CV884890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CORDI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium diphtheriae GN=gatA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25 Identity = 80/227 (35.24%), Postives = 114/227 (50.22%), Query Frame = 1 Query: 163 KLTSRQLVEFYLGEIHRLNPLLHGVIEVN-PDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 ++TSR++ + +L I+ ++ LH + V +AL+ AD D E K L G+P+ LKD T D TT S L G V P DA V K+R+AG ILGK ++ E++ SS S + G NP+ + P A + +GT+T GSI P++ + VG+KPT G SR G++ D GP RTV D A + + IAG D YD Sbjct: 27 EVTSREVTQAHLDRINDVDGTLHAFLHVGVEEALAAADAVD-ESLDKGEAPASALAGVPLALKDVFVTTDAP-TTCASKMLEGYVAPYDATVTKKIREAGIPILGKTNMDEFA-MGSSTENSAY----GPTLNPWDIERTPGGSGGGTSAALASGEAPLGIGTDTGGSIRQPAALTNTVGVKPTYGTVSRYGLVACASSLDQGGPTARTVLDTALLHEVIAGHDKYD 246
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_SYNSC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain CC9605) GN=gatA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.529e-25 Identity = 83/243 (34.16%), Postives = 127/243 (52.26%), Query Frame = 1 Query: 118 REATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRG-LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 R+ TI + + +++SR+LV+ +L + P L+ +EV D A ++A + D + +AAG G L G+P+ +KDN+ TK + TT S L V P ++ V +L +AG +++GK +L E++ S++ S F G +NP+ + P SLG++T GSI P+S VVGLKPT G SR G++ D VGP +VAD A +L IAG D D Sbjct: 4 RDMTISAWRQQLQSGEVSSRELVDQHLKRLESSEPSLNAFVEVTADQARAEASRID---EARAAGEALGPLAGLPLAIKDNLCTKG-VRTTCSSRMLEQFVPPYESTVTERLWQAGGVLVGKTNLDEFAMGGSTET-SAF----GATQNPWNTAHVPGGSSGGSAAAVAAGSCVASLGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFAGSVADVAELLQVIAGPDPRD 237
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_SYNP2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=gatA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.529e-25 Identity = 77/195 (39.49%), Postives = 109/195 (55.90%), Query Frame = 1 Query: 256 ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 AL+QA + D K+ A ++ L GIPI +KDN+ TK + TT S L G V ++ V +L++AGAI++GK +L E++ SS SG+ G NP+ ++ P A ++LG++T GSI P+S VVGLKPT GL SR G++ D +GP RTV D A +L+AIAG D D Sbjct: 47 ALAQAAQVD--AKIAAGETIGLLEGIPIAIKDNLCTKG-IQTTCASRILEGFVPTYESTVTQELQEAGAIMVGKTNLDEFA-MGSSTENSGYQVTG----NPWDVTRVPGGSSGGSAAAVAAGEAPIALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARTVEDTAILLEAIAGHDPKD 233
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_DESDA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=gatA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.529e-25 Identity = 89/232 (38.36%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 148 AFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 A ++ +L++ + L I P L ++ VN + AL++A D E + R L G+P+ LKD +T+ M TTAGS L G DA V KL +AGA+ILGK +L E++ SS S F +NP+ L+ P SLGT+T GSI P+S VGLKPT G SR GVI D VGP+ R+V D A VL AIAG+D D Sbjct: 15 ALQKKELSAVDVTTACLDRITATEPHLAALLYVNAENALARATTLDSE----GPDAARPLWGVPVTLKDAFSTRG-MPTTAGSRMLEGYTPFYDAFAVQKLHEAGAVILGKTNLDEFA-MGSSTENSAFKVT----RNPWNLNKVPGGSSGGSAASVTAGQCFASLGTDTGGSIRQPASFCGCVGLKPTYGRVSRYGVIAYGSSLDQVGPLTRSVEDCARVLTAIAGYDSRD 236
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_SYNPX (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain WH8102) GN=gatA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.528e-25 Identity = 83/239 (34.73%), Postives = 122/239 (51.05%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 TI + + ++SR+LV+ +L + + P L+ +EV + A + AD+ D R A L L G+P+ +KDN+ T+ + TT S L V P ++ V +L AGA+++GK +L E++ S++ S F G KNP+ + P SLG++T GSI P+S VVGLKPT G SR G++ D VGP VADAA +L IAG D D Sbjct: 2 TISAWRQRLQAGGVSSRELVDEHLQRLEQSEPSLNAFVEVTAERARADADRVDQARA--AGEDLGPLAGLPLAIKDNLCTRG-VRTTCSSRMLEQFVPPYESTVTDRLWGAGAVLVGKTNLDEFAMGGSTET-SAF----GATKNPWNIEHVPGGSSGGSAAAVASGSCLASLGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFAGCVADAAELLQVIAGHDQRD 232
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSEU2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gatA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.528e-25 Identity = 80/243 (32.92%), Postives = 116/243 (47.74%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ K +S +L L I L+P L+ I + D A++QA AD R AAG L G P+ KD T+ + T+ GS L P DA VV +L AG + LGK ++ E++ +++ S G KNP+ L P L + GT+T GSI P++ ++ GLKPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 1 MHQMTLAEIARGLADKKFSSEELTRVLLSRIATLDPQLNSFISLTEDLAITQAQAADARR---AAGENGPLLGAPLAHKDLFCTQG-IRTSCGSLMLDNFKAPYDATVVSRLASAGTVTLGKTNMDEFAMGSANE-----SSHYGAVKNPWNLECVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSEPK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas putida (strain KT2440) GN=gatA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.528e-25 Identity = 82/243 (33.74%), Postives = 115/243 (47.33%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ +S +L L I +L+P ++ I V D AL QA AD R AAG L G PI KD T + T+ GS L P DA VV KL +AG + LGK ++ E++ +++ S G KNP+ L P L + GT+T GSI P++ ++ GLKPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 1 MHQLTLAEIARGLADKSFSSEELTGALLARIKQLDPQINSFISVTEDLALGQARAADARR---AAGETSALLGAPIAHKDLFCTNG-VRTSCGSKMLDNFKAPYDATVVAKLAEAGMVTLGKTNMDEFAMGSANE-----SSHYGAVKNPWNLEHVPGGSSGGSAAAVAARLLPATTGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_PSEPG (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas putida (strain GB-1) GN=gatA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.528e-25 Identity = 82/243 (33.74%), Postives = 115/243 (47.33%), Query Frame = 1 Query: 115 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 + + T+ ++ +S +L L I +L+P ++ I V D AL QA AD R AAG L G PI KD T + T+ GS L P DA VV KL +AG + LGK ++ E++ +++ S G KNP+ L P L + GT+T GSI P++ ++ GLKPT G SR G+I D GP+ RT D A +L +AGFD D Sbjct: 1 MHQFTLAEIARGLADKSFSSEELTRALLARIKQLDPQINSFISVTEDLALGQARAADARR---AAGETGALLGAPIAHKDLFCTNG-VRTSCGSKMLDNFKAPYDATVVAKLAEAGMVTLGKTNMDEFAMGSANE-----SSHYGAVKNPWNLEHVPGGSSGGSAAAVAARLLPATTGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_MARMS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Marinomonas sp. (strain MWYL1) GN=gatA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.528e-25 Identity = 81/241 (33.61%), Postives = 122/241 (50.62%), Query Frame = 1 Query: 121 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 E +I L + ++S +L +L I +L+P L+ I V+ AL QA AD + +G L GIP+ KD T+ + TT GS L V P ++ V ++++AGA++LGK ++ E++ SS S + G KNP+ L P LA + GT+T GSI P+S + GLKPT G SR G+I D GP+ ++ D A+++ A+AGFD D Sbjct: 3 EQSISTLAQKLRNKDISSVELTRLFLARIAKLDPQLNSFITVSEQHALEQAAAADV---LLQSGKGTSLTGIPVAHKDLFCTEGTL-TTCGSKMLHNFVPPYESTVTSRIQQAGAVMLGKTNMDEFA-MGSSNENSFY----GAVKNPWNLDMVPGGSSGGSAAAIAAGLAVAATGTDTGGSIRQPASFCGITGLKPTYGRVSRFGMIAYASSLDQGGPMAKSAEDCAHLMQAMAGFDEKD 234
BLAST of CV884890 vs. ExPASy Swiss-Prot
Match: GATA_CYAA5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain ATCC 51142) GN=gatA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.528e-25 Identity = 83/239 (34.73%), Postives = 123/239 (51.46%), Query Frame = 1 Query: 127 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCXXXXXXXXXXXXNLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 840 +I++L + ++ ++ L I+ ++ + ++V D AL A K D K+ + L GIPI +KDN+ T + TT GS L V P ++ V KL+ AGA+++GK +L E++ SS SG+ NP+ LS P + V+LG++T GSI P+S VVGLKPT GL SR G++ D +GP R V DAA +L AIAG+D D Sbjct: 3 SIRELHQQLVNKERSAVEITTEALERINAVDSKVKSFLQVTADHALETAKKVD--EKIAKNEEIGLLAGIPIGIKDNMCTTG-IKTTCGSKILANFVPPYESTVTQKLKDAGAVMVGKTNLDEFA-MGSSTENSGYQVTA----NPWDLSRVPGGSSGGSAAAVAASECVVALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARNVQDAAILLGAIAGYDPKD 233 The following BLAST results are available for this feature:
BLAST of CV884890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884890 ID=CV884890; Name=CV884890; organism=Citrus sinensis; type=EST; length=866bpback to top |