I D G I R+V+D+A +L+AI G+D D Sbjct: 4 LRKLSITQMHDGLKKKSFSAVELVEAHISAVE--NEKLNAFITKTPEIAMKAAKAADEHFSRQKDDLISPLMGVPVGIKDLFCTKG-IKTTACSKMLENFVPTYESTVSDLLLKSGAAMLGKLNMDEFA-MGSANTNSYF----GPVENVWIRKSDGEKVVPGGSSGGSAASVAGFLCAGALGSDTGGSVRQPAAYCGVVGIKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLEAICGYDTKD 243
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_WOLPM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Wolbachia pipientis wMel GN=gatA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.010e-17 Identity = 76/248 (30.65%), Postives = 122/248 (49.19%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRG-LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 +R+ +I + K+ ++ +LVE ++ + N L+ I P+ +A KA E + L L G+P+ +KD TK + TTA S L V ++ V L K+GA +LGK ++ E++ S+ S F G +N ++ +D P L A +LG++T GS+ P++ VVG+KPT G SR G+I D G I R+V+D+A +L+AI G+D D Sbjct: 4 LRKLSITQMHDGLKKKSFSAVELVEAHISAVE--NEKLNAFITKTPEIAMKAAKAADEHFSRQKDDLISPLMGVPVGIKDLFCTKG-IKTTACSKMLENFVPTYESTVSDLLLKSGAAMLGKLNMDEFA-MGSANTNSYF----GPVENVWIRKSDGEKVVPGGSSGGSAASVAGFLCAGALGSDTGGSVRQPAAYCGVVGIKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLEAICGYDTKD 243
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_RICAH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rickettsia akari (strain Hartford) GN=gatA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.010e-17 Identity = 74/247 (29.96%), Postives = 114/247 (46.15%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ D K TS++LV ++ +I + L V E AL QA+ AD A R L GIP KD TK + TTA S L V ++ V + G ++LGK ++ E++ S+ S F G +P+ + D P +A+ +LG++T GS+ P+S +VG KPT G SR G++ D G R+V D++ +L+A+ GFD D Sbjct: 4 LNKLTVADSIKGLKNKDFTSKELVNAHITQIEKHRNLNAYVTETFDLALKQAEAADQNY---AQNQPRTLEGIPFAAKDLFCTKG-IRTTACSNILKNFVPNYESSVTQNIFDKGGVMLGKTNMDEFA-MGSANITSCF----GNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDTGGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIFTRSVLDSSIMLEAMMGFDAKD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PELLD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelodictyon luteolum (strain DSM 273) GN=gatA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.010e-17 Identity = 77/246 (31.30%), Postives = 114/246 (46.34%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEI--HRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRA 855 ++ +DL+ + +T + YL I H + + V E +AL +A D K+ G+ L G+P+ +KDNI+ K T A S L G DA V++L AI LGK ++ E++ SS S F G NP+ P LA V+LG++T GS+ P+ +VGLKPT G SR G++ D +G + DAA VL+ +AG D D + A Sbjct: 4 SSYEDLRSRLLSHAVTCEAVARHYLDRIRSHEGDNIYITVFE--NEALQRARSLDL--KLAGGGTPGRLFGMPMAIKDNISMKGAPLTCA-SKMLEGYTSVYDATAVLRLEAEDAIFLGKTNMDEFA-MGSSNENSAF----GPVPNPFDNQRVPGGSSGGSAAAVAAGLAMVALGSDTGGSVRQPAGFCDIVGLKPTYGRISRYGLVAFASSFDQIGVLALNCDDAALVLEVMAGVDGKDATSSA 239 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |