CV884859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_DROSE (40S ribosomal protein S3a OS=Drosophila sechellia GN=RpS3A PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 2.087e-64 Identity = 120/209 (57.42%), Postives = 155/209 (74.16%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 704 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GMD TTDK RS+V+KW TLIEA V+ KT D Y LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTIDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGD 237
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_DROMO (40S ribosomal protein S3a OS=Drosophila mojavensis GN=RpS3A PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 2.087e-64 Identity = 120/209 (57.42%), Postives = 155/209 (74.16%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 704 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GMD TTDK RS+V+KW TLIEA V+ KT D Y LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTFKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDISKLLELHGD 237
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_DROAN (40S ribosomal protein S3a OS=Drosophila ananassae GN=RpS3A PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 2.087e-64 Identity = 128/239 (53.56%), Postives = 167/239 (69.87%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDV-----GVKMERPA--DEPIPEA 764 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GMD TTDK RS+V+KW TLIEA V+ KT D Y LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD S D G ++RP + P+ EA Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTIDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIINNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSSDAVVSTEGAVIDRPEGYEPPVQEA 267
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_DROGR (40S ribosomal protein S3a OS=Drosophila grimshawi GN=RpS3A PE=3 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 6.073e-64 Identity = 119/209 (56.94%), Postives = 155/209 (74.16%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 704 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GMD TTDK RS+V+KW TLIEA V+ KT+D Y LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+H D Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTSDGYLLRIFCIGFTSKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGVDLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHND 237
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_PODAN (40S ribosomal protein S1 OS=Podospora anserina GN=RPS1 PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.767e-63 Identity = 119/183 (65.03%), Postives = 146/183 (79.78%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNV 632 DWY IKAP+ F +R+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+RK++LR ++VQGKN LTNF G+DFT+DKLRSLVRKW TLIEA V V+TTD+Y LR+F I FTKR PNQ+K+T YA +SQIR IR+KM EI+ +A+SC L+ L K I E+IGREIEKAT IYPLQNV Sbjct: 28 DWYGIKAPAPFAIRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVQTTDHYLLRLFAIAFTKRRPNQIKKTTYAASSQIRAIRKKMTEIIQREASSCTLQQLTSKLIPEVIGREIEKATQGIYPLQNV 210
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_TAESO (40S ribosomal protein S3a OS=Taenia solium PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.980e-58 Identity = 110/220 (50.00%), Postives = 157/220 (71.36%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKMERP 740 +WY+++APS F R +TL+TRTQGTKIASEGLK RV ++SLGDL ++ + +RK +L+ EDVQG++ LTNF GMD T DKL +V KW + IEA+VDVKTTD YTLR F I FTK+ +Q K YAQ ++I+++R K+ E++ + A CDLK +V+K I + IG++ SI+PL +RKVK+LK PK DLG+++E+H + +++ G + RP Sbjct: 28 EWYELRAPSMFSNRTCARTLITRTQGTKIASEGLKGRVIQLSLGDLSDKTQDIFRKFKLQVEDVQGRHCLTNFHGMDLTRDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVIAFTKKQEDQ-KSHAYAQTTRIKKLRAKIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDLGRILELHSEGKADEFGEGVPRP 246
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_SCHJA (40S ribosomal protein S3a OS=Schistosoma japonicum GN=SJCHGC01275 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 7.191e-57 Identity = 114/220 (51.82%), Postives = 151/220 (68.64%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKMERP 740 +WYDIKAP+ F R +TLVTRTQGT+IASE LK RV +SLGDL + E +RK +L+ EDVQG++ LTNF G++ T DKL S+V KW + IEA+VDVKTTD Y LR F I FT +P + YAQ ++I++IR ++ EI+ + ++CDLK +V K I + I ++ KA IYPL FIRKVK+LK PK DL +LME+HG+ S G + RP Sbjct: 29 EWYDIKAPAMFPKRTCARTLVTRTQGTRIASEALKGRVVTLSLGDLSEKNEEVFRKFKLQIEDVQGRHCLTNFHGLELTRDKLCSVVVKWRSTIEAHVDVKTTDGYLLRFFIITFTPSVPRSERLHSYAQTTRIKRIRARLVEIIQQEVSTCDLKEVVNKLIPDSIAQDARKAASWIYPLGETFIRKVKVLKRPKADLARLMELHGESKSTAPGETVSRP 248
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_DICDI (40S ribosomal protein S3a OS=Dictyostelium discoideum GN=rps3a PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.946e-55 Identity = 117/243 (48.15%), Postives = 160/243 (65.84%), Query Frame = 3 Query: 84 DWYDIKAPSCF----RVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFI--------------AEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-------SEDVGVKMER 737 +WY ++AP+ F VG T V RTQGTK+AS+GLK RV+EVSL D+ ++E +RKI+LRAE+V+G+NVLTNF+GMD T+DKLRSL+ KW TLIE +VDVKTTD Y LR+F I FTK+ +Q K+T YA+ S+++ IR+KM +I+ +S DLK +V+ I A + +I SI+P+ NVFIRKVK+LK PK D KL E++ +E+VG +ER Sbjct: 23 EWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMKDDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELYASSATSTIAPTEEVGTAVER 265
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_TETTH (40S ribosomal protein S3a OS=Tetrahymena thermophila GN=TTHERM_00047480 PE=3 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 5.165e-47 Identity = 95/209 (45.45%), Postives = 138/209 (66.03%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLH-NEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRL---PNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 698 +WYD +AP F ++ GKTLVT++ G +IASE +K RV E +L DL N + A+RK++L ++V G+N T+F+G+D T D+L S++RKW TLIEA VD KT D Y +R+F + FTK+ TCYA++SQ+R IRRK+ + +AA + + I E ++IEK T +I+PLQN+ IRKVK+LK PK D K+ E++ Sbjct: 30 EWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLKDNSNDKAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLDATKIAELY 238
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_LEIMA (40S ribosomal protein S3a OS=Leishmania major GN=LmjF35.0400 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.399e-44 Identity = 89/230 (38.70%), Postives = 139/230 (60.43%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEPIPEAP 767 +WYD+ AP+ F R KT+ +TQGT+IA++ L+ RVFE +L DL+ EE AYRK+R ++VQG+N+LT F M+ TTDK+ SL+RKW T +E V+VKT D YT+R+F + FTK NQ R CYA+ ++ +R ++ +++ + + +K V ++ + + I PL+ + IRKV++++ PKFD L+ HG V +R +E + AP Sbjct: 29 EWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAHGTIPASVEAD-QREVEEAVEAAP 257 The following BLAST results are available for this feature:
BLAST of CV884859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 201
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884859 ID=CV884859; Name=CV884859; organism=Citrus sinensis; type=EST; length=931bpback to top |