CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_RALSO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ralstonia solanacearum GN=gatA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.828e-25 Identity = 88/240 (36.67%), Postives = 120/240 (50.00%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDA-LSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 +T+K L ++++ +L YL I L + I V+P+A L+QA AD AAG L GIPI KD T+ TAGS L V P DA VV +L AG + LGK ++ E++ SS S F G KNP+ ++ P +LA + GT+T GSI P+S + + G+KPT G SR G+I D GP+ RT D A +L A+AGFD D Sbjct: 4 STLKTLSAQLAAKEVSAVELARHYLARIEARADL-NAFIHVDPEATLAQAQAADARL---AAGDAGPLAGIPIAHKDVFVTRG-WRATAGSKMLDSYVSPFDATVVERLAAAGMVTLGKTNMDEFA-MGSSNENSHF----GPVKNPWDVARVPGGSSGGSAAAVAADLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMARTAEDCALLLSAMAGFDARD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_NOSP7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=gatA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.828e-25 Identity = 84/240 (35.00%), Postives = 122/240 (50.83%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A+I++L + + ++ ++ + L I L P LH + V + AL QA D K+ A + L GIP+ +KDN+ TK + TT S L V P ++ KL AGA+++GK +L E++ SS S + NP+ LS P V+LG++T GSI P+S VVG+KPT GL SR G++ D +GP TV DAA +L+AIAG D D Sbjct: 2 ASIRELHQQLVKKERSAVEITQEALERIEALEPKLHSFLCVTAERALEQAGAVD--AKIAAGEEIGLLAGIPVGIKDNLCTKG-IPTTCASRILENFVPPYESTATQKLADAGAVMVGKTNLDEFA-MGSSTENSAYQVTA----NPWNLSRVPGGSSGGSAAAVSSQECVVALGSDTGGSIRQPASFCGVVGMKPTYGLVSRYGLVAYASSLDQIGPFANTVEDAAILLNAIAGHDPKD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_ANAVT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gatA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.828e-25 Identity = 84/240 (35.00%), Postives = 122/240 (50.83%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A+I++L + + ++ ++ + L I L P LH + + AL QA D K+ A + L GIPI +KDN+ TK + TT S L V P ++ V KL AGA+++GK +L E++ SS S + NP+ LS P V+LG++T GSI P+S VVGLKPT GL SR G++ D +GP ++V D A +L AIAG+D D Sbjct: 2 ASIRELHEQLVKKERSAVEITQETLDHIQELEPKLHSFLHITAQQALEQARAVD--AKIAAGEEIGLLAGIPIGVKDNMCTKG-IPTTCASRILENFVPPYESTVTQKLLDAGAVVVGKTNLDEFA-MGSSTENSAYQVTA----NPWDLSRVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQPASFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFGKSVEDTAILLKAIAGYDPKD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_THIDA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thiobacillus denitrificans (strain ATCC 25259) GN=gatA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25 Identity = 86/234 (36.75%), Postives = 118/234 (50.43%), Query Frame = 1 Query: 142 QLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 QLA KQ ++SR+L + YL I LNP ++ I V+P+ L++A AD + A G+ L G+PI KD T D TT GS L V P DA V+ + + AG LGK ++ E++ SS S F G KNP+ P +A + GT+T GSI P++ + GLKPT GL SR G+I D GP+ + D A +L+ I GFD D Sbjct: 12 QLAAKQ--VSSRELAQQYLDRIAALNPTINAFITVDPEKTLAEAAAAD---ALIAGGAAGPLTGVPIAHKDIFCT-DGWLTTCGSKMLANFVAPYDAHVIERCKAAGMPSLGKTNMDEFA-MGSSNETSFF----GAVKNPWNAGYVPGGSSGGAAACVAARMAPAATGTDTGGSIRQPAALCGITGLKPTYGLVSRYGMIAFASSLDQAGPMAPSAEDCARLLNVITGFDPKD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_SYNS3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain CC9311) GN=gatA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25 Identity = 82/239 (34.31%), Postives = 127/239 (53.14%), Query Frame = 1 Query: 130 IKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGS-LRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 I + + + ++++R+L + +L I ++ +H +EV D A + AD+ D + +AAG L L G+PI +KDN+ TK + TT+ S L V P ++ V +L ++GA+++GK +L E++ S++ S F G NP+ P SLG++T GSI P+S VVGLKPT G SR G++ D VGP +V+DAA +L AIAG D D Sbjct: 3 IAEWRQQLESGEVSARELTDHHLARIKAVDSSVHAFLEVTADRARADADRLD---EARAAGEDLPPLAGVPIAIKDNLCTKG-IRTTSSSRMLESFVPPYESTVTDRLWRSGAVLIGKTNLDEFAMGGSTET-SAF----GPTANPWNTGYVPGGSSGGSAAAVAAGECMASLGSDTGGSIRQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQVGPFATSVSDAAELLQAIAGEDPRD 232
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_SYNP6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gatA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25 Identity = 82/240 (34.17%), Postives = 125/240 (52.08%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A+I++L + + ++ ++ E L I L P L + V D A++QA D +++ A + L GIPI +KDN+ T+ + TT S L G V P ++ V +L +AGA+ +GK +L E++ SS S + NP+ L+ P + V+LG++T GSI P++ VVGLKPT GL SR G++ D +GP R+V D A +L AIAG D D Sbjct: 2 ASIRELHSQLVRKERSAVEIAEAALQRIETLEPQLKSFLHVTADQAIAQAKAVD--QRIAAGEEISLLAGIPIGIKDNLCTRG-IPTTCASKILQGFVPPYESTVTQRLAEAGAVAVGKTNLDEFA-VGSSTENSAYQTTA----NPWDLTRVPGGSSGGSAAAVAADECVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFSRSVEDTAILLGAIAGHDPKD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_SYNJB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. GN=gatA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25 Identity = 81/240 (33.75%), Postives = 122/240 (50.83%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + I+ L + ++ ++ YL + +L P L I V + AL QA D +++A ++ L GIP+ +KDN+ T+ + TT S L G + P ++ V +L AG + +GK +L E++ SS S F + NP+ L+ P + A V+LG++T GSI P++ VVGLKPT GL SR G++ D VGP RTV D A +L IAG D D Sbjct: 2 SVIRALHRQLVTKERSAEEIAREYLERLAQLEPQLKSFITVTEELALQQARAVD--ARIRAGEAIGPLAGIPLAVKDNLCTQG-IRTTCASRMLEGFIPPYESTVTARLAAAGMVTVGKTNLDEFA-MGSSTENSAFQ----RTANPWDLTRVPGGSSGGSAAAVAADQAVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAFASSLDQVGPFGRTVEDVALLLQGIAGHDPMD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_SYNJA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain JA-3-3Ab) GN=gatA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25 Identity = 79/239 (33.05%), Postives = 120/239 (50.21%), Query Frame = 1 Query: 124 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + I+ L + ++ ++ YL + +L P L I V + Q KA + +++A + L GIP+ +KDN+ T+ + TT S L G + P ++ V +L AG + +GK +L E++ SS S F + NP+ L+ P + A V+LG++T GSI P++ VVGLKPT GL SR G++ D VGP RTV D A +L IAG D D Sbjct: 2 SVIRALHRQLVTKERSAEEIAREYLERLAQLEPQLKSFITVTEELALQQAKA-VDARIRAGEEIGPLAGIPLAVKDNLCTQG-IRTTCASRMLEGFIPPYESTVTARLAAAGMVTVGKTNLDEFA-MGSSTENSAFQ----RTANPWDLTRVPGGSSGGSAAAVAADQAVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAFASSLDQVGPFGRTVEDVALLLQGIAGHDPLD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_RENSM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=gatA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25 Identity = 85/227 (37.44%), Postives = 119/227 (52.42%), Query Frame = 1 Query: 163 KLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++TS Q+ + YL I ++ L+ + +N + AL A + D +R A L L G+PI +KD I TK + TTAGS L G + P DA V+ K+R A ILGK +L E++ SS S F G +NP+ L+ P A ++LGT+T GSI P + VG+KPT G SR G I + D +GP+ RTV DAA + + I G D D Sbjct: 20 EVTSVQVTQAYLDRIALVDGELNAFLHLNAEEALRVAAEVDADRA--AGKELHELAGVPIAIKDLIVTKGQP-TTAGSKILEGWISPYDATVIEKIRAAKMPILGKTNLDEFA-MGSSTEHSAF----GPTRNPWDLTRIPGGSGGGSAAAVAAFEAPLALGTDTGGSIRQPGAVTGTVGVKPTYGGVSRYGAIAMASSLDQIGPVSRTVLDAALLQEVIGGHDPKD 238
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_METAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina acetivorans GN=gatA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25 Identity = 82/233 (35.19%), Postives = 118/233 (50.64%), Query Frame = 1 Query: 142 QLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 Q+ K + ++ ++ YL I + ++G I V+ AL QA K D E G L G+PI +KDNI+ N+ GS L G V P +A V+ KL AGA+ILGK +L E++ S++ + G NP+ L P A +LG++T GS+ CP++ VVGLKPT G SR GV+ + VGP+ V D A ++D IAG+D D Sbjct: 10 QVKDKIKESSAEEVTAGYLEVIEKSK--INGYITVSDKALEQAKKIDVE------GHEGPLAGVPIAIKDNISVVGLPNS-CGSKILEGYVPPFNAHVIEKLLDAGAVILGKTNLDEFAMGSSTE-----TSYYGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAILMDVIAGYDRRD 228 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |