CV884872
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.062e-67 Identity = 124/247 (50.20%), Postives = 168/247 (68.02%), Query Frame = 1 Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 M KEK HIN+ IGHVD GKST G L+Y G I+ + ++ + K+ ++D L+ ERERG+TID+A KFET Y T++D PGHRDF+KNMITG SQAD A+L++ + G QT+EHA LA TLG+ Q+I NKMD Y + RY+E+ +EV+ LK +GYN +++PF+PIS FEGDN++E+S N WY GPTLL+ALDN+ P++P+DKPLR+P+QDVY I G+ Sbjct: 1 MAKEKEHINLAFIGHVDHGKSTLVGRLLYDTGVIEDK----------DLGEGEDKFRVIMDTLEEERERGVTIDLAHTKFETDNYEFTIVDCPGHRDFVKNMITGASQADAAILVVAADDGVMP-------QTKEHAFLAKTLGIDQLIVAINKMDLVD--YDENRYEEVKQEVAELLKTIGYNVDEIPFIPISAFEGDNVVEKSDNTPWYDGPTLLEALDNLEPPEKPTDKPLRIPIQDVYSITGV 228
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 7.835e-67 Identity = 127/248 (51.21%), Postives = 170/248 (68.55%), Query Frame = 1 Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSS-YLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 M KEK +N+ IGHVD+GKSTT G L+ G ID ++IER ++EA+E K F++A+V+D LK ERERG+TIDIA KFE+ +Y T++D PGHRDFIKNMITG SQAD AVL+ D +A QTREH L TLGV Q+ NKMD T YS+ Y +V +S+ LK +GYNP + FVP++ F GDN +++S + WYKGPTL++ +D N P++P++ PLR+P+QDVY I G+ Sbjct: 1 MAKEKPVLNVAFIGHVDAGKSTTVGRLLLDSGTIDPQIIERLKREASEKGKAGFEFAYVMDGLKEERERGVTIDIAHKKFESKKYDVTIVDCPGHRDFIKNMITGASQADAAVLVCDVN----DAKTGLQPQTREHIFLIRTLGVNQLAVAINKMD--TVDYSEEEYKAMVDMLSNQLLKMLGYNPANIHFVPVASFVGDNNVKKSDKMPWYKGPTLVEVIDTFNPPEKPTNLPLRMPIQDVYTITGV 242
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_NATPD (Elongation factor 1-alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=tuf PE=3 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.977e-66 Identity = 123/247 (49.80%), Postives = 168/247 (68.02%), Query Frame = 1 Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 M ++K H N+ VIGHVD GKST G L+++ G + + VIE++ +EA E K F++A+V+D L ERERG+TIDIA +F+T YY T++D PGHRDF+KNMITG SQAD AVL++ + G QT+EH LA TLG+ ++I NKMD Y + +Y +V EV+ L++V +N E F+P S FEGDN+ E S N WY GP+LL+AL+++ EP+ P+D PLRLP+QDVY I GI Sbjct: 1 MSEDKPHQNLAVIGHVDHGKSTMVGRLLFETGSVPEHVIEQYREEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFDTDEYYFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VQPQTQEHVFLARTLGIDELIIAVNKMDLV--DYDENKYKAVVDEVNQLLEQVRFNTEDAKFIPTSAFEGDNVSEASENTSWYDGPSLLEALNDLPEPQPPTDAPLRLPIQDVYTISGI 238
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_HALWD (Elongation factor 1-alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=tuf PE=3 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.292e-65 Identity = 122/244 (50.00%), Postives = 165/244 (67.62%), Query Frame = 1 Query: 61 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 +K H N+ +IGHVD GKST G L+++ G + + VIE+ +EA E K F++A+V+D L ERERG+TIDIA +F+T YY T++D PGHRDF+KNMITG SQAD AVL++ + G QTREH LA TLG+ ++I NKMD YS+ Y+++ EV LK+V +N ++PIS FEGDN+ E S N W+ GP+LL+AL+N+ EP+ P+D PLRLP+QDVY I GI Sbjct: 3 DKPHQNLAIIGHVDHGKSTLVGRLLFETGSVPEHVIEQHREEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFDTEDYYFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VAPQTREHVFLARTLGINELIIGVNKMDIV--DYSEETYEDVKTEVDKLLKQVQFNANDAKYIPISAFEGDNVAESSDNTSWFDGPSLLEALNNLPEPQPPTDAPLRLPIQDVYTISGI 237
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 9.577e-65 Identity = 123/250 (49.20%), Postives = 166/250 (66.40%), Query Frame = 1 Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 M K K +N+ IGHVD+GKSTT G L+ G ID ++I R KEA E K F++A+V+D LK ERERG+TID+A KF T +Y T++D PGHRDFIKNMITG SQAD AVL+ +D G + QTREH L TLGV+Q+ NKMD T +S+A Y+E+ K + LK +G+NPE++ FVP++ GDN+ ++S WYKGPT+ + +D P++P++ PLRLP+QDVY I G+ Sbjct: 1 MAKTKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAKSGIQP------QTREHVFLIRTLGVRQLAVAVNKMD--TVNFSEADYNELKKMIGDQLLKMIGFNPEQINFVPVASLHGDNVFKKSERTPWYKGPTIAEVIDGFQPPEKPTNLPLRLPIQDVYSITGV 242
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.634e-64 Identity = 120/245 (48.98%), Postives = 166/245 (67.76%), Query Frame = 1 Query: 64 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD---WYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGG 789 K +N+VVIGHVD+GKST GH++Y LG I+KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ V F+P SG G+N+I RS + + WYKG LL+ +D+ P+R DKP RL + DV+K G Sbjct: 258 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSRSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQG 500
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.134e-64 Identity = 119/245 (48.57%), Postives = 165/245 (67.35%), Query Frame = 1 Query: 64 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD---WYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGG 789 K +N+VVIGHVD+GKST GH++Y LG ++KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ V F+P SG G+N+ RS + D WYKG LL+ +D+ P+R DKP RL + DV+K G Sbjct: 253 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLTSRSQSSDLTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQG 495
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 245.743 bits (626), Expect = 2.134e-64 Identity = 119/245 (48.57%), Postives = 165/245 (67.35%), Query Frame = 1 Query: 64 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD---WYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGG 789 K +N+VVIGHVD+GKST GH++Y LG ++KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ V F+P SG G+N+ RS + D WYKG LL+ +D+ P+R DKP RL + DV+K G Sbjct: 256 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLTARSQSSDLTTWYKGMCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQG 498
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.134e-64 Identity = 120/245 (48.98%), Postives = 166/245 (67.76%), Query Frame = 1 Query: 64 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD---WYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGG 789 K +N+VVIGHVD+GKST GH++Y LG I+KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ V F+P SG G+N+I RS + + WYKG LL+ +D+ P+R DKP RL + DV+K G Sbjct: 258 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQG 500
BLAST of CV884872 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.134e-64 Identity = 123/250 (49.20%), Postives = 166/250 (66.40%), Query Frame = 1 Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGI 792 M K K +N+ IGHVD+GKSTT G L+ G ID ++I R KEA E K F++A+V+D LK ERERG+TID+A KF T +Y T++D PGHRDFIKNMITG SQAD AVL+ +D G + QTREH L TLGV+Q+ NKMD T +S+A Y+E+ K + LK +G+NPE++ FVP++ GDN+ ++S WYKGPT+ + +D P++P++ PLRLP+QDVY I G+ Sbjct: 1 MAKTKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAKSGIQP------QTREHVFLIRTLGVRQLAVAVNKMD--TVNFSEADYNELKKMIGDQLLKMIGFNPEQINFVPVASLHGDNVFKKSERNPWYKGPTIAEVIDGFQPPEKPTNLPLRLPIQDVYTITGV 242 The following BLAST results are available for this feature:
BLAST of CV884872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884872 ID=CV884872; Name=CV884872; organism=Citrus sinensis; type=EST; length=794bpback to top |