CV884859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A2_LEIIN (40S ribosomal protein S3a-2 OS=Leishmania infantum GN=LinJ35.0510 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.399e-44 Identity = 89/230 (38.70%), Postives = 139/230 (60.43%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEPIPEAP 767 +WYD+ AP+ F R KT+ +TQGT+IA++ L+ RVFE +L DL+ EE AYRK+R ++VQG+N+LT F M+ TTDK+ SL+RKW T +E V+VKT D YT+R+F + FTK NQ R CYA+ ++ +R ++ +++ + + +K V ++ + + I PL+ + IRKV++++ PKFD L+ HG V +R +E + AP Sbjct: 29 EWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAHGTIPASVEAD-QREVEEAVEAAP 257
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A1_LEIIN (40S ribosomal protein S3a-1 OS=Leishmania infantum GN=LinJ35.0500 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.399e-44 Identity = 89/230 (38.70%), Postives = 139/230 (60.43%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEPIPEAP 767 +WYD+ AP+ F R KT+ +TQGT+IA++ L+ RVFE +L DL+ EE AYRK+R ++VQG+N+LT F M+ TTDK+ SL+RKW T +E V+VKT D YT+R+F + FTK NQ R CYA+ ++ +R ++ +++ + + +K V ++ + + I PL+ + IRKV++++ PKFD L+ HG V +R +E + AP Sbjct: 29 EWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAHGTIPASVEAD-QREVEEAVEAAP 257
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_LEIBR (40S ribosomal protein S3a OS=Leishmania braziliensis GN=LbrM34_V2.0430 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 4.093e-44 Identity = 89/230 (38.70%), Postives = 138/230 (60.00%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEPIPEAP 767 +WYD+ APS F R KT+ +TQGT+IA++ L+ RVFE +L DL+ EE AYRK+R ++VQG+N+LT F M+ TTDK+ SL+RKW T +E V+V+T D YT+R+F + FTK NQ R CYA+ ++ +R ++ +++ + + +K V ++ + + I PL+ + IRKV++++ PKFD L+ HG V R +E + AP Sbjct: 29 EWYDVVAPSNFEKRQFSKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEMTTDKMASLLRKWCTTMETTVEVRTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRVTKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPIVPLREMRIRKVRVVRTPKFDAQALLNAHGTIPTSVEAD-PREVEEAVEAAP 257
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A2_TRYCR (40S ribosomal protein S3a-2 OS=Trypanosoma cruzi GN=Tc00.1047053511001.9 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 3.465e-43 Identity = 88/232 (37.93%), Postives = 142/232 (61.21%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY---SEDVGVKMERPADEPIPEA 764 +WYD+ AP F VR GKT+ +TQGTKIA++ L+ RV+E +L DL+ + + AYRK++ ++VQG+N+LT F M+ T+D++ L+RKW T IEA V+ KT D YTLR+F I FTK+ NQ+ + CYA+ ++ +R ++ ++ + + ++ V I+ + K I PL+++ IRKVK+++ P+FD L+ HG+ +E +E + P EA Sbjct: 28 EWYDVVAPKNFEVRQFGKTICNKTQGTKIAADYLRGRVYESNLADLNKTQGDDDAYRKVKFVVQEVQGRNLLTQFHSMEMTSDRVYFLLRKWCTTIEAAVEAKTADGYTLRLFVIAFTKKQSNQLSKNCYAKTRLVKWVRHRITNLIRQRLSKVNINEAVTLLTRNILRDRLAKRCNPIVPLRDLRIRKVKVVRTPRFDAQALLNAHGEIPASAEGEARVVEEAQEAPAAEA 259
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A1_TRYCR (40S ribosomal protein S3a-1 OS=Trypanosoma cruzi GN=Tc00.1047053503635.59 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 3.465e-43 Identity = 88/232 (37.93%), Postives = 142/232 (61.21%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY---SEDVGVKMERPADEPIPEA 764 +WYD+ AP F VR GKT+ +TQGTKIA++ L+ RV+E +L DL+ + + AYRK++ ++VQG+N+LT F M+ T+D++ L+RKW T IEA V+ KT D YTLR+F I FTK+ NQ+ + CYA+ ++ +R ++ ++ + + ++ V I+ + K I PL+++ IRKVK+++ P+FD L+ HG+ +E +E + P EA Sbjct: 28 EWYDVVAPKNFEVRQFGKTICNKTQGTKIAADYLRGRVYESNLADLNKTQGDDDAYRKVKFVVQEVQGRNLLTQFHSMEMTSDRVYFLLRKWCTTIEAAVETKTADGYTLRLFVIAFTKKQSNQLSKNCYAKTRLVKWVRHRITNLIRQRLSKVNINEAVTLLTRNILRDRLAKRCNPIVPLRDLRIRKVKVVRTPRFDAQALLNAHGEIPASAEGEARVVEEAQEAPAAEA 259
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_NOSCE (40S ribosomal protein S1 OS=Nosema ceranae (strain BRL01) GN=RPS1 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.107e-32 Identity = 78/208 (37.50%), Postives = 122/208 (58.65%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLH-NEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 704 +WY++KAP+ F GKT+VT++ + + L R F+++ DL N EEHA RK R +V+GK+ + F GM T+DK++ ++RKWHTLIEA D+ D LR+F TK+ P + Y + S+ ++IR+ M +++ + DL +++K AE+IG+ +EK IYPLQN + KVK +K K D ME+ + Sbjct: 30 EWYNLKAPAIFPNNVCGKTMVTKSSNKQNLALLLIGRKFDINQADLTGNLEEHA-RKFSFRVNEVRGKDCIGVFDGMHMTSDKVKGIIRKWHTLIEAEKDIVAKDGTILRVFVNAVTKKTPTCTSKRVYCKTSEEKKIRKVMFDVIEEELKGEDLNKIMKKLAAEVIGKSVEKKGSLIYPLQNCCVIKVKTVKRGK-DTSNAMEIEAN 235
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_GIALA (40S ribosomal protein S3a OS=Giardia lamblia GN=GL50803_16265 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.278e-29 Identity = 72/207 (34.78%), Postives = 118/207 (57.00%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHN--EEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 698 +WY + AP+ F+ R++G+T VT+T G ++A++ + HRV+EV+LGDL+ E+ + K L+ + V LTNF GMD T K SL RK I+ ++D+ TTD Y LR+F I FT R Q ++ C+ + IR +R + E + + + LV K + ++ +A I ++V IR+VK++K P+ + L +H Sbjct: 26 EWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPRNTMELLSTMH 232
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_ENCCU (40S ribosomal protein S1 OS=Encephalitozoon cuniculi GN=RPS1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.546e-27 Identity = 56/157 (35.67%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 192 RVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKA 662 R ++V+ DL + +RK + D++G + F GM+ T+DK +++++KWHTLIEA D+ D R+F +G T+R P VK+TCY + S ++IR+ M +++ + + CD++ +++K E +G+ IE+ I+PLQN +RKVK +K+ Sbjct: 16 RRYDVNQADLTGNNDVGHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIKS 172
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_GUITH (40S ribosomal protein S3a OS=Guillardia theta PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.494e-25 Identity = 59/188 (31.38%), Postives = 106/188 (56.38%), Query Frame = 3 Query: 96 IKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILK 659 + AP F + +GKTL+ + + + +++++VSL D+ +EE + ++ + T F G+ T DK+ SL++KWHTLIE V+ KT D Y L++F I +K+ N +T Y +SQ R +RR++ +I+I + + D+K + + + I +IE I+P+ V IRK+K+++ Sbjct: 29 VYAPDIFDSKLIGKTLIKKRNPAD-ENSSVDNKIYQVSLADILGKEEFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_METTP (30S ribosomal protein S3Ae OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.788e-23 Identity = 70/193 (36.27%), Postives = 105/193 (54.40%), Query Frame = 3 Query: 87 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAP 665 WY + AP F VG+TL L RV E +LGDL N K+R + + V G T F G + TTD +RSLV++ + I+A VDV T+D Y +R+ FT VKR A+A+Q++ IR R+++I++A + DL GL+++ + + +I K ++YPL+ V IRK +IL P Sbjct: 17 WYKVLAPEMFGRTPVGETLANDPNK-------LLGRVIETTLGDLTNNFSKQNTKLRFKIDAVAGDTAYTKFIGHEMTTDYIRSLVKRRTSRIDAVVDVTTSDGYLVRVKPSCFT------VKR---ARANQVKAIREISRQVIISRAGNIDLNGLIQEVVLGKLSLDIYKDAKAVYPLRRVEIRKTEILAGP 193 The following BLAST results are available for this feature:
BLAST of CV884859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 201
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884859 ID=CV884859; Name=CV884859; organism=Citrus sinensis; type=EST; length=931bpback to top |