CV884885
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884885 vs. ExPASy Swiss-Prot
Match: H2AV1_DICDI (Histone H2A.v1 OS=Dictyostelium discoideum GN=H2Av1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.122e-14 Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = -3 Query: 274 NKDKDKDKKRPI--------SRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTK 627 N +K +K++ + SRS+RA + FPV RI + ++ R + A V+LA++LEYLT E+LEL+ + RITP+H+ L+I D EL+ L+K TIA GGV IH L++ K Sbjct: 112 NNEKSNEKQKSVKFANKINESRSARADLTFPVSRIEKMIREGRFTK-RCSSDAPVFLAAVLEYLTLEILELSITYANQKNKTRITPQHIHLSICCDAELNDLLKNVTIANGGVPKFIHPILLDTPKK 237
BLAST of CV884885 vs. ExPASy Swiss-Prot
Match: H2AV2_DICDI (Histone H2A.v2 OS=Dictyostelium discoideum GN=H2Av2 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 51/123 (41.46%), Postives = 71/123 (57.72%), Query Frame = -3 Query: 271 NKDKDKDKKRPI--SRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGN-ASKDLKVKRITPRHLQLAIRGDEELDTLIKGT-IAGGGVIPHIHKSLINKTTKD 627 N K K+ I SRS+RAG+ V R+ + L+ R + RV T+ V+LA++LEY+ E+LEL+ N S K +RI RH+ L+I D EL L+ I GGV+ IH SL+ K KD Sbjct: 165 NSPKGSKFKKTIRSSRSTRAGLTISVSRVEKLLRGRRYSK-RVSPTSCVFLAAVLEYMVLELLELSLNELSLSKKSRRIKNRHINLSILKDVELSALLNDVIICSGGVLSSIHPSLL-KLKKD 285
BLAST of CV884885 vs. ExPASy Swiss-Prot
Match: H2A_OLILU (Histone H2A (Fragment) OS=Olisthodiscus luteus PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = -3 Query: 304 ATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHI 501 A A VYLA+ YLTAE+L LAGNA++D K RI PRH+QLA+ L+ L+ TIA GGV+P+I Sbjct: 1 AGAPVYLAAXXXYLTAEILXLAGNAARDNKKSRIIPRHVQLAVXXXXXLNKLLGNVTIAQGGVLPNI 67 The following BLAST results are available for this feature:
BLAST of CV884885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 243
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884885 ID=CV884885; Name=CV884885; organism=Citrus sinensis; type=EST; length=731bpback to top |