CV884859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_PLAF7 (40S ribosomal protein S3a OS=Plasmodium falciparum (isolate 3D7) GN=MAL3P7.35 PE=3 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 3.804e-66 Identity = 124/213 (58.22%), Postives = 160/213 (75.12%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 722 +WYD+KAP F VRN GKTLVT+T G K+A++ LK R++EV+L DL+N+E+ A++KI+L + + ++ T+F G+ T DKL SL+RK +TLIE + DVKT DNY LRMFCI FTK+ NQ K TCYAQ SQI++IR+KM +IM A+A+ LK LV+KFI E IG+EIEK IYPLQNV IRKVKILK PK D+ KLME+H D E+ G Sbjct: 28 EWYDLKAPKMFLVRNFGKTLVTKTIGKKLATDSLKGRIYEVNLADLNNDEDQAHKKIKLSCDHIINRDCYTDFCGLSITRDKLCSLIRKGYTLIEGHTDVKTLDNYHLRMFCIAFTKKRQNQTKSTCYAQTSQIKKIRKKMVDIMTAEASKVLLKDLVKKFIPESIGKEIEKQCKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDPKEESG 240
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_LODEL (40S ribosomal protein S1 OS=Lodderomyces elongisporus GN=RPS1 PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 4.968e-66 Identity = 126/215 (58.60%), Postives = 167/215 (77.67%), Query Frame = 3 Query: 87 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKM 731 +YDI+APS F VGKTLV ++ GT +++ LK RVFEV+LGDL E++AYRK++LRA++VQG +LTNF GMDFT+DKLRSLVRKW +L+EA V VKT D+Y LR+F I FTKR NQVK+T YAQ+S++R++R+KM EI+ + ++ L L K I E+I REIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ SE+ G K+ Sbjct: 17 FYDIQAPSTFTNTYVGKTLVNKSAGTFSSTDALKGRVFEVNLGDL-TLEDNAYRKVKLRADEVQGNKILTNFHGMDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIAFTKRQANQVKKTTYAQSSKLREVRKKMVEILTREVSNSTLSQLTSKLIPEVISREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEASEEKGKKV 230
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_PLAYO (40S ribosomal protein S3a OS=Plasmodium yoelii yoelii GN=PY02291 PE=3 SV=2) HSP 1 Score: 248.44 bits (633), Expect = 4.206e-65 Identity = 122/213 (57.28%), Postives = 158/213 (74.18%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 722 +WYD+ AP F VR GKTLVT+T G K+A++GLK R++EV+L DL+N+E+ A++KI+L + + ++ T+F G+ T DKL SL+RK +TLIE DVKT DNY LRMFCI FTK+ PNQ K TCYAQ SQI++IR+KM +IM A+A+ LK LV+K I E IG+E+EK I+PLQNV IRKVKILK PK D+ KLME+H D ED G Sbjct: 28 EWYDLNAPKMFMVRKFGKTLVTKTIGKKLATDGLKGRIYEVNLADLNNDEDQAHKKIKLICDHIINRDCYTDFCGLSITRDKLCSLIRKGYTLIEGCTDVKTIDNYHLRMFCIAFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMHAEASKVLLKDLVKKIIPESIGKEVEKQCKKIFPLQNVLIRKVKILKRPKLDISKLMELHSDPKEDSG 240
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_DROWI (40S ribosomal protein S3a OS=Drosophila willistoni GN=RpS3A PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 9.369e-65 Identity = 129/239 (53.97%), Postives = 168/239 (70.29%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSEDV----GVKMERPA--DEPIPEA 764 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GMD TTDK RS+V+KW TLIEA V+ KT D Y LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD SE V G ++RP + P+ EA Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIINNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDISKLLELHGDGGGKTSEAVVSAEGAVVDRPEGYEPPVQEA 267
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_MONBE (40S ribosomal protein S3a OS=Monosiga brevicollis GN=34920 PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.224e-64 Identity = 124/234 (52.99%), Postives = 171/234 (73.08%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKMERPADEPIPEAPTEV 776 +WYD+KAPS F+ R VGKT V RT GTK++++GL+ RV+E+SL DL N++E +RK++L+ E++QG LTNF GM TTDKLRSLV+KW +LIEA+VDVKT D Y LR+F IGFTK+ N ++TCYAQ++Q R +R KM EIM + A+CDLK V K + IG+EI+K SI+PLQ+V+IRKVK+LK P+FD+ KL+E+HG+ + D G + + + P+ T V Sbjct: 28 EWYDVKAPSYFKKRQVGKTPVNRTAGTKLSADGLRGRVYEMSLADL-NDDESTFRKVKLQVEEIQGTECLTNFHGMSLTTDKLRSLVKKWRSLIEAFVDVKTNDGYVLRIFSIGFTKKQANSDRKTCYAQSAQKRALRAKMVEIM-QREATCDLKEFVSKLMPGTIGQEIQKKCQSIFPLQDVYIRKVKVLKKPRFDVSKLLELHGEAGGVTADKGKTVAKSGEFVEPKPQTSV 259
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_DROVI (40S ribosomal protein S3a OS=Drosophila virilis GN=RpS3A PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.224e-64 Identity = 120/209 (57.42%), Postives = 155/209 (74.16%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 704 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GMD TTDK RS+V+KW TLIEA V+ KT D Y LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTSKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGD 237
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_DROPS (40S ribosomal protein S3a OS=Drosophila pseudoobscura pseudoobscura GN=RpS3A PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.598e-64 Identity = 120/209 (57.42%), Postives = 155/209 (74.16%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 704 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GMD TTDK RS+V+KW TLIEA V+ KT D Y LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGD 237
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_DROPE (40S ribosomal protein S3a OS=Drosophila persimilis GN=RpS3A PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.598e-64 Identity = 120/209 (57.42%), Postives = 155/209 (74.16%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 704 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GMD TTDK RS+V+KW TLIEA V+ KT D Y LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGD 237
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_DROME (40S ribosomal protein S3a OS=Drosophila melanogaster GN=RpS3A PE=1 SV=3) HSP 1 Score: 246.514 bits (628), Expect = 1.598e-64 Identity = 120/209 (57.42%), Postives = 155/209 (74.16%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 704 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GMD TTDK RS+V+KW TLIEA V+ KT D Y LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGD 237
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_DROER (40S ribosomal protein S3a OS=Drosophila erecta GN=RpS3A PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.598e-64 Identity = 120/209 (57.42%), Postives = 155/209 (74.16%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 704 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GMD TTDK RS+V+KW TLIEA V+ KT D Y LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGD 237 The following BLAST results are available for this feature:
BLAST of CV884859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 201
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884859 ID=CV884859; Name=CV884859; organism=Citrus sinensis; type=EST; length=931bpback to top |