CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSEA7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas aeruginosa (strain PA7) GN=gatA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.651e-26 Identity = 84/243 (34.57%), Postives = 120/243 (49.38%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ A + ++ +L LG I +L+P L+ I V D A++QA AD R A G L G PI KD T+ + T+ GS L V P DA VV KL AG + LGK ++ E++ S++ S G KNP+ L P L + GT+T GSI P++ ++ G+KPT G SR G+I D GP+ RT D A +L A+AGFD D Sbjct: 2 LHQLTLAEIARALADKRFSAEELTRTLLGRIRQLDPQLNSFISVTDDLAIAQAKAADERR---ANGENGALLGAPIAHKDLFCTQG-VRTSCGSKMLDNFVSPYDATVVEKLAAAGTVTLGKLNMDEFAMGSSNQ-----SSHYGAVKNPWSLDRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALMLGAMAGFDPKD 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_METCA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylococcus capsulatus GN=gatA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.651e-26 Identity = 87/239 (36.40%), Postives = 121/239 (50.63%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T+ +L ++ + +S +L + +L I RL+P L+ I P+ AL+QA AD ER K G L GIPI KD TK + T+ GS L V P DA VV + AGA++LGK ++ E++ SS S + G KNP+ + P L + GT+T GSI P++ + GLKPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 5 TLAELAAGLERREFSSVELTQAHLARIERLDPALNSFITTTPEIALAQARAAD-ERLAK--GEAGPLTGIPIAQKDIFCTKG-VRTSCGSRMLDSFVSPYDACVVERFNAAGAVMLGKLNMDEFA-MGSSNETSYY----GPVKNPWNTATVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAAFCGITGLKPTYGRVSRWGMIAFASSLDQAGPMARTAEDCAIMLQIMAGFDERD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CYAP4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=gatA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.651e-26 Identity = 80/240 (33.33%), Postives = 127/240 (52.92%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A+I++L + +++++ + L +I +L P +H + + + AL+QA++ D +++ + L GIPI +KDN+ TK + TT GS L G + P ++ V +L AGA+++GK +L E++ SS S + NP+ L P ++LG++T GSI P+S VVGLKPT GL SR G++ D +GP V DAA +L AIAG D D Sbjct: 2 ASIRELHQQLVSKERSAKEITQDALEKIQQLEPKVHAFLTLTAEQALAQAERVD--QQIATGTEIGLLAGIPIAIKDNLCTKG-IPTTCGSKILQGFIPPYESTVTSRLAAAGAVMVGKTNLDEFA-MGSSTENSAYQLTA----NPWDLQRVPGGSSGGSAAAVAAGETLIALGSDTGGSIRQPASFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFATNVEDAALLLGAIAGHDPQD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_SYNY3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechocystis sp. (strain PCC 6803) GN=gatA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.462e-26 Identity = 83/238 (34.87%), Postives = 126/238 (52.94%), Query Frame = 1 Query: 130 IKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVN-PDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 I+ L ++++ + + L I ++ L ++V P A++QA+K D + + A + L GIPI +KDN+ TK + TT S L G V P ++ V KL+KAGA+++GK +L E++ SS SG+ NP+ L+ P + ++LG++T GSI P+S VVG+KPT GL SR G++ D +GP R V DAA +L AIAG D D Sbjct: 4 IRALHQQLIDQEISAVAVAQASLARIEAVDDRLKSFLQVTAPQAIAQAEKVDAQ--IAAGEPIGLLAGIPIGIKDNLCTKGIV-TTCASQILRGFVPPYESTVTEKLQKAGAVMVGKTNLDEFA-MGSSTENSGYQVTA----NPWDLTRVPGGSSGGSAAAVAADECLIALGSDTGGSIRQPASLCGVVGMKPTYGLVSRFGLVAYASSLDQIGPFARRVEDAAILLQAIAGHDSRD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_HAHCH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Hahella chejuensis (strain KCTC 2396) GN=gatA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.462e-26 Identity = 85/239 (35.56%), Postives = 120/239 (50.21%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI ++ + + +SR++ + YL I RLNP L+ I V D ALSQA++AD AG L+G+P+ KD T+ + TT GS L V P ++ V K AGA+ LGK ++ E++ SS S F G +NP+ P L A + GT+T GSI P++ + GLKPT G SR G++ D GP RT DAA +L+ +AG D D Sbjct: 5 TISEIISGLRDKQFSSREITQDYLARIKRLNPELNCFITVTEDLALSQAEQADARLN---AGQTSVLNGVPLAHKDVFCTEG-VTTTCGSRMLEKFVPPYESTVTRKFIDAGAVTLGKTNMDEFA-MGSSNENSYF----GPVRNPWDTERAPGGSSGGSAAAVAAGLCAAATGTDTGGSIRQPAAFCGLTGLKPTYGRVSRLGMVAFASSLDQGGPFARTAEDAALLLNVMAGHDPMD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_GRABC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=gatA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.462e-26 Identity = 85/248 (34.27%), Postives = 128/248 (51.61%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + TI + + + + ++R+L + +LG I LNP L+ I V PD A +QA AD +V A+G L GIP+ KD ++ + TTAGS L V P ++ V ++ + GA+ILGKA+L E++ S+ S + G +NP+ D P +LA + GT+T GSI P+S + G+KPT G SR G++ D GP RTV D A +L ++AG D D Sbjct: 4 LTDLTIAEARDGLRAKRFSARELTDAHLGAIEALNPRLNAYITVTPDQARAQAAAAD---RVLASGEAGALTGIPVASKDMFCSEG-IRTTAGSRILENFVPPYESAVTERMLRDGAVILGKANLDEFA-MGSANLTSAY----GPVENPWKRHDDDAVLVPGGSSGGSAAAVAAHLALGATGTDTGGSIRQPASYCGIAGIKPTYGRCSRWGIVAYASSLDQAGPFARTVRDNAILLRSMAGHDPRD 242
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSEAE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas aeruginosa GN=gatA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.522e-26 Identity = 83/243 (34.16%), Postives = 120/243 (49.38%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ A + ++ +L LG I +L+P L+ I + D A++QA AD R A G L G PI KD T+ + T+ GS L V P DA VV KL AGA+ LGK ++ E++ S++ S G KNP+ L P L + GT+T GSI P++ ++ G+KPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 2 LHQLTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERR---ANGENGALLGAPIAHKDLFCTQG-VRTSCGSKMLDNFVSPYDATVVEKLTAAGAVTLGKLNMDEFAMGSSNQ-----SSHYGAVKNPWSLDRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALMLGVMAGFDPKD 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_MAGSM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Magnetococcus sp. (strain MC-1) GN=gatA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.522e-26 Identity = 84/243 (34.57%), Postives = 123/243 (50.62%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + E T+++ +++S +L + L +I + NP ++ + V+ + AL+ A AD AAG+ L GIPI KD T D M TT S L + P DA + LR+AGA+ILGK +L E++ SS S F G +NP+ P N+A + GT+T GSI P+S ++ GLKPT G SR G+I D GP+ RT DAA +L+ + +D D Sbjct: 3 LNELTLREAADKLATKEISSVELTQACLDQIAKHNPTINAFVTVDAEKALAAAQAADARI---AAGNGAPLTGIPIAHKDIFNTTD-MRTTCSSRMLENFIPPFDATITTHLRQAGAVILGKTNLDEFA-MGSSTETSYF----GASRNPWDTQRTPGGSSGGSSAAIAANMAICATGTDTGGSIRQPASLTNLTGLKPTYGRCSRYGIIAFASSLDQAGPMTRTAEDAAMLLNVMVSYDPKD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ROSS1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Roseiflexus sp. (strain RS-1) GN=gatA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.905e-26 Identity = 82/243 (33.74%), Postives = 124/243 (51.03%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ D + A + ++TS +L + L I + P + + ++ + A +QA AD R AAG L GIP+ +KD I+T+ + TT S L V DA V +L+ AGA+++GK + E++ SS S F Q +NP+ L P A +LGT+T GSI P++ + GLKPT G SR G++ D +GP+ RTV D A +L IAG D +D Sbjct: 4 LHQLTLSDAREALMRGEITSVELTDALLARIAAVEPQVRAFLTIDAEGARAQAQAADARR---AAGDTSPLLGIPLGIKDVISTQG-VRTTCASKMLENYVPVYDATAVARLKAAGAVLIGKLNCDEFA-MGSSTENSAFQ----QTRNPWNLERVPGGSSGGSAAAVAAGEAPATLGTDTGGSIRQPAALCGITGLKPTYGRVSRYGLVAFASSLDQIGPMARTVRDCAIILRVIAGADPFD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CHRVO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chromobacterium violaceum GN=gatA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.905e-26 Identity = 84/241 (34.85%), Postives = 124/241 (51.45%), Query Frame = 1 Query: 121 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 +AT+K L +++S +L YL I LNP L+ ++ V+ + L++A AD AAG R L G+P++ KD + + T+ GS L V P A VV + AG + LG+A++ E++ SS S + G KNP+ L+A P LA V+ T+T GSI P+S V G+KPT G+ SR G++ D GPI +T D A +L+ +AGFD D Sbjct: 3 QATLKQLSQQLAAKQVSSVELASQYLDRIEALNPQLNAIVTVDREKTLAEARAADARL---AAGDARALTGVPLVHKD-LFCQQGWKTSCGSRMLDNFVSPYSAHVVEQCAAAGMVTLGRANMDEFA-MGSSNENSFY----GAVKNPWDLNAIPGGSSGGSAAAVAARLAPVATATDTGGSIRQPASHCGVTGIKPTYGVVSRYGMVAYASSLDQGGPIAQTAEDCALMLNVMAGFDARD 234 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |