CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_EHRRG (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ehrlichia ruminantium (strain Gardel) GN=gatA PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 1.010e-17 Identity = 77/247 (31.17%), Postives = 123/247 (49.80%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYV----LSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 I + +I ++ + + ++ +L + ++ I+ N L+ I P+ AL+ A KAD+ + L GIP+ +KD TK+ + TTA S L D+ VV +L GA++LGK ++ E++ SS + S F G +NP+ + P L A +LG++T GS+ P++ +VGLKPT G SR+G+I D G + RTV DAA +L I G+D D Sbjct: 4 ILKLSIAEMHENLIKKEFSAVELTQAHIDAIN--NEQLNAFITKTPEVALNAARKADHIL-THEQDKITSLTGIPVGIKDLFCTKN-IKTTACSNILRNFTPQYDSTVVKRLIDDGAVMLGKLNMDEFA-MGSSNSNSCF----GPVENPWTRADGVKVVPGGSSGGSSAAVAGFLCAGALGSDTGGSVRQPAAFCGIVGLKPTYGRCSRSGMIAFASSLDQAGVLTRTVKDAALMLQPICGYDTQD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CHLTE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium tepidum GN=gatA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.010e-17 Identity = 69/236 (29.24%), Postives = 115/236 (48.73%), Query Frame = 1 Query: 133 KDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 +DL+ +LT Q++ YL I + + +A+++A + D K++ + L G+PI +KDNIA K + A S L G DA V+ +++ AI +G+ ++ E++ S++ + G NPY + P +LA V+LG++T GS+ P+ +++GLKPT G SR G++ D +G + DAA VL IAG D +D Sbjct: 7 EDLRSRLLSGELTCEQVISDYLQRIDSSRDDNIFTVVFHDEAMARARELD--SKLQRGEAPGVLFGMPIAIKDNIAMKGAPLSCA-SKILAGYESVYDATVIKRMQAEDAIFVGRTNMDEFAMGSSNE-----NSAIGPVPNPYDKTRVPGGSSGGSAAAVANDLAMVALGSDTGGSVRQPAGFCNIIGLKPTYGRISRYGLVAFASSFDQIGLLAANCDDAALVLGVIAGKDEHD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_AKKM8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=gatA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.010e-17 Identity = 62/173 (35.84%), Postives = 85/173 (49.13%), Query Frame = 1 Query: 322 LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 L GIPI +KDNI + T S L V P DA + L++AG I LG+ ++ E++ SG + G +NP P A +LG++T GSI P+ +VGLKPT G SR G++ D +GP+ RTV DAA +L AI+G D D Sbjct: 63 LAGIPIAVKDNINVLGQP-TRCASRLLSPYVAPYDATSIRLLKEAGGIPLGRTNMDEFA-----MGASGENSAYGITRNPEAPDRIPGGSSSGSAAAVASATAIAALGSDTGGSIRQPAGHCGIVGLKPTYGRVSRYGLVAFASSLDQIGPMTRTVEDAAILLQAISGHDRKD 229
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_TREPS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Treponema pallidum subsp. pallidum (strain SS14) GN=gatA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.319e-17 Identity = 75/216 (34.72%), Postives = 99/216 (45.83%), Query Frame = 1 Query: 226 LHGVIEVNPDALSQADKADYER-----KVKAAGSLRG------LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 L ++E DA A AD R K AG+ G L G+P +KDNI+ K K + T GS L P DA VV +LR AGAI LG+ ++ E++ SS S + G +NP S A +LGTET GS+ P++ + GLKPT GL SR GV+ D +G + D A L +G D YD Sbjct: 46 LGALVEFFSDAEEHARTADNLRASCAQSTKTAGANGGSVSGKPLLGLPFAVKDNISVKGK-HCTCGSKLLADYRAPYDATVVARLRAAGAIPLGRTNMDEFA-MGSSTEYSVY----GPTRNPRDRSRTSGGSSGGSAAAVAGGQAPFALGTETGGSVRLPAAYCGLYGLKPTYGLLSRYGVVAFGSSLDQIGFFATCIDDIALALSVTSGKDLYD 255
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_TREPA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Treponema pallidum GN=gatA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.319e-17 Identity = 75/216 (34.72%), Postives = 99/216 (45.83%), Query Frame = 1 Query: 226 LHGVIEVNPDALSQADKADYER-----KVKAAGSLRG------LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 L ++E DA A AD R K AG+ G L G+P +KDNI+ K K + T GS L P DA VV +LR AGAI LG+ ++ E++ SS S + G +NP S A +LGTET GS+ P++ + GLKPT GL SR GV+ D +G + D A L +G D YD Sbjct: 46 LGALVEFFSDAEEHARTADNLRASCAQSTKTAGANGGSVSGKPLLGLPFAVKDNISVKGK-HCTCGSKLLADYRAPYDATVVARLRAAGAIPLGRTNMDEFA-MGSSTEYSVY----GPTRNPRDRSRTSGGSSGGSAAAVAGGQAPFALGTETGGSVRLPAAYCGLYGLKPTYGLLSRYGVVAFGSSLDQIGFFATCIDDIALALSVTSGKDLYD 255
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_RICRS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rickettsia rickettsii (strain Sheila Smith) GN=gatA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.319e-17 Identity = 73/247 (29.55%), Postives = 114/247 (46.15%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ D K TS +L+ ++ +I + L V E AL QA+ AD A + R L GIP KD TK + TTA S L + ++ V + G ++LGK ++ E++ S+ S F G +P+ + D P +A+ +LG++T GS+ P+S +VG KPT G SR G+I D G R+V D++ +L+A+ GFD D Sbjct: 4 LNKLTVADSIKGLKNKDFTSAELIGAHIKQIEKHRNLNAYVTETFDLALKQAEAADQNY---AQNNARTLEGIPFAAKDLFCTKG-IRTTACSNILKNFIPNYESSVTQNIFDKGGVMLGKTNMDEFA-MGSANITSCF----GNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDTGGSVRQPASFTGLVGFKPTYGRCSRYGMISFASSLDQAGIFTRSVLDSSIMLEAMMGFDEKD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_RICRO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rickettsia rickettsii (strain Iowa) GN=gatA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.319e-17 Identity = 73/247 (29.55%), Postives = 114/247 (46.15%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ D K TS +L+ ++ +I + L V E AL QA+ AD A + R L GIP KD TK + TTA S L + ++ V + G ++LGK ++ E++ S+ S F G +P+ + D P +A+ +LG++T GS+ P+S +VG KPT G SR G+I D G R+V D++ +L+A+ GFD D Sbjct: 4 LNKLTVADSIKGLKNKDFTSAELIGAHIKQIEKHRNLNAYVTETFDLALKQAEAADQNY---AQNNARTLEGIPFAAKDLFCTKG-IRTTACSNILKNFIPNYESSVTQNIFDKGGVMLGKTNMDEFA-MGSANITSCF----GNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDTGGSVRQPASFTGLVGFKPTYGRCSRYGMISFASSLDQAGIFTRSVLDSSIMLEAMMGFDEKD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_RICPU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rickettsia peacockii (strain Rustic) GN=gatA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.319e-17 Identity = 73/247 (29.55%), Postives = 114/247 (46.15%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ D K TS +L+ ++ +I + L V E AL QA+ AD A + R L GIP KD TK + TTA S L + ++ V + G ++LGK ++ E++ S+ S F G +P+ + D P +A+ +LG++T GS+ P+S +VG KPT G SR G+I D G R+V D++ +L+A+ GFD D Sbjct: 4 LNKLTVADSIKGLKNKDFTSTELIGAHIKQIEKHRNLNAYVTETFDLALKQAEAADQNY---AQNNARTLEGIPFAAKDLFCTKG-IRTTACSNILKNFIPNYESSVTQNIFDKGGVMLGKTNMDEFA-MGSANITSCF----GNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDTGGSVRQPASFTGLVGFKPTYGRCSRYGMISFASSLDQAGIFTRSVLDSSIMLEAMMGFDEKD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_METHJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=gatA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.319e-17 Identity = 58/173 (33.53%), Postives = 86/173 (49.71%), Query Frame = 1 Query: 322 LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 L G+ + +KDNI+TK + TT S L G + P DA VV L+ AGA I+GK ++ E+ +++ + G NP P L ++G++T GSI CP++ +VGLKPT G SR G+I + +GP+ R V + + IAG D D Sbjct: 29 LSGVTVAVKDNISTKG-IETTCASKILKGYIPPYDAHVVTLLKNAGAAIVGKTNMDEFGMGTTTE-----NSAYGPTLNPLDHQRVPGGSSGGSAAAVAAGLVDCAIGSDTGGSIRCPAAFCGIVGLKPTYGRVSRFGLIAYANSLEQIGPMARDVQTLSNLYSVIAGHDSRD 195
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CHLAB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydophila abortus GN=gatA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.319e-17 Identity = 65/204 (31.86%), Postives = 96/204 (47.06%), Query Frame = 1 Query: 259 LSQADKADYER------KVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATR 852 LS ++ YE+ KV L L G+PI +KDNI + + TT S L + P DA VV ++ +ILGK ++ E++ S+ S F KNP+ LS P ++LG++T GSI P++ VVG KP+ G SR G++ D +GP+ V D A +D AG D D ++ Sbjct: 42 LSLCEERAYEKAAIIDAKVARGEPLGKLAGVPIGIKDNIHIRG-LRTTCASKMLENYIAPFDATVVERIEAEDGVILGKLNMDEFA-MGSTTQYSAFHPT----KNPWGLSCVPGGSSGGSAAAVSARFCPIALGSDTGGSIRQPAAFCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPLTTVVEDVALAMDVFAGKDDRDATSQ 239 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |