CV884870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.769e-47 Identity = 93/211 (44.08%), Postives = 144/211 (68.25%), Query Frame = 2 Query: 65 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 697 YD T+FSP+GRL+QV YA EA+ +A+G+ KDGVVL EK++TSKL++ S S EK++ IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +L+ +DPSG Y WK +I ++ Y+DDI +++A++LA+ L+KT++ T++ +E+A + Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPS-SYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEP--TAEGIEVAYI 215
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.260e-46 Identity = 94/211 (44.55%), Postives = 142/211 (67.30%), Query Frame = 2 Query: 65 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 697 YD T+FSP+GRL+QV+YA EA+ +A+G+ KDGVVL EK+VTSKL++ S EK+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +L+ +DPSG Y WK +I ++ Y+D+++ EEA++LA+ LSK M+ S S ++ + V Sbjct: 10 YDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPE-SYEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAG--VNEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDEMTLEEAIKLAVLALSKIMEEPSPESIEVAVISV 217
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.260e-46 Identity = 93/209 (44.50%), Postives = 141/209 (67.46%), Query Frame = 2 Query: 65 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELA 691 YD T+FSP+GRL+QV YA EA+ +A+G+ +GVVL EK++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ + Y EP P+ +V+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I ++ YKDD+S EEA++LA+ L+KTM+ S ++ +E+A Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPE-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAG--VNEKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTMEKPS--AENIEVA 213
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.856e-46 Identity = 92/211 (43.60%), Postives = 142/211 (67.30%), Query Frame = 2 Query: 65 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 697 YD T+FSP+GRL+QV YA EA+ +A+G+ KDGVVL EK++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ + Y EP P+ +V+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I + Y+DD++ +EA++LA+ L+KTM+ S ++ +E+A + Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPE-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAG--VNDKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKTMEKPS--AENIEVAVI 215
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.577e-46 Identity = 94/213 (44.13%), Postives = 141/213 (66.20%), Query Frame = 2 Query: 65 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFL 703 YD T+FSP+GRL+QV YA EA+ +A+G+ K GVVL EK++TS+L++ S S EK+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I ++ Y DDI E A++LA+ L+KT++ S + +E+A + L Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPS-SYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNEKPELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDDIDMEGAIKLAILALAKTLEEPS--PESIEVAYITL 217
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.465e-45 Identity = 93/194 (47.94%), Postives = 133/194 (68.56%), Query Frame = 2 Query: 65 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSK 646 YD T+FSPEGRLYQVEYA EA+ +AIGI KDGVVL ++++TSKL++ S EK+++IDDHVA A +G+++DA +LI+ AR++AQ Y Y E + +E L + +CD KQ YTQ GG+RPFGVS L AG DKN +L+ +DPSG +K +L+++Y+DDI+ +E ++LA+ L+K Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIR-SIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKNEA-RLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITALTK 200
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.914e-45 Identity = 92/211 (43.60%), Postives = 140/211 (66.35%), Query Frame = 2 Query: 65 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 697 YD T+FSP+GRL+QV YA EA+ +A+G+ K+GVVL EK++TSKL++ S S EK+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y W+ +I + Y DD+ E A++LA+ L+KT++ S + +E+A + Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPS-SYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNDKPELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLDMEGAIKLAILALAKTLEEPS--PESIEVAYI 215
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.713e-44 Identity = 91/211 (43.13%), Postives = 139/211 (65.88%), Query Frame = 2 Query: 65 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 697 YD T+FSP+GRL+QVEYA EA+ +A+GI ++GVVL +K+VTSKL++ S EK+Y+ID H+ A AG+++DA +L+ AR++AQ Y Y Y EP+ V+ LV+++CD KQ YTQ GG+RPFG + L AG D G +L+ +DPSG K + +++Y++D++ +EA++LA++ L + T+D LE+A V Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPE-SIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYEA-SREETTADNLEIAVV 217
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43 Identity = 90/211 (42.65%), Postives = 138/211 (65.40%), Query Frame = 2 Query: 65 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 697 YD T+FSP+GRL+QVEYA EA+ +AIGI K+GV+L+ +K+V SKLL+ T EK+YKID+H+ A +G+++DA +LI+ AR++AQ Y EP+ V++L + +CD KQ YTQ+GG+RPFGVS L AG D+ +LY +DPSG +K +++Y+DD+S ++A+ L L + +++S L + +E+ V Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADT-IEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDEVP--KLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDDLSFDDAMVLGLVAMGLSIES-ELVPENIEVGYV 214
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.980e-42 Identity = 93/219 (42.47%), Postives = 139/219 (63.47%), Query Frame = 2 Query: 65 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKV 721 YD TIFSPEGRLYQVEYA EA+ +A+GI KDGVVL ++++TSKL+ S S EK+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ GG RPFG++ L G D+ + +L+ +DPSG +K +L+ Y +D++ E ++LAL LSKT + L + +++A + SGK+ Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDMTVNEGMELALYALSKTTE--ELKPENIDMA--IVKDSGKL 222 The following BLAST results are available for this feature:
BLAST of CV884870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884870 ID=CV884870; Name=CV884870; organism=Citrus sinensis; type=EST; length=727bpback to top |