CV884871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884871 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.286e-27 Identity = 81/224 (36.16%), Postives = 131/224 (58.48%), Query Frame = -2 Query: 188 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCD--TKQGYTQFGG----LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 841 QVEYA+EAI IG+ ++GVVL EK++TS LL+ S S +K+ +ID H+ CA++G+++DA +I+ AR++ Q + + Y EPM VE VQS+CD + G + G RPFGV+ L AG D+ G LY SDPSG + + Q+ L++ Y ++ E +LAL L + M+ ++T+ +ELA ++ K+++ + E L+ ++ Sbjct: 23 QVEYALEAIK---LGIGVQCEEGVVLAVEKRLTSPLLEPS-SIQKVVEIDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEK-GPSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQEKYSKTLTIAECQKLALTTLKQVMEE-AITTTNVELA---VITKADQKFKIYNKEELATVI 237
BLAST of CV884871 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.986e-27 Identity = 73/182 (40.11%), Postives = 104/182 (57.14%), Query Frame = -2 Query: 296 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMD 841 QVEYA EA+ ++IG+ + DGVVL +K++ S L++ S S EK++K DDH+ A AG ++DA LI+ AR QAQ Y EP+ VE L + + D Q YTQ GG RPFGV+ + G N +L+ +DPSG WK + L++ Y + + +E V LAL L+ D Sbjct: 25 QVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLMERS-SVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQYTQVGGARPFGVALIIGG-IVNGEPRLFETDPSGTPYEWKALAVGADRGDIRDYLEEHYDEGMDLDEGVDLALAALASVND 204
BLAST of CV884871 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.986e-27 Identity = 75/202 (37.13%), Postives = 109/202 (53.96%), Query Frame = -2 Query: 239 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQR-YTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPS 841 Q+EYA+ A+ +++GI + DGVVL EKK TS+L S EK+ I + +G+ D +L++ +R AQ Y Y E P + LVQ + Q TQ GG+RPFGVS L AG D+ G LY DPSG Y WK ++ L++ Y D++ ++AV A+ L +T + LT D +E+A V P+ Sbjct: 20 QIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELA-IGASLEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEK-GPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDDAVHTAILALKETFEG-ELTEDNIEIAVVSTKPT 218
BLAST of CV884871 vs. ExPASy Swiss-Prot
Match: PSA5_YEAST (Proteasome component PUP2 OS=Saccharomyces cerevisiae GN=PUP2 PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 5.093e-27 Identity = 78/232 (33.62%), Postives = 123/232 (53.02%), Query Frame = -2 Query: 164 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQP 841 QVEY++EAI +AIGI +K+GVVL EK+ TS LL+ S S EK+ +ID H+ CA++G+ +DA +I AR A + Y E + VE L QS+CD + + RPFGV+ L AG D + G+QL+ ++PSG + + Q+ L ++ ++ +EA L LK+L + M+ L + +L+ + K+ + E + +L K P Sbjct: 23 QVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLE-SDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELLVLKILKQVMEE-KLDENNAQLSCITKQDGFKIYDNEKTAELIKELKEKEAAESP 252
BLAST of CV884871 vs. ExPASy Swiss-Prot
Match: PSA7_PONAB (Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 6.651e-27 Identity = 68/185 (36.76%), Postives = 104/185 (56.22%), Query Frame = -2 Query: 293 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDS 841 QVEYA EAI +A+G+ +D VVL EKK +KL Q + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++ + VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y D+ + ++L +K L + + S Sbjct: 18 QVEYAQEAIKKGSTAVGVRGRDIVVLGVEKKSVAKL-QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQS 201
BLAST of CV884871 vs. ExPASy Swiss-Prot
Match: PSA7_SCHPO (Probable proteasome subunit alpha type-7 OS=Schizosaccharomyces pombe GN=SPBC106.16 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.135e-26 Identity = 71/204 (34.80%), Postives = 116/204 (56.86%), Query Frame = -2 Query: 233 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGK 841 QVEY EA+ +AI + + +V+ E+K KL Q ++ +K+ +D+HV A AG+ +DA ILI+ ARV+AQ + +P+ +E L + + +Q YTQ GG+RPFGVS L AG+D ++Y ++P+G Y WK + L++++K+ +SR+E + LA +S ++ S +ELA +M GK Sbjct: 19 QVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKL-QNVSNFQKIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLSRDETIHLA---VSSLLEVVQTASGNIELA---IMDPGK 215
BLAST of CV884871 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.135e-26 Identity = 67/185 (36.22%), Postives = 104/185 (56.22%), Query Frame = -2 Query: 293 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDS 841 QVEYA EA+ +A+G+ K+ VVL EKK +KL Q + K+ +D++V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L++ Y D+ + ++L +K L + + S Sbjct: 18 QVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKL-QDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQS 201
BLAST of CV884871 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.135e-26 Identity = 67/185 (36.22%), Postives = 104/185 (56.22%), Query Frame = -2 Query: 293 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDS 841 QVEYA EA+ +A+G+ K+ VVL EKK +KL Q + K+ +D++V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L++ Y D+ + ++L +K L + + S Sbjct: 18 QVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKL-QDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQS 201
BLAST of CV884871 vs. ExPASy Swiss-Prot
Match: PSA5_ENTHI (Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.482e-26 Identity = 80/223 (35.87%), Postives = 125/223 (56.05%), Query Frame = -2 Query: 188 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG-----LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 841 QVEYA EA+ + IGI +K+GVVL EK+++S L+ S S EK+ +IDDH+ AV+G+ +DA LI+ AR++AQ + + Y EP+ VE + Q++ D + + RPFGV+ L AG D+ G +L+ +DPSG + + QSIL + Y ++ EA LAL L + M+ L S +E+A L+ K K+++ + L+ Sbjct: 23 QVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGS-SIEKIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVALLIAGVDET-GPRLFQTDPSGMFIEFYAKATGAGTEAAQSILHEKYNKSMTLREAEILALSTLKQVMEE-KLNSKNVEVA---LVTVEKKKFEIMDTAFIENLI 239
BLAST of CV884871 vs. ExPASy Swiss-Prot
Match: PSA2_CAEEL (Proteasome subunit alpha type-2 OS=Caenorhabditis elegans GN=pas-2 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.482e-26 Identity = 70/195 (35.90%), Postives = 102/195 (52.31%), Query Frame = -2 Query: 260 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQ-LYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELA 841 Q+EYA+ A+ N ++G+ +KDGVVL E V S L E++ K H+ C +G+ D IL+ AR A Y Y E MP QLV + Q YTQ GG+RPFG S L AGWDKN G L+ DPSG Y WK ++ L++ + + + ++ + AL L ++ D + + +E+A Sbjct: 20 QIEYALNAVKNGQPSVGLRAKDGVVLATEN-VGSVLTDDQPKVEQISK---HIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALELDDGIHTALLTLRESFD-VGMNENNVEVA 209 The following BLAST results are available for this feature:
BLAST of CV884871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884871 ID=CV884871; Name=CV884871; organism=Citrus sinensis; type=EST; length=842bpback to top |