CV884870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.469e-37 Identity = 80/198 (40.40%), Postives = 124/198 (62.63%), Query Frame = 2 Query: 47 PKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVL 640 P+ YD T+FSP+GRLYQVEYA EA+ +A+GI + DGVVL+ +K+V+SKLL++S S EK++KID+H+ A +G++ DA L++ AR++ Q +Y E + VE L + LCD Q TQ+GG+RP+G + L AG +L+ +DPSG +K + +++Y D++ ++A+ L LK L Sbjct: 3 PQYQMGYDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESS-SIEKIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDHMQTLTQYGGIRPYGTALLIAGVSDGES-RLFETDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADLALKDAILLGLKAL 198
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA7_DICDI (Proteasome subunit alpha type-7 OS=Dictyostelium discoideum GN=psmA7 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.469e-37 Identity = 80/201 (39.80%), Postives = 123/201 (61.19%), Query Frame = 2 Query: 56 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDS 658 S RYD T+FSP+G L+QVEYAMEA+ A+G+ KD +VL EKK T+KL Q + S K+ K+DDH+ AG+ +D+ +LI+ A ++ Q Y ++ VE + + + +Q YTQ GG+RPFG+S L G+D + LY +DPSG+Y WK L+++Y D+S EE+++LA++ L + ++S Sbjct: 3 SARYDRAITVFSPDGHLFQVEYAMEAVRKGTVAVGVRGKDVIVLGVEKKATAKL-QDARSIRKIVKLDDHICLTFAGLTADSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQRYTQSGGVRPFGISTLIVGFDTDGTPNLYQTDPSGSYSSWKAAAIGRSSKSVGEFLEKNY-TDVSEEESIKLAVRALLEIVES 201
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA5_SCHPO (Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces pombe GN=SPAC323.02c PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.469e-37 Identity = 93/217 (42.86%), Postives = 133/217 (61.29%), Query Frame = 2 Query: 65 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCD--TKQGYTQFGG----LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 697 YD FSPEGRL+QVEYA+EAI +AIG+ +KD VVL EK++TS L++ S S EK+++ID H+ CA++G+ +DA +I ARVQ Q + + Y EP +E QS+CD + G + G RPFGV+ L AG D+ +G QLY S+PSG Y ++ S L +++ D++ EEA L LKVL + M+ L S ++LA+V Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME-SHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGIDE-HGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQVMEE-KLDSKNVQLAKV 221
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA7B_ARATH (Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana GN=PAD2 PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.918e-37 Identity = 80/200 (40.00%), Postives = 122/200 (61.00%), Query Frame = 2 Query: 62 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDS 658 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T KL Q S S K+ +D+H+A A AG+ +DA +LIN AR++ Q + ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D LY +DPSG + WK L+++YK+ S +E ++LA++ L + ++S Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKL-QDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKES-SGQETIKLAIRALLEVVES 200
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.505e-37 Identity = 88/213 (41.31%), Postives = 128/213 (60.09%), Query Frame = 2 Query: 53 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELA 691 M Y T FSP G+L Q+E+A++A + GSAIGI +K+GVVL+ EKK+ S L TS +K+ I +++ AG+ D+ +LI AR ++++Y Y+E +PV QLV+ L Q +TQ GG+RPFGVS L AG+D+ G LY DPSG+Y WK + L++ Y DD+ E+A+Q AL + + + T LT +ELA Sbjct: 1 MDSDYSFSLTTFSPSGKLVQIEHALQAAASGGSAIGIKAKNGVVLITEKKLHS--LVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEK-GPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDDLEIEDAIQTALITIKEGFE-TQLTEFNMELA 209
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.272e-37 Identity = 83/217 (38.25%), Postives = 131/217 (60.37%), Query Frame = 2 Query: 47 PKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 697 P + YD T+FSP+GRL+QVEYA EA+ ++IGI +G+VL +K+ TS L++ +TS EK++KID+H+ A +G+++DA L+ ARV+AQ Y EP+ V+ L + LCD Q YTQ GG+RPFG + + G +L+ +DPSG +K I + YKDD++ EA+ LAL +++ + + T++ +E+A + Sbjct: 3 PLQNAGYDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVE-ATSIEKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYTQNGGVRPFGSALIIGGVYDGI-CKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKDDMNLNEAINLALTAINEATEHET-TANNVEIAVI 216
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 4.273e-37 Identity = 75/196 (38.27%), Postives = 122/196 (62.24%), Query Frame = 2 Query: 65 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 652 YD TIFSP+G LYQV+YA EA+ + +G+ +K GVVL+GEK+ ++LL S EK++ +DDHV C+ AG+ SD ILI+ AR QA ++ Y EP+ ++ L + + D KQ YTQ GG+RPFGV+ + G D+ +L M++PSG + + +++Y++D++ ++ + L ++ L+ T+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKAGVVLIGEKRKATQLLDVD-SIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYREDLNMQDTILLGIRALASTL 204
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.273e-37 Identity = 80/200 (40.00%), Postives = 122/200 (61.00%), Query Frame = 2 Query: 62 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDS 658 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T KL Q S S K+ +D+H+A A AG+ +DA +LIN AR++ Q + ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D LY +DPSG + WK L+++YK+ + +E V+LA++ L + ++S Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKL-QDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKES-AGQETVKLAIRALLEVVES 200
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.581e-37 Identity = 83/204 (40.69%), Postives = 121/204 (59.31%), Query Frame = 2 Query: 53 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDD--ISREEAVQLALKVLSKTMDS 658 M+ RYD T+FSP+G L+QVEYA EA+ +A+GI KD VVL EKK +KL Q + K+ +D+HV A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK L+++Y D+ S +A++LA+K L + + S Sbjct: 1 MAARYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKL-QEERTVRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLEVVQS 203
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSMA_NATPD (Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=psmA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.519e-37 Identity = 90/211 (42.65%), Postives = 126/211 (59.72%), Query Frame = 2 Query: 65 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 697 YD TIFSP+GRLYQVEYA EA+ ++IGI ++DGVVLV +K++ S L++ TS EK++K DDH+ A AG ++DA LI+ AR QAQ Y EP+ VE L +++ D Q YTQ GG RPFGV+ + G + +LY +DPSG W+ L++ Y + + E + LAL+ L+ D SLT + + LA V Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRSPLMER-TSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQYTQVGGARPFGVALIIGGIEDGEP-RLYETDPSGTPYEWQALAVGADRGDIQEYLEEHYSESLDTEAGIGLALEALASVNDD-SLTPEGIGLATV 217 The following BLAST results are available for this feature:
BLAST of CV884870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884870 ID=CV884870; Name=CV884870; organism=Citrus sinensis; type=EST; length=727bpback to top |