CV884873
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884873 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.482e-40 Identity = 76/158 (48.10%), Postives = 114/158 (72.15%), Query Frame = -2 Query: 400 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 867 EVKS+EMHHE L+EALPGDN+GFNV+ V+ D+KRG VA ++ + P R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ K+D ++G +E+ P+F+K GDA +V + P KP+V+E + P LGRFA+RDM T+A G++ S+++ Sbjct: 269 EVKSIEMHHEPLEEALPGDNIGFNVRGVSKNDIKRGDVAGHTTNPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 426
BLAST of CV884873 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 1.935e-40 Identity = 77/155 (49.68%), Postives = 111/155 (71.61%), Query Frame = -2 Query: 403 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 867 EV+S+E HH + +A PGDN+GFNV+ V KD+KRG V + + P A FT+++I++ HP + NGY PV+ HT+ +A + SELV+K+D R+G+E EK P+FLK GD +VK P KP+ VE ++++PPLGRFA+RDM +TV VG+I V+ Sbjct: 275 EVRSIETHHTKMDKAEPGDNIGFNVRGVEKKDIKRGDVVGHPNNPPT-VADEFTARIIVVWHPTALANGYTPVIHVHTASVACRVSELVSKLDPRTGQEAEKNPQFLKQGDVAIVKFKPIKPLCVEKYNEFPPLGRFAMRDMGKTVGVGIIVDVK 428
BLAST of CV884873 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.935e-40 Identity = 80/161 (49.69%), Postives = 109/161 (67.70%), Query Frame = -2 Query: 394 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAA---NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 867 EV+S+EMHHE ++ A PGDN+GFNVK V D+ RG VA + D+PA F +Q++++ HP I GY PV CHT+ +A KF EL+ KID +G+ +E+ P FLK G+A V++ PTKPMV+E S P LGRFA+RDM QTVA G+ +EK++ Sbjct: 264 EVRSIEMHHEEIERAEPGDNIGFNVKGVGKNDISRGDVACHP-DEPATVVTPDDTFIAQIVVLQHPSAITAGYTPVFHCHTAQVACKFEELIEKIDPATGEVIEENPDFLKTGEAAKVRIRPTKPMVIEEVSFIPQLGRFAIRDMGQTVAAGMCVKIEKEE 423
BLAST of CV884873 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.935e-40 Identity = 75/155 (48.39%), Postives = 113/155 (72.90%), Query Frame = -2 Query: 403 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 867 EV+S+EMHH+ LQ+A PGDN+GFNV+ ++ KD++RG VA + D P A FT+++ ++ HP I GY PV+ HT+ IA + +E+ K+D R+G+ +EK P+FLK GDA +VK P KPMV+E +S++P LGRFA+RDM +T+ +G++ V+ Sbjct: 277 EVRSIEMHHQPLQQAEPGDNIGFNVRGISKKDIRRGDVAGHV-DKPPTVAEEFTARIFVIWHPSAITVGYTPVIHAHTASIAARITEIQAKLDPRTGQVIEKNPQFLKAGDAAIVKFKPIKPMVIEKYSEFPQLGRFAMRDMGKTIGIGIVVDVK 430
BLAST of CV884873 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.527e-40 Identity = 77/150 (51.33%), Postives = 108/150 (72.00%), Query Frame = -2 Query: 418 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 867 EVKS+EMHHE +++A PGDN+GFNV+ V D++RG VA + D+P + A FT+Q++++ HPG I GY PV CHT+ +A F ELV K++ +G+ E+ P FLK G+A +VK+ PTKP+V+E D P +GRFA+RDM QTVA G+ Sbjct: 257 EVKSIEMHHEMIEQAEPGDNIGFNVRGVGKNDIRRGDVAGHL-DNPPKVAKEFTAQIVVLQHPGVITVGYTPVFHCHTAQVACTFLELVQKMNPATGQVEEENPDFLKTGNAAVVKVKPTKPLVIEKIKDIPHMGRFAIRDMGQTVAAGM 405
BLAST of CV884873 vs. ExPASy Swiss-Prot
Match: EF1A_METS5 (Elongation factor 1-alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=tuf PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.527e-40 Identity = 78/157 (49.68%), Postives = 113/157 (71.97%), Query Frame = -2 Query: 403 TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 873 + EV+S+E HH L++A PGDN+GFNV+ + KD+KRG V ++ + P A FT++VI++ HP + GY PV+ HT+ IA + SE+V ++D ++GKE EK P+F+K G++ +VK P KP+ VE FSD+PPLGRFA+RDM +TV VGVI V+ Sbjct: 273 SAEVRSIETHHTKLEKAEPGDNIGFNVRGIDKKDVKRGDVVGHTTNPPT-VAEEFTARVIVVWHPTALAVGYTPVVHVHTASIACRVSEIVARLDPKTGKEAEKNPQFIKQGESAIVKFKPIKPLCVEKFSDFPPLGRFAMRDMGKTVGVGVINDVK 428
BLAST of CV884873 vs. ExPASy Swiss-Prot
Match: EF1A_SULTO (Elongation factor 1-alpha OS=Sulfolobus tokodaii GN=tuf PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.300e-40 Identity = 80/157 (50.96%), Postives = 114/157 (72.61%), Query Frame = -2 Query: 397 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 867 EV+S+E HH +++A PGDN+GFNV+ V KD+KRG VA S + P A FT+Q+I++ HP + GY PV+ HT+ +A + +EL +KID ++GKE+EK P+FLK+GD+ +VKM P K +VVE F ++P LGRFA+RDM +TV VGV+ V+ K Sbjct: 275 EVRSIETHHTKIEKAEPGDNIGFNVRGVEKKDIKRGDVAG-SLNVPPTVADEFTAQIIVIWHPTAVSVGYTPVVHIHTASVACRITELTSKIDPKTGKEVEKNPQFLKSGDSAIVKMKPIKELVVEKFREFPALGRFAMRDMGKTVGVGVVIDVKPK 430
BLAST of CV884873 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 4.311e-40 Identity = 78/157 (49.68%), Postives = 108/157 (68.79%), Query Frame = -2 Query: 397 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 867 +VKS+EMHHE LQ+A PGDN+GFNV+ +A D+KRG V + D P FT+Q+I++NHP I GY PV HT+ +A + E+V ++ + G L+++P F+KNGD +VK+IP KP+V+E S+ P LGRFAVRDM QTVA G +EK+ Sbjct: 269 DVKSIEMHHEPLQQAEPGDNIGFNVRGIAKNDIKRGDVCGHL-DTPPTVVKAFTAQIIVLNHPSVIAPGYKPVFHVHTAQVACRIDEIVKTLNPKDGTTLKEKPDFIKNGDVAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CV884873 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.311e-40 Identity = 79/157 (50.32%), Postives = 106/157 (67.52%), Query Frame = -2 Query: 397 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 867 E+KS+EMHHE + +ALPGDNVGFNV+ + D++RG V S D P A F +QV++++HP + GY PV CHT+ IA F EL+ K+D R+G+ E+ P FLK GDA +VK+ PT+PMV+E + P LGRFAVRDM T+A GV + K Sbjct: 267 EIKSIEMHHEEIPQALPGDNVGFNVRGIGKGDIRRGDVCGPS-DVPPTVAEEFIAQVVVLHHPSALTVGYTPVFHCHTAQIACSFVELMKKLDPRTGQVKEENPTFLKTGDAAIVKIRPTQPMVIEKVKEIPQLGRFAVRDMGSTIAAGVCMDITPK 422
BLAST of CV884873 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.630e-40 Identity = 78/158 (49.37%), Postives = 110/158 (69.62%), Query Frame = -2 Query: 403 LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 876 L EVK++E HH +++A PGDN+GFNVK V KD+KRG VA S D P A FT+++++M HP I GY PV+ HT+ +A + +E++ KID R+GKE+EK P FLK GD +VK P KP+VVE +SD+ LGRFA+RDM +T+ +G + ++ Sbjct: 274 LVAEVKTIETHHTKIEKAEPGDNIGFNVKGVEKKDIKRGDVAG-SLDVPPTVADEFTARIMVMWHPTAIAVGYTPVIHVHTASVACRITEIIAKIDPRTGKEIEKNPHFLKQGDIAIVKFKPIKPLVVEKYSDFQGLGRFAMRDMGKTIGIGQVLEIK 430 The following BLAST results are available for this feature:
BLAST of CV884873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884873 ID=CV884873; Name=CV884873; organism=Citrus sinensis; type=EST; length=877bpback to top |