CV884884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884884 vs. ExPASy Swiss-Prot
Match: H2A2B_MOUSE (Histone H2A type 2-B OS=Mus musculus GN=Hist2h2ab PE=1 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 1.285e-28 Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = 3 Query: 105 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTK 455 K K + + SRSSRAG+QFPVGR+HR L+ A RVGA A VY+A++LEYLTAE+LELAGNA++D K RI PRHLQLA+R DEEL+ L+ G TIA GGV+P+I L+ K T+ Sbjct: 6 KQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of CV884884 vs. ExPASy Swiss-Prot
Match: H2A_SIPNU (Histone H2A OS=Sipunculus nudus PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 71/114 (62.28%), Postives = 86/114 (75.44%), Query Frame = 3 Query: 117 KDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTK 455 K K + SRSSRAG+QFPVGRIHR L+ A R+GA A VYLA+++EYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K T+ Sbjct: 9 KAKGKSKSRSSRAGLQFPVGRIHRLLRKGNYAE-RIGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTQ 121
BLAST of CV884884 vs. ExPASy Swiss-Prot
Match: H2A2C_MOUSE (Histone H2A type 2-C OS=Mus musculus GN=Hist2h2ac PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 71/118 (60.17%), Postives = 88/118 (74.58%), Query Frame = 3 Query: 105 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKTTK 455 K K + + SRSSRAG+QFPVGR+HR L+ A RVGA A VY+A++LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ K TIA GGV+P+I L+ K T+ Sbjct: 6 KQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of CV884884 vs. ExPASy Swiss-Prot
Match: H2A2C_HUMAN (Histone H2A type 2-C OS=Homo sapiens GN=HIST2H2AC PE=1 SV=4) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 71/118 (60.17%), Postives = 88/118 (74.58%), Query Frame = 3 Query: 105 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKTTK 455 K K + + SRSSRAG+QFPVGR+HR L+ A RVGA A VY+A++LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ K TIA GGV+P+I L+ K T+ Sbjct: 6 KQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of CV884884 vs. ExPASy Swiss-Prot
Match: H2A2C_BOVIN (Histone H2A type 2-C OS=Bos taurus GN=HIST2H2AC PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 71/118 (60.17%), Postives = 88/118 (74.58%), Query Frame = 3 Query: 105 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKTTK 455 K K + + SRSSRAG+QFPVGR+HR L+ A RVGA A VY+A++LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ K TIA GGV+P+I L+ K T+ Sbjct: 6 KQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of CV884884 vs. ExPASy Swiss-Prot
Match: H2A2A_RAT (Histone H2A type 2-A OS=Rattus norvegicus GN=Hist2h2aa3 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 71/118 (60.17%), Postives = 88/118 (74.58%), Query Frame = 3 Query: 105 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKTTK 455 K K + + SRSSRAG+QFPVGR+HR L+ A RVGA A VY+A++LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ K TIA GGV+P+I L+ K T+ Sbjct: 6 KQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of CV884884 vs. ExPASy Swiss-Prot
Match: H2A2A_MOUSE (Histone H2A type 2-A OS=Mus musculus GN=Hist2h2aa1 PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 71/118 (60.17%), Postives = 88/118 (74.58%), Query Frame = 3 Query: 105 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKTTK 455 K K + + SRSSRAG+QFPVGR+HR L+ A RVGA A VY+A++LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ K TIA GGV+P+I L+ K T+ Sbjct: 6 KQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of CV884884 vs. ExPASy Swiss-Prot
Match: H2A2A_HUMAN (Histone H2A type 2-A OS=Homo sapiens GN=HIST2H2AA3 PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 71/118 (60.17%), Postives = 88/118 (74.58%), Query Frame = 3 Query: 105 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKTTK 455 K K + + SRSSRAG+QFPVGR+HR L+ A RVGA A VY+A++LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ K TIA GGV+P+I L+ K T+ Sbjct: 6 KQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of CV884884 vs. ExPASy Swiss-Prot
Match: H2A_ONCMY (Histone H2A OS=Oncorhynchus mykiss PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.192e-28 Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = 3 Query: 105 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTK 455 K K + + +RSSRAG+QFPVGR+HR L+ A RVGA A VYLA++LEYLTAE+LELAGNA++D K RI PRHLQLA+R DEEL+ L+ G TIA GGV+P+I L+ K T+ Sbjct: 6 KTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of CV884884 vs. ExPASy Swiss-Prot
Match: H2A_ASTRU (Histone H2A OS=Asterias rubens PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.192e-28 Identity = 69/113 (61.06%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 117 KDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTT 452 K + + SRSSRAG+QFPVGR+HR L+ A RVGA A VYLA+++EYL AE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K T Sbjct: 9 KARAKAKSRSSRAGLQFPVGRVHRFLRKGNYAE-RVGAGAPVYLAAVMEYLAAEILELAGNAARDNKKTRINPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120 The following BLAST results are available for this feature:
BLAST of CV884884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 243
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884884 ID=CV884884; Name=CV884884; organism=Citrus sinensis; type=EST; length=740bpback to top |