CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ALKMQ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alkaliphilus metalliredigens (strain QYMF) GN=gatA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.905e-26 Identity = 82/243 (33.74%), Postives = 124/243 (51.03%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEV-NPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 I E TI D++ + Q + T + +V+ Y+ I L+ ++ I + AL +A A + K+ + L GIP+ +KDN+ T+ + T+ S L + P DA +V KLR AGAII+GK ++ E++ SS S F KNP+ L+ P A +++G++T GSI P++ VGLKPT GL SR G+I D +GP +TV D A L + G D D Sbjct: 3 IEEMTIMDIRKGYVQKQFTVKDVVQGYIDRIKELDGKINAFITLCEESALMEA--AVLDEKLSRGEEIGLLGGIPVAIKDNMCTQG-IKTSCASEMLADFIPPYDATIVKKLRAAGAIIIGKTNMDEFA-MGSSTENSAFKVT----KNPWDLTKVPGGSSGGSAAALAAGFAPLTIGSDTGGSIRQPAAFCGTVGLKPTYGLVSRFGLIAFASSLDQIGPFTKTVKDCALSLQVMQGNDPLD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_TRIEI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Trichodesmium erythraeum (strain IMS101) GN=gatA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.713e-26 Identity = 86/240 (35.83%), Postives = 126/240 (52.50%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A+I D+ + ++ ++ + L I++L P L I V + A++QA + D K+ A + L GIPI +KDNI T+ + TT GS L + P ++ V KL AGAIILGK +L E+ SS S + NP+ + P + V+LG++T GSI P+S VVG+KPT GL SR G++ D +GP+ RTV D+A +L AIAG+D D Sbjct: 2 ASISDIHQQLISKQRSAVEITQEALENINQLEPKLKSFICVTAEKAIAQARQVD--AKIAAGEKIGLLTGIPIAVKDNICTRG-IPTTCGSKILQNFIPPYESTVTQKLVDAGAIILGKTNLDEFG-MGSSTENSAYQVT----TNPWDNTRVPGGSSGGSAAAVASAESVVALGSDTGGSIRQPASFCGVVGIKPTYGLVSRYGLVAYASSMDQIGPLSRTVKDSAILLQAIAGYDPKD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_COREF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium efficiens GN=gatA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.713e-26 Identity = 85/241 (35.27%), Postives = 123/241 (51.04%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDA-LSQADKADYERKVKAAGSL--RGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T +L ++TSR++ + +L I+ ++ +H + V +A L+ AD D K AG L G+P+ LKD + T D TTA S L G + P DA V KLR+AG ILGK ++ E++ SS S + G +NP+ L P A +++GT+T GSI P++ + VG+KPT G SR G+I D VGP RTV D A + + IAG D +D Sbjct: 18 TAAELAGLIHSREVTSREVTQAHLDRINEVDGEIHAFLHVGEEAALAAADAVD---KALDAGEAPASALAGVPLALKDALVTTDAP-TTAASKILEGYMSPYDATVTRKLREAGIPILGKTNMDEFA-MGSSTENSAY----GATRNPWDLERTPGGSGGGSSAALASGEAPLAIGTDTGGSIRQPAALTNTVGVKPTYGTVSRYGLIACASSLDQVGPTARTVLDTALLHEVIAGHDMFD 249
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_NITOC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=gatA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.007e-25 Identity = 84/244 (34.43%), Postives = 122/244 (50.00%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRA 855 ++ +L A K + +S +L + YL I RLN L+ I V+ + AL QA AD + +G + GIP+ KD T + T+ GS L P +A VV +L+ AGA++LGK ++ E++ SS S + G KNP+ P L + GT+T GSI P++ + GLKPT G SR G+I D GP+ RT DAA +L+ +AGFD D + A Sbjct: 5 SLAELASALKAREFSSEELTQHYLKRIERLNEDLNSFITVSTEEALKQAKAAD---AILQSGEGSSITGIPLAHKDIFCTTG-VKTSCGSKMLDNFTAPYNATVVSRLKTAGAVMLGKTNMDEFA-MGSSNETSFY----GSVKNPWAHDRVPGGSSGGSAAAVAARLTPAATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQGGPMARTAQDAALLLNVMAGFDERDSTSVA 239
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ALCBS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gatA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.007e-25 Identity = 83/241 (34.44%), Postives = 124/241 (51.45%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKV-KAAGSLRGL-HGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 T+ +L+ +SR+L E +L I + + L+ + V + AL+QAD AD +A+ S+ GL G+PI KD T+ + T+ GS L + P A VV K+ GA++LGK ++ E++ SS S + G KNP+ L P LA + GT+T GSI P++ N++ GLKPT G SR G+I D GP+ ++ D A +L A+AG DH D Sbjct: 5 TLTELKAGLAAGDFSSRELTEHFLARIKQYDGELNSFVTVTEEQALAQADAADATLATNRASSSVSGLLTGLPIAHKDIFCTEG-VRTSCGSKMLDNFIAPYTATVVEKMAAEGAVMLGKTNMDEFA-MGSSNETSYY----GPVKNPWDLERVPGGSSGGAAACLGARLAPAATGTDTGGSIRQPAALNNITGLKPTYGRVSRWGMIAFASSLDQAGPMAQSAEDCALMLQAMAGHDHRD 239
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_THEEB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermosynechococcus elongatus (strain BP-1) GN=gatA PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.316e-25 Identity = 83/250 (33.20%), Postives = 132/250 (52.80%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPS-GFSGR---------GGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + I++L + + ++ ++ + YL I ++ P LH + V D AL+QA A+ ++++ A + L GIP+ +KDN+ T + TT S L V P ++ V KL+ AGAI++GK +L E++ S++ + GF+ G G + ++A C A +LG++T GSI P++ VVGLKPT GL SR G++ D +GP+ TV DAA +L AIAG D D Sbjct: 2 SVIQELHRQLVRKERSATEITQAYLDRIAQVEPTLHSFLTVTRDRALAQA--AEVDKRLAAGEEIGLLTGIPLAIKDNLCTYG-VRTTCASKMLEHFVPPYESTVTEKLQAAGAIMVGKTNLDEFAMGSSTENSAFGFTANPWNPERVSGGSSGGSAAAVAAREC---------------AAALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPLAPTVTDAAILLGAIAGHDPKD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_SULSY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=gatA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.316e-25 Identity = 79/244 (32.38%), Postives = 126/244 (51.64%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRA 855 ++K+L K ++ ++VE ++ +++ P + + D AL +A K D E + ++ L G+PI +KDNI+TKD + TT S L V DA V+ +L+ G +I GK +L E++ S++ + F R NP+ L P +A SLG++T GSI P++ VVGLKPT G SR G++ D +GP RTV D A +++ I+G D D +R+ Sbjct: 7 SLKELSDLVKSKEVKPSEIVEAFIERKNQVEPKIKAYVTALDDLALEKAKKRDQE--LTKLENIPDLFGLPIAIKDNISTKD-IKTTCSSKMLENFVPVYDATVIERLKSQGYVITGKTNLDEFAMGSSTENSAFFPTR-----NPWDLERVPGGSSGGSAAVVASGMAPASLGSDTGGSIRQPAAFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPFGRTVEDVAMIMNVISGKDPKDSTSRS 242
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURXL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia xenovorans (strain LB400) GN=gatA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.316e-25 Identity = 87/243 (35.80%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + E ++ +L+ A + ++ +L + YL I N L + I+V+PD L+QA AD AG L GL PI KD TK +TAGS L P DA VV +L+ AG + +GK ++ E++ SS S F G +NP+ + A P LA + GT+T GSI P+S + + G+KPT G SR G+I D GP+ R+ AD A +L+A+AGFD D Sbjct: 1 MHEKSLTELRAALTARECSAVELAQLYLKRIEAANSL-NAFIQVDPDLTLAQAKAADALLHTGHAGPLVGL---PIAHKDVFVTKG-WRSTAGSKMLSNYESPFDATVVARLQNAGMVCVGKTNMDEFA-MGSSNENSYF----GPVQNPWDVKAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCATLLNAMAGFDGRD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_THICR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thiomicrospira crunogena (strain XCL-2) GN=gatA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.718e-25 Identity = 83/239 (34.73%), Postives = 122/239 (51.05%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++K++ + ++TS L + YL I + + L+ + V P+ A+ A +AD E + G L L GIP+ KD T D + TT GS L + P DA VV R G ILGK ++ E++ SS+ S G KNP+ L A P LA ++ G++T GSI P+S + G+KPT G SR G+I D GP+ R+ ++A++LD IAGFD D Sbjct: 5 SVKEMSEKLRNKEITSVALTQHYLDRIDQYDGELNAYVTVTPELAMEMARQAD-EMIAEGKGGL--LTGIPVAHKDIFCTLD-VKTTCGSKMLDNFIAPYDAKVVEASRALGMPILGKTNMDEFAMGSSSE-----SSYYGATKNPWDLKAVPGGSSGGSAAVIAAGLAPLATGSDTGGSIRQPASFCGITGIKPTYGAVSRYGMIAYASSFDQGGPMTRSAEESAWLLDVIAGFDERD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSESM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas syringae pv. tomato GN=gatA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.718e-25 Identity = 81/243 (33.33%), Postives = 118/243 (48.56%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ + K +S +L L I +L+P L+ I + D A++QA AD R AAG L G P+ KD T+ + T+ GS L P DA VV KL AG + LGK ++ E++ +++ S G KNP+ L P L + GT+T GSI P++ ++ GLKPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 1 MHQMTLAEIARGLAEKKFSSEELTRVLLSRIAQLDPQLNSFISLTEDLAITQAQAADARR---AAGENGPLLGAPLAHKDLFCTQG-IRTSCGSRMLDNFKAPYDATVVSKLASAGTVTLGKTNMDEFAMGSANE-----SSHYGAVKNPWNLECVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQD 234 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |