CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSEAB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=gatA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.718e-25 Identity = 82/243 (33.74%), Postives = 119/243 (48.97%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ A + ++ +L LG I +L+P L+ I + D A++QA AD R A G L G PI KD T+ + T+ GS L V P DA VV KL AGA+ LGK ++ E++ S++ S G NP+ L P L + GT+T GSI P++ ++ G+KPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 2 LHQLTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERR---ANGENGALLGAPIAHKDLFCTQG-VRTSCGSKMLDNFVSPYDATVVEKLAAAGAVTLGKLNMDEFAMGSSNQ-----SSHYGAVNNPWSLDRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALMLGVMAGFDPKD 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSEA8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas aeruginosa (strain LESB58) GN=gatA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.718e-25 Identity = 82/243 (33.74%), Postives = 119/243 (48.97%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ A + ++ +L LG I +L+P L+ I + D A++QA AD R A G L G PI KD T+ + T+ GS L V P DA VV KL AGA+ LGK ++ E++ S++ S G NP+ L P L + GT+T GSI P++ ++ G+KPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 2 LHQLTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERR---ANGENGALLGAPIAHKDLFCTQG-VRTSCGSKMLDNFVSPYDATVVEKLAAAGAVTLGKLNMDEFAMGSSNQ-----SSHYGAVNNPWSLDRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALMLGVMAGFDPKD 235
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_NITEU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosomonas europaea GN=gatA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.718e-25 Identity = 84/248 (33.87%), Postives = 126/248 (50.81%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASE 864 A+++ L L + K++S +L +L I LNP L+ I ++ + +L QA+ AD K+ AAG L GIPI KD + + TT GS L V P DA VV + +AG + LGK ++ E++ SS S + G KNP+ A P LA + G++T GSI P++ + G+KPT GL SR G+I D GP+ ++ D A +L+ + GFD D + +E Sbjct: 4 ASLRQLSLLLSEKKISSTELTSEFLSRIKALNPDLNAFITIDEEKSLDQANVAD---KMIAAGRSTPLTGIPIAQKDIFCARGWL-TTCGSKMLSNFVSPYDATVVERFDQAGMVNLGKTNMDEFA-MGSSNETSYY----GPVKNPWDRLAVPGGSSGGSACAVAARLAPAATGSDTGGSIRQPAALCGISGIKPTYGLVSRYGMIAFASSLDQGGPMAKSAEDLALLLNTMVGFDERDSTSLQRAE 242
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA1_CLOAB (Glutamyl-tRNA(Gln) amidotransferase subunit A 1 OS=Clostridium acetobutylicum GN=gatA1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.718e-25 Identity = 82/248 (33.06%), Postives = 127/248 (51.21%), Query Frame = 1 Query: 109 FPIREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEV-NPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPAT 849 + ++ +KD+ + ++ ++ +L I ++ ++ ++ V +A++ A + D +K+++ SL GL G+P+ +KDNI+ K+ NT A S L G V P DA V+ L+K +I+GKA++ E++ SS S F KNP+ L P A +SLGTET GS+ P+S +VGLKPT G SR GV+ D VG R V D A + IAG D D T Sbjct: 4 YKLKAHELKDM---ISKKEVKVEEVTNSFLNRIEEVDEKVNALLYVAKEEAVNTAKELD--KKIESGESLSGLSGVPVAIKDNISVKNMQNTCA-SKILEGYVSPYDATVIENLKKNNGVIIGKANMDEFA-MGSSTENSAFK----VSKNPWSLERVPGGSSGGSAVAVASLEAPISLGTETGGSVRQPASFCGLVGLKPTYGRISRYGVVAFGSTLDQVGMFARDVEDCALLTQNIAGLDKMDFTT 240
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_AZOSE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azoarcus sp. (strain EbN1) GN=gatA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.244e-25 Identity = 84/239 (35.15%), Postives = 120/239 (50.21%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A++ +L+ A K++S +L +L I RL+ L+ I V+ D +A +A R AAG L GIP+ KD T+ + TT GS L V P DA VV L+ AGA+ LGK ++ E++ SS S F G KNP+ + P L ++ GT+T GS+ P++ V G+KPT G+ SR G+I D G + AD A +L A+AGFD D Sbjct: 4 ASLTELRAALDARKISSVELATLFLDRIERLDASLNAFITVDRDGALEAARAADARI--AAGDAGPLTGIPLAHKDVFCTEGVL-TTCGSKMLANFVSPYDAHVVSLLKTAGAVSLGKTNMDEFA-MGSSNENSHF----GPAKNPWDTTRIPGGSSGGSAAAVAARLVPIATGTDTGGSVRQPAALTGVTGIKPTYGVVSRYGMIAYASSLDQGGAFGASAADCAQLLTAMAGFDPRD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ACIAD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter sp. (strain ADP1) GN=gatA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.244e-25 Identity = 81/243 (33.33%), Postives = 123/243 (50.62%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + ++++L Q + +SR+L + YL I +++ + + V + AL+QAD AD R+ AG L G +P+ KD TK + TTAGS L + P +A VV K AG + LGK ++ E++ +S+ S G NP+ L P +LA + GT+T GSI P+S + GLKPT G SR G+I D GP+ R+ D AY+++ +AG D D Sbjct: 4 LHRLSVRELAEGLGQAQFSSRELTQHYLNRIDKIDAQVKSYVTVTHEQALAQADAADALRQAGNAGFLTG---VPLAHKDIFCTKG-IKTTAGSKMLDNFISPYNATVVEKANAAGLVTLGKLNMDEFAMGSTSE-----SSYFGATCNPWALDRVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGMIAYASSLDQGGPMARSAEDCAYLMNVMAGHDAKD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSE14 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=gatA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.931e-25 Identity = 81/243 (33.33%), Postives = 117/243 (48.15%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ + K +S +L L I L+P L+ I + D A++QA AD R AAG L G P+ KD T+ + T+ GS L P DA VV KL AG + LGK ++ E++ +++ S G KNP+ L P L + GT+T GSI P++ ++ GLKPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 1 MHQMTLAEIARGLAEKKFSSEELTRVLLSRIATLDPQLNSFISLTEDLAITQAQAADARR---AAGENGPLLGAPLAHKDLFCTQG-IRTSCGSRMLDNFKAPYDATVVSKLASAGTVTLGKTNMDEFAMGSANE-----SSHYGAVKNPWNLQCVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_METMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina mazei GN=gatA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.931e-25 Identity = 83/233 (35.62%), Postives = 118/233 (50.64%), Query Frame = 1 Query: 142 QLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 Q+ K + ++ ++ YL I + ++G + ++ AL QA K D E G L G+PI +KDNI+ N+ GS L G V P +A V+ KL AGA+ILGK ++ E++ SS S F G NP+ L P A +LG++T GS+ CP+S VVGLKPT G SR GV+ + VGP+ V D A ++D IAG+D D Sbjct: 10 QVKEKIKESSAEEVTSRYLEVIKKSK--INGYLTISDKALEQAKKIDKE------GHEGPLAGVPIAIKDNISVVGLPNS-CGSKILEGYVPPFNAHVIEKLLSAGAVILGKTNMDEFA-MGSSTETSHF----GPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPASFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAVLMDVIAGYDRRD 228
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_BURPP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=gatA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.931e-25 Identity = 86/243 (35.39%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + E ++ +L+ A + ++ +L + YL I N L + I+V+PD L+QA AD AG L GL PI KD TK +TAGS L P DA VV +L+ AG + +GK ++ E++ SS S F G +NP+ + A P LA + GT+T GSI P+S + + G+KPT G SR G+I D GP+ ++ AD A +L+A+AGFD D Sbjct: 1 MHEKSLTELRAALTAKECSAVELAQLYLKRIDAANSL-NAFIQVDPDLTLAQAKAADALLHTGHAGPLVGL---PIAHKDVFVTKG-WRSTAGSKMLSNYESPFDATVVARLQNAGMVCVGKTNMDEFA-MGSSNENSYF----GPVQNPWDVKAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMAQSAADCATLLNAMAGFDERD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_SYNE7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus elongatus (strain PCC 7942) GN=gatA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.828e-25 Identity = 82/240 (34.17%), Postives = 125/240 (52.08%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A+I++L + + ++ ++ E L I L P L + V D A++QA D +++ A + L GIPI +KDN+ T+ + TT S L G V P ++ V +L +AGA+ +GK +L E++ SS S + NP+ L+ P + V+LG++T GSI P++ VVGLKPT GL SR G++ D +GP R+V D A +L AIAG D D Sbjct: 2 ASIRELHSQLVRKERSAVEIAEAALQRIETLEPQLKSFLHVTADQAIAQAKAVD--QRIAAGEEISLLAGIPIGIKDNLCTRG-IPTTCASKILQGFVPPYESTVTQRLAEAGAVAVGKTNLDEFA-MGSSTENSAYQTTA----NPWDLTRVPGGSSGGSAAAVAADECVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFSRSVEDTAILLGAIAGHDPKD 233 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |