CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_STRTD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=gatA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.837e-17 Identity = 72/239 (30.13%), Postives = 114/239 (47.70%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDA-LSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI++L ++++ +L + + +I ++ + V +A L+QA+ D E+ + A L G IP +KDNI+T D + TTA S L DA V + I++GK ++ E++ SG + G KN + S P +SLG++T GSI P++ N +VGLKPT G SR G+I D +G +TV + A +L+ IA D D Sbjct: 7 TIEELHNLLVSKEISATELTQATIDDIKAREEAVNAFVTVAEEAALAQAEAID-EKGIDADNLLSG---IPFAVKDNIST-DGILTTAASKMLYNYEPIFDATAVANAKAKDMIVIGKTNMDEFA-----MGGSGETSYYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSQTVKENAQLLNVIASEDAKD 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_STRT2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=gatA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.837e-17 Identity = 70/238 (29.41%), Postives = 110/238 (46.22%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI++L ++++ +L + + +I ++ + V +A KA E+ + A L G IP +KDNI+T D + TTA S L DA V + I++GK ++ E++ SG + G KN + S P +SLG++T GSI P++ N +VGLKPT G SR G+I D +G +TV + A +L+ IA D D Sbjct: 7 TIEELHNLLVSKEISATELTQATIDDIKAREEAVNAFVTVAEEAALAQAKAIDEKGIDADNLLSG---IPFAVKDNIST-DGILTTAASKMLYNYEPIFDATAVANAKAKDMIVIGKTNMDEFA-----MGGSGETSYYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSQTVKENAQLLNVIASEDAKD 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_STRT1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus thermophilus (strain CNRZ 1066) GN=gatA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.837e-17 Identity = 70/238 (29.41%), Postives = 110/238 (46.22%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI++L ++++ +L + + +I ++ + V +A KA E+ + A L G IP +KDNI+T D + TTA S L DA V + I++GK ++ E++ SG + G KN + S P +SLG++T GSI P++ N +VGLKPT G SR G+I D +G +TV + A +L+ IA D D Sbjct: 7 TIEELHNLLVSKEISATELTQATIDDIKAREEAVNAFVTVAEEAALAQAKAIDEKGIDADNLLSG---IPFAVKDNIST-DGILTTAASKMLYNYEPIFDATAVANAKAKDMIVIGKTNMDEFA-----MGGSGETSYYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSQTVKENAQLLNVIASEDAKD 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_STRGC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=gatA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.837e-17 Identity = 78/239 (32.64%), Postives = 117/239 (48.95%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI++L + ++++ +L + L +I + I V+ + AL++A D K + + GIP+ +KDNI+TK + TTA S L DA V KL II+GK ++ E++ SS+ S F KN + S P +SLG++T GSI P+S N VVGLKPT G SR G+I D +GP +TV + A +L+ I+G D D Sbjct: 7 TIEELHDLLVKKEISAVELTQATLADIKEREGAVDSFITVSEEEALAKAAALD----AKGIDADNLMSGIPLAVKDNISTKGIL-TTAASKMLYNYKPIFDATSVEKLYGKDMIIVGKTNMDEFAMGGSSEN-SYFKTT----KNAWDGSKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKD 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_RHOP5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodopseudomonas palustris (strain BisA53) GN=gatA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.837e-17 Identity = 77/243 (31.69%), Postives = 110/243 (45.27%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSL-----GTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T+ + + + T+ QL + +L I L V+E A + A AD AAG L GL P+ +KD AT+ + TTA S L P ++ V +L + GA++LGK + E++ SS S F G NP+ + A L T+T GSI P++ VG+KPT G SR G++ D GPI RTV DAA +L ++AG D D Sbjct: 8 TLAEARDGLAKKSFTALQLTDAHLAAIEAARVLNAYVLETPEQARAMAKAADERIARGAAGPLEGL---PLGIKDLFATQG-VRTTACSKILGEFSPPYESTVSAQLWRDGAVLLGKLNNDEFA-MGSSNETSCF----GPVVNPWRREGSDAKLVPGGSSGGSASAVAAGLCLGATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPIARTVRDAAILLRSMAGHDPKD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_JANSC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Jannaschia sp. (strain CCS1) GN=gatA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.837e-17 Identity = 76/243 (31.28%), Postives = 116/243 (47.74%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVL-----SADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI D + A ++ ++TS L + L I + + L V + AL +A AD A G + GIP+ +KD T+ + + A S L G ++ V KLR AGA++LGK ++ E++ SS S + G NP+ + P +L + GT+T GSI P++ +VGLKPT G SR G++ D GP+ +TV DAA + A+ G+D D Sbjct: 8 TIADARDALRKGEVTSVDLTQACLSAIDQADALGTFVHKTPDLALERAKAADARI---AEGDAPDMCGIPVGIKDLFCTEG-VPSQAASRILDGFKPEYESTVSGKLRDAGAVMLGKLNMDEFA-MGSSNETSVY----GNAVNPWRAGNSDAALTPGGSSGGSASAVAGDLCLAATGTDTGGSIRQPAAFTGIVGLKPTYGRCSRWGIVAFASSLDQAGPMTKTVRDAAIMGRAMMGYDAKD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BART1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=gatA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.837e-17 Identity = 77/243 (31.69%), Postives = 108/243 (44.44%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGL-HGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEW----SNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI + A KL + +L E YL I NP L+ + + + QA K E + A RGL GIP+ +KD AT ++T A S L G ++ + L + GA++LGK ++ E+ SN S P R V P + A + T+T GSI P++ VG+KPT G SR GV+ D GPI R V D A +L ++A FD D Sbjct: 8 TIAQARDALITKKLKATELTEAYLKAIELANPTLNAYVTITAE---QARKMAAESDRRLAKGERGLLEGIPLGIKDLFATHG-VHTQACSNILDGFKPNYESTITANLWQDGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRKKDSNEKLV----PGGSSGGSAAAVAAQICAGATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGVVAFASSLDQAGPIARDVRDCAILLRSMASFDEKD 242
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ROSDO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=gatA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.011e-17 Identity = 76/250 (30.40%), Postives = 119/250 (47.60%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHR---LNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + E + + + A + + TS+ L E L I LN +H ++ AL +A AD A G+ + G+PI +KD TK + + AGS L G + ++ V L AGA++LGK ++ E++ SS S + G NP+ D P +L + GT+T GSI P++ VG+KPT G SR G++ D GP+ ++V DAA +L+A++G D D Sbjct: 4 LNELGLAEARDALRAGETTSKDLTEACLTAIEEAGVLNAFVHHTADL---ALERAAAADARL---AQGAAPAMCGLPIGMKDLFCTKG-VASQAGSRILEGFLPEYESTVSQNLVDAGAVMLGKLNMDEFA-MGSSNETSIY----GDVINPWRRKDDEKPLTPGGSSGGSAAAVAADLCLAATGTDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAGPMTKSVRDAAIMLEAMSGHDPKD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_OLICO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=gatA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.011e-17 Identity = 74/243 (30.45%), Postives = 110/243 (45.27%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T+ D + T+ +L + +L + L V+E A + A +AD A G L GIP+ +KD AT+D + TA S L P ++ + +L + GA++LGK + E++ SS S F G NP+ P L + GT+T GSI P++ +VG+KPT G SR GV+ D GP RTV D+A +L ++AG D D Sbjct: 8 TLADAKEGLAAKSFTALELTDAHLAAMESARVLNAYVLETPDKARAMAKEADTRI---AKGERSNLLGIPLGIKDLFATRD-VRLTACSKILDDFKPPYESTITSQLWRDGAVLLGKLNNDEFA-MGSSNETSAF----GNVINPWRREGSDTALVPGGSSGGSAAAVAAGLCLGATGTDTGGSIRQPAAFTGIVGIKPTYGRCSRWGVVAFASSLDQAGPFARTVRDSAILLRSMAGHDPKD 241
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_HELPH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Helicobacter pylori (strain HPAG1) GN=gatA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.544e-17 Identity = 68/199 (34.17%), Postives = 96/199 (48.24%), Query Frame = 1 Query: 274 KADYERKVKA--------AGSLRGLH--GIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 K + + KV+A A SL G G+PIL+KDNI+ K T S L G V P A V+ L + G +++ E++ +++ S G KNP + P LA +LG++T GSI P+S VGLKPT G SR G+I D +GPI + V DA+ + DAI+G D+ D Sbjct: 19 KNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKG-WEVTCSSKILEGYVAPYHASVIENLHQNSMAGFGLSNMDEFAMGSTTE-----SSCYGITKNPRDKNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAYCSSFDQIGPITQNVEDASILFDAISGHDNKD 211 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |