CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ARCB4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Arcobacter butzleri (strain RM4018) GN=gatA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.249e-17 Identity = 60/171 (35.09%), Postives = 85/171 (49.71%), Query Frame = 1 Query: 328 GIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 GIPI +KDNI K+ T S L G + P +A V+ KL KAG G+ ++ E++ S++ S G+ NP P +A +LGT+T GSI P++ VG+KPT G SR G+ + D GPI + V DAA + D I+G+D D Sbjct: 49 GIPIAIKDNINVKN-WEITCSSNILKGYISPYNATVIEKLEKAGLSPFGRTNMDEFAMGSSTE-----SSCYGKTLNPIDNEKVPGGSSGGSAAAVAGGIAIAALGTDTGGSIRQPAAYCGCVGMKPTYGRVSRYGITAYSSSLDQCGPITQNVEDAAILYDIISGYDPMD 213
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_RICAE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rickettsia africae (strain ESF-5) GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17 Identity = 72/247 (29.15%), Postives = 114/247 (46.15%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ D K TS +L+ ++ +I + L V + AL QA+ AD A + R L GIP KD TK + TTA S L + ++ V + G ++LGK ++ E++ S+ S F G +P+ + D P +A+ +LG++T GS+ P+S +VG KPT G SR G+I D G R+V D++ +L+A+ GFD D Sbjct: 4 LNKLTVADSIKGLKNKDFTSTELIGAHIKQIEKHRNLNAYVTDTFDLALKQAEAADQNY---AQNNARTLEGIPFAAKDLFCTKG-IRTTACSNILKNFIPNYESSVTQNIFDKGGVMLGKTNMDEFA-MGSANITSCF----GNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDTGGSVRQPASFTGLVGFKPTYGRCSRYGMISFASSLDQAGIFTRSVLDSSIMLEAMMGFDEKD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_MYCPN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycoplasma pneumoniae GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17 Identity = 65/173 (37.57%), Postives = 86/173 (49.71%), Query Frame = 1 Query: 322 LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 L+ IP +LKDNIATK + TT GS L + P A V L +GA+++GKA+L E+ + SGF G +P+ + P + S+GT+T S+ P+S ++VG KPT GL SR GV P P D VG R V D A V D I D D Sbjct: 60 LNNIPFVLKDNIATKGIV-TTGGSRFLEDYIPPFSATVFELLNNSGALLVGKANLDEFG-LGGTGLHSGF----GFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPASICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVYDVALVSDEIIKHDKAD 226
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_METSB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17 Identity = 77/247 (31.17%), Postives = 118/247 (47.77%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSR-----QLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGF----SGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T+ DL LA ++ L ++ +LV+ L EI + L + E AL+ A+ +D A G L G+P+ +KD T+ + TTA S+ L G ++ V L + GA++LGK +L E++ SS S F S +G + ++ P L + T+T GSI P++ VG+KPT G SR G++ D GPI RTV DAA ++ ++AG D D Sbjct: 3 TLTDLTLAEARDALLNKDFSAVELVKAQLAEIEQARALNAFIKETPEKALAMAEASDARI---ARGEAGPLEGVPLGIKDLYCTEG-VETTAASHILEGFKPAYESTVSANLWRDGAVMLGKLNLDEFA-MGSSNETSYFGPVVSPWRRKGSDARIV---PGGSSGGSAAAVAARLCFGATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARTVRDAAILMRSMAGHDPKD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_HELP2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Helicobacter pylori (strain P12) GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17 Identity = 69/199 (34.67%), Postives = 97/199 (48.74%), Query Frame = 1 Query: 274 KADYERKVKA--------AGSLRGLH--GIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 K + + KV+A A SL G G+PIL+KDNI+ K T S L G V P A V+ L + G G +++ E++ +++ S G KNP + P LA +LG++T GSI P+S VGLKPT G SR G+I D +GPI + V DA+ + DAI+G D+ D Sbjct: 19 KNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKG-WEITCSSKILEGYVAPYHASVMENLHQNGMAGFGLSNMDEFAMGSTTE-----SSCYGITKNPRDKNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAYCSSFDQIGPITQNVEDASILFDAISGHDNKD 211
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CHLPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium phaeobacteroides (strain DSM 266) GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17 Identity = 73/239 (30.54%), Postives = 112/239 (46.86%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +DL+ + + T ++ + YL I R + + ALS+A D R+ G+ L G+P+ +KDNI+ K T A S L DA V+ +L A+ +GK ++ E++ SS S F G NP+ + P LA V+LG++T GS+ P+ +VGLKPT G SR G++ D +G + R DAA VL +AG D D Sbjct: 4 SSYQDLRSSLLAGQTTCEEVTKSYLERIDRHCDDNIFLAVFHEQALSRARSLD--RRFSEGGTPGLLFGMPMAIKDNISIKGARLTCA-SRILENYESVYDATVIERLLNEDAVFIGKTNMDEFA-MGSSNENSAF----GPVANPFDKTRVPGGSSGGSAAAVAAGLALVALGSDTGGSVRQPAGFCDIVGLKPTYGRISRYGLVAFASSFDQIGVLARNSDDAALVLGVMAGADERD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CHLL2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17 Identity = 71/239 (29.71%), Postives = 110/239 (46.03%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++ +DL+ ++T ++V YL I R + + A+ +A K D +K+ G L G+P+ +KDNI+ K T S L DA V +L A+ LGK ++ E++ SS S F G NP+ + P LA +LG++T GS+ P+ +VGLKPT G SR G++ D +G + R DA+ VL +AG D +D Sbjct: 4 SSYQDLRSELISRRITCEKVVLDYLERIDRHRDDNIYITVFHEQAVEKARKLD--KKLSEGGLPGKLFGMPMAIKDNISIKGA-GLTCASRILENYESVYDATAVQRLEAEDAVFLGKTNMDEFA-MGSSNENSAF----GAVPNPFDKTRVPGGSSGGSAAAVAAGLALAALGSDTGGSVRQPAGFCDIVGLKPTYGRISRYGLVAFASSFDQIGVLARNCDDASLVLGIMAGKDEHD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CAMJR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter jejuni (strain RM1221) GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17 Identity = 58/171 (33.92%), Postives = 86/171 (50.29%), Query Frame = 1 Query: 328 GIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 G+P+ +KDNI+ K T+ S L G + P DA V+V L+ G G+ ++ E++ SS A S + G+ NP P LA SLG++T GS+ P++ VG KP+ G SR G+ + D +G + + V DAA + DAIAG+D D Sbjct: 50 GVPVAIKDNISVKG-WELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMDEFA-MGSSTASSYY----GKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMD 214
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CAMJ8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17 Identity = 58/171 (33.92%), Postives = 86/171 (50.29%), Query Frame = 1 Query: 328 GIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 G+P+ +KDNI+ K T+ S L G + P DA V+V L+ G G+ ++ E++ SS A S + G+ NP P LA SLG++T GS+ P++ VG KP+ G SR G+ + D +G + + V DAA + DAIAG+D D Sbjct: 50 GVPVAIKDNISVKG-WELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMDEFA-MGSSTASSYY----GKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMD 214
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BRASO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bradyrhizobium sp. (strain ORS278) GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17 Identity = 81/243 (33.33%), Postives = 116/243 (47.74%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPR-DAGVVVKLRKAGAIILGKASLSEW----SNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T+ + + TS +L + +L I L V+E A + A AD R K G L GIP+ +KD ATKD + TTA S +LG+ VP ++ V +L + GA++LGK + E+ SN S P G R +G N ++ P L + T+T GSI P++ + VG+KPT G SR G++ D GPI RT DAA +L ++AG D D Sbjct: 8 TLAEARKGLADKTFTSLELTDAHLKAIEAARALNAFVMETPDQARAMARDAD-ARIGKGEGG--PLAGIPLGIKDLFATKD-VRTTACS-KILGNFVPTYESTVTAQLWRDGAVMLGKLNNDEFAMGSSNETSCFGPVGNPWRR-EGSNTTLV---PGGSSGGSASAVAALLCMGATATDTGGSIRQPAAFTATVGIKPTYGRCSRWGIVAFASSLDQAGPIARTTRDAAILLRSMAGHDPKD 241 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |