CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CAMLR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=gatA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.319e-17 Identity = 63/200 (31.50%), Postives = 93/200 (46.50%), Query Frame = 1 Query: 241 EVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 E+N A Q Y + G+P+ +KDNI+ KD T S L G V P DA V+ LRK G+ ++ E++ S+ A S + G+ NP+ + P LA SLG++T GS+ P++ VG KP+ G SR G+ + D +G + + V DAA + D IAG+D D Sbjct: 21 ELNQKAKEQKHLGAYVEQFLDKDLSESGDGVPVAIKDNISVKD-WELTCASKILQGYVAPYDASVITNLRKNNLSPFGRCNMDEFA-MGSTSATSFY----GKTLNPHDNTKVPGGSSGGSAAAVASGLAIASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLAAYSSSLDQIGVLTQNVKDAAILYDVIAGYDEKD 214
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BARBK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=gatA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.319e-17 Identity = 77/244 (31.56%), Postives = 111/244 (45.49%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI + + K+ + +L E YL I NP+L+ + V + A+ A ++D AG L G IP+ +KD AT D ++T SY L G ++ V L K GA++LGK ++ E++ SS S + G NP+ P L + T+T GSI P++ VG+KPT G SR G I D GPI R V D A +L ++A FD D Sbjct: 8 TIAQARDSLKKGDFKATELTEAYLQAIELANPILNAYVAVTAEQAMRMAAESDNRLAKGEAGILEG---IPLGIKDLFATYD-VHTQGCSYILDGFKPKYESTVTANLWKDGAVMLGKLNMDEFA-MGSSNETSYY----GPVINPWRKKGSDEKLVPGGSSGGSSAAVAARLCVGATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGTIAYASSLDQAGPIGRDVRDCAIMLRSMASFDRKD 242
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_RICFE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rickettsia felis GN=gatA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.722e-17 Identity = 72/247 (29.15%), Postives = 114/247 (46.15%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ D K TS++LV ++ +I + L V E AL QA+ AD A + L GIP KD TK + TTA S L + ++ V + G ++LGK ++ E++ S+ S F G +P+ + D P +A+ +LG++T GS+ P+S +VG KPT G SR G++ D G R+V D++ +L+A+ GFD D Sbjct: 4 LNKLTVADSVKGLKNKDFTSKELVNAHIKQIEKHKNLNAYVTETFDLALKQAEAADQNY---AQNQPQTLEGIPFAAKDLFCTKG-IRTTACSNILKNFIPNYESSVTQNIFDKGGVMLGKTNMDEFA-MGSANITSCF----GNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDTGGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIFTRSVLDSSIMLEAMMGFDEKD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_MYCGE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycoplasma genitalium GN=gatA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.722e-17 Identity = 75/241 (31.12%), Postives = 111/241 (46.06%), Query Frame = 1 Query: 154 KQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDA--LSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSE--------WSNFRSSKAPSGFS--GRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + N L+ R +++ I+ + ++ IE+N + L + Y +K+ + L+ IP +LKDNIATKD + TT GS L + P A V L GA+++GKA++ E +S F P S G + Y ++ D + S+ T+T SI P+S +VVG KPT GL SR GV P P D VG + V+D A V D + D D Sbjct: 2 RSNILSLRAILDKKPSAINDVLTSINAKIELNKSSNFLLKNTVEIYSKKINKSDEKILLNNIPYVLKDNIATKDIV-TTGGSLFLKNYLPPFSATVFELLEMNGALLVGKANMDEFGLGGTGSYSAFGVVHHPENSSLIAGGSSSGSAYAVAKD---------------IVPFSIATDTGDSIRRPASICNVVGFKPTYGLISRNGVFPYAPSMDHVGIFAKFVSDIAIVSDVVIKHDKTD 226
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_EHRRW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ehrlichia ruminantium (strain Welgevonden) GN=gatA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.722e-17 Identity = 77/247 (31.17%), Postives = 122/247 (49.39%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYV----LSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 I + +I ++ + + ++ +L + ++ I+ N L+ I P+ AL A KAD+ + + L GIP+ +KD TK+ + TTA S L D+ VV +L GA++LGK ++ E++ SS + S F G +NP+ + P L A +LG++T GS+ P++ +VGLKPT G SR G+I D G + RTV DAA +L I G+D D Sbjct: 4 ILKLSIAEMHENLIKKEFSAVELTQTHIDAIN--NEQLNAFITKTPEVALDAARKADHIL-IHEQDKITPLTGIPVGIKDLFCTKN-IKTTACSNILRNFTPQYDSTVVKRLIDDGAVMLGKLNMDEFA-MGSSNSNSCF----GPVENPWTRADGVKVVPGGSSGGSSAAVAGFLCAGALGSDTGGSVRQPAAFCGIVGLKPTYGRCSRLGMIAFASSLDQAGVLTRTVKDAALMLQPICGYDTQD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_STRA3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus agalactiae serotype III GN=gatA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.249e-17 Identity = 73/239 (30.54%), Postives = 117/239 (48.95%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 +I L + ++++ +L + L +IH + I ++ D A++QA + D K + + GIP+ +KDNI+TK + TTA S L DA V KL I++GKA++ E++ S++ S F + N + S P +SLG++T GSI P+S N +VG+KPT G SR G+ D +GP+ +TV + A +L I+G D D Sbjct: 7 SIDQLHDLLVKKEISATELTKATLEDIHAREQAVGSFITISDDMAIAQAKEIDD----KGIDADNVMSGIPLAVKDNISTKGIL-TTAASKMLYNYEPIFDATAVEKLYAKDMIVIGKANMDEFAMGGSTET-SYFK----KTNNAWDHSKVPGGSSGGSAAAVASGQVRLSLGSDTGGSIRQPASFNGIVGMKPTYGRVSRFGLFAFGSSLDQIGPMSQTVKENAQLLTVISGHDVRD 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_RICCN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rickettsia conorii GN=gatA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.249e-17 Identity = 72/247 (29.15%), Postives = 115/247 (46.56%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ D K TS +L+ ++ +I + L V + AL QA+ AD + A + R L GIP KD TK + TTA S L + ++ V + G ++LGK ++ E++ S+ S F G +P+ + D P +A+ +LG++T GS+ P+S +VG KPT G SR G+I D G R+V D++ +L+A+ GFD D Sbjct: 4 LNKLTVADSIKGLKNKDFTSTELIGAHIKQIEKHRNLNAYVTDTFDLALKQAEAADQKY---AQNNARTLEGIPFAAKDLFCTKG-IRTTACSNILKNFIPNYESSVTQNIFDKGGVMLGKTNMDEFA-MGSANITSCF----GNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDTGGSVRQPASFTGLVGFKPTYGRCSRYGMISFASSLDQAGIFTRSVLDSSIMLEAMMGFDEKD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_METTH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanobacterium thermoautotrophicum GN=gatA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.249e-17 Identity = 68/237 (28.69%), Postives = 115/237 (48.52%), Query Frame = 1 Query: 154 KQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVN-PDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAAS 861 K + LT+ + +E +L I N ++ +EV +A+ +A++ D ++ + L G+ I +K NI +D N +A S L DA V+ ++++ II+G ++ E++ SS S F G NP P + ++LG++T GSI P+S V+G KPT G SR G++ + D +GP+ V+ + LD I+G+D DP T +S Sbjct: 14 KNHGLTASENLEKFLKRIEAKNDDINAFLEVRGEEAIKRAEEID--ARIASGKETGKLAGLVIGVKSNINVED-FNVSAASKTLENYTGSYDATVIRRIKEEDGIIIGMTNMDEFAA-GSSTETSFF----GPTDNPAAPGRIPGGSSGGSAAAVAAGMCDLALGSDTGGSIRNPASHCGVMGFKPTYGAVSRQGLLDLAMSFDQIGPLAADVSGISLALDVISGYDPADPTTLDSS 242
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_LACF3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=gatA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.249e-17 Identity = 79/238 (33.19%), Postives = 113/238 (47.48%), Query Frame = 1 Query: 130 IKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDA-LSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 I L K+++ +L + I + + + +N +A L QA A+ ++ A L L GIP+ +KDNI TK + TTA S L DA VV KL AG I +GK +L E++ SS S F KNP+ L+ P +LG++T GSI P+S VG+KPT G SR G+I D +G + ++V D A ++ AIAG D D Sbjct: 8 ISGLHADLVAKKVSATELTKAAFDRIKATDDQVGAFLALNEEAALKQA--AELDQAGIAEDQL--LAGIPLAVKDNIVTKG-LTTTAASKILENFKPVYDATVVEKLNAAGVINVGKVNLDEFA-MGSSTENSAFKTT----KNPWDLTRVPGGSSGGSAAAVAAGDVLGALGSDTGGSIRIPASFTGTVGMKPTYGRVSRWGLIAFGSSFDQIGWLTQSVKDNAILMSAIAGKDDRD 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CAMFF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=gatA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.249e-17 Identity = 64/171 (37.43%), Postives = 86/171 (50.29%), Query Frame = 1 Query: 328 GIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 G+PI +KDNI K+ + T+ S L G V P A VV KL KAG G+ ++ E++ S S F G+ NP + P LA +LG++T GSI P++ VG KPT G SR G+ + D +GPI R+V DAA + D IAG D D Sbjct: 50 GVPIAIKDNIQVKN-WSITSCSKILQGYVAPYHATVVEKLLKAGLAPFGRTNMDEFA--MGSTTESSFYGKT---LNPLDHTRVPGGSSGGSAAAVSAGLAIAALGSDTGGSIRQPAAFCGCVGFKPTYGRVSRYGLGAYSSSLDQIGPITRSVEDAALLYDIIAGHDPKD 214 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |