CV884872
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 5.797e-70 Identity = 121/243 (49.79%), Postives = 165/243 (67.90%), Query Frame = 1 Query: 61 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGG 789 +K HIN+ V+GHVD+GKST G L+Y+ G +D++ + E+ A +M K F +AW+LD+ K ERERG+TI+ FET + + T+ID PGHRDF+KNMI G SQAD A+ +I + G FE I GQ REH L TLG++Q++ NKMD Y + RY+++ EVS LK +GY+P K+ FVP+S +GDN+ +S+N WY GPTLL+ LD P RP+DKPLRLP+QDV+ I G Sbjct: 14 QKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKGFKEIEEMAKKMGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDVV--NYDQKRYEQVKSEVSKLLKLLGYDPSKIHFVPVSAVKGDNVRTKSSNTPWYNGPTLLEVLDTFQPPPRPTDKPLRLPIQDVFSITG 254
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_METBU (Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM 6242) GN=tuf PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.291e-69 Identity = 126/244 (51.64%), Postives = 167/244 (68.44%), Query Frame = 1 Query: 61 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 +K H+N+ VIGHVD GKST G L+++ G + +IE+++ EA E K SF +AWV+D LK ERERG+TIDI+ +F+T +YY TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA KYS+ RY+E+ KEVS L VG+ + VPF+P S FEGDN+ + S N WY GP LL+ L+N+ P +P PLR+P+QD Y I GI Sbjct: 3 DKPHMNLAVIGHVDHGKSTFVGRLMFETGAVPAHLIEKYKAEAKEKGKESFAFAWVMDTLKEERERGVTIDISHKRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHVFLSRTLGINQLIVAINKMDAA--KYSEDRYNEVKKEVSQLLGMVGFKADDVPFIPTSAFEGDNITKSSANTPWYTGPALLECLNNLTVPSKPDTLPLRIPVQDAYTISGI 237
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.687e-69 Identity = 119/243 (48.97%), Postives = 167/243 (68.72%), Query Frame = 1 Query: 61 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGG 789 +K HIN+ V+GHVD+GKST G L+Y+ G +D++ ++ E+ A ++ K F +AW+LD+ K ERERG+TI+ FET + + T+ID PGHRDF+KNMI G SQAD A+ +I + G FEA I GQ REH L TLGV+Q++ NKMD Y + RY+++ EVS LK +GY+P K+ F+P+S +GDN+ +S+N WY GPTLL+ D+ P+RP DKPLR+P+QDV+ I G Sbjct: 14 QKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKALKEIEEMAKKIGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFEAAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDVV--NYDQKRYEQVKAEVSKLLKLLGYDPSKIHFIPVSAIKGDNIKTKSSNTPWYTGPTLLEVFDSFQPPQRPVDKPLRMPIQDVFTITG 254
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_PYRKO (Elongation factor 1-alpha OS=Pyrococcus kodakaraensis GN=tuf PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 6.409e-69 Identity = 131/247 (53.04%), Postives = 172/247 (69.64%), Query Frame = 1 Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 M KEK H+NIV IGHVD GKSTT G L++ I + +I++FE E E K SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++ ++ ++V L+ +GY + P +PIS +EGDN++++S + WY GPTLL+ALD I EP +P DKPLR+P+QDVY I G+ Sbjct: 1 MAKEKPHVNIVFIGHVDHGKSTTIGRLLFDTANIPENIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGINHIIVAINKMDMV--NYDEKKFKQVAEQVKKLLQMLGY--KDFPIIPISAWEGDNVVKKSDKMPWYNGPTLLEALDQIPEPPKPVDKPLRIPIQDVYSIKGV 234
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_THEGJ (Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 8.371e-69 Identity = 132/247 (53.44%), Postives = 172/247 (69.64%), Query Frame = 1 Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 M KEK H+NIV IGHVD GKSTT G L++ I + +I++FE E E K SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++++ +V LK +GY + P +PIS +EGDN++++S + WYKGPTL++ALD I EP +P DKPLR+P+QDVY I G+ Sbjct: 1 MAKEKPHVNIVFIGHVDHGKSTTIGRLLFDTANIPENIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGINHIIVAINKMDMV--NYDQKVFEKVKAQVEKLLKMLGY--KDFPVIPISAWEGDNVVKKSDKMPWYKGPTLIEALDQIPEPPKPIDKPLRIPIQDVYSIKGV 234
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_PYRHO (Elongation factor 1-alpha OS=Pyrococcus horikoshii GN=tuf PE=3 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.428e-68 Identity = 132/247 (53.44%), Postives = 172/247 (69.64%), Query Frame = 1 Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 M KEK H+NIV IGHVD GKSTT G L+Y G I + +I++FE E E K SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y + ++++ +V LK +GY + P +P S + GDN++++S + WY GPTL++ALD I EP++P DKPLR+P+QDVY I G+ Sbjct: 1 MPKEKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVTINKMDMV--NYDQKVFEKVKAQVEKLLKTLGY--KDFPVIPTSAWNGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPIDKPLRIPIQDVYSIKGV 234
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_UNCMA (Elongation factor 1-alpha OS=Uncultured methanogenic archaeon RC-I GN=tuf PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.181e-68 Identity = 120/247 (48.58%), Postives = 171/247 (69.23%), Query Frame = 1 Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 M K HIN+ VIGH+D GKST G L+++ G + +IE+++KEA K +F++AWV+D LK ERERGITIDIA +F+T +YY TV+D PGHRDF+KNMITG SQAD A+L+ + G + QT+EH L+ TLG+ Q+I NKMDA Y + RY+E+ +EVS L+ +G+ P+++PF+P S F+G N+ + + WY G T+L+AL+ + EP++P+ PLR+P+QDVY I GI Sbjct: 1 MAATKPHINLAVIGHIDHGKSTLVGRLLFETGAVPAHIIEQYKKEAESKGKGTFEFAWVMDSLKEERERGITIDIAHRRFDTEKYYFTVVDCPGHRDFVKNMITGASQADAAILVCAAPDGVMQ-------QTKEHIFLSKTLGINQLIIAVNKMDAI--NYDQKRYNEVKEEVSKILRMIGFKPDQIPFIPTSAFKGTNIAKHAEETPWYTGVTILEALNALKEPEKPTQLPLRVPIQDVYTISGI 238
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.181e-68 Identity = 130/247 (52.63%), Postives = 172/247 (69.64%), Query Frame = 1 Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 M KEK H+NIV IGHVD GKSTT G L++ I + +I++FE E E K SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++ ++ ++V L +GY + P +PIS +EGDN++++S + WY GPTL++ALD I EP +P+DKPLR+P+QDVY I G+ Sbjct: 1 MAKEKPHVNIVFIGHVDHGKSTTIGRLLFDTANIPENIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIGHIIVAINKMDMV--DYDEKKFKQVSEQVKKLLMMLGY--KDFPIIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQIPEPPKPTDKPLRIPIQDVYSIKGV 234
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.181e-68 Identity = 131/247 (53.04%), Postives = 172/247 (69.64%), Query Frame = 1 Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 M KEK H+NIV IGHVD GKSTT G L+Y G I + +I++FE E E K SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y + ++++ +V L+ +GY + P +P S + GDN++++S + WY GPTL++ALD I EP++P DKPLR+P+QDVY I G+ Sbjct: 1 MPKEKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVTINKMDMV--NYDQKVFEKVKAQVEKLLRTLGY--KDFPVIPTSAWNGDNIVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGV 234
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 9.255e-68 Identity = 129/247 (52.23%), Postives = 170/247 (68.83%), Query Frame = 1 Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 M KEK HINIV IGHVD GKSTT G L++ I + +I++FE E E K SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ T G QT+EHA LA TLG+ ++ NKMD Y + ++ + ++V L +GY + P +PIS +EGDN++++S + WY GPTL++ALD + EP +P+DKPLR+P+QDVY I G+ Sbjct: 1 MAKEKPHINIVFIGHVDHGKSTTIGRLLFDTANIPENIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAVTDGVMP-------QTKEHAFLARTLGINNILVAVNKMDMV--NYDEKKFKAVAEQVKKLLMMLGY--KNFPIIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQMPEPPKPTDKPLRIPIQDVYSIKGV 234 The following BLAST results are available for this feature:
BLAST of CV884872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884872 ID=CV884872; Name=CV884872; organism=Citrus sinensis; type=EST; length=794bpback to top |