CV884859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_PYRFU (30S ribosomal protein S3Ae OS=Pyrococcus furiosus GN=rps3Ae PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.953e-18 Identity = 64/194 (32.99%), Postives = 94/194 (48.45%), Query Frame = 3 Query: 87 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPK 668 WY I AP F VG T E + +RV EV+L D+ + ++ K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D Y LR+ + R Q SQ R IR+ M+EI+ +A + K V + + I EI K IYPL+ IRK+K+L+ P+ Sbjct: 18 WYIIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDVTGDFTKSHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMAMAIAMR---------RIQTSQERAIRKIMQEIIYKKAEELNFKDFVLESVNGKIAAEIAKEAKKIYPLRKAEIRKIKVLEEPQ 195
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_ARCFU (30S ribosomal protein S3Ae OS=Archaeoglobus fulgidus GN=rps3Ae PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.038e-18 Identity = 60/195 (30.77%), Postives = 98/195 (50.26%), Query Frame = 3 Query: 87 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAP 665 W+ + AP F + +G+T +K+ R E +L +L N+ ++ Y+K+ + V G N T FW + T + L SL R+ + IE VDV T D Y LR+ + FT R + SQ R IR MR+I++ +A+S + +++ + + EI K IYP++ V IRK+++L P Sbjct: 19 WFTLIAPEYFGMAELGET--PADDASKVVG-----RTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVR---------RCKTSQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELLAEP 197
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_PYRHO (30S ribosomal protein S3Ae OS=Pyrococcus horikoshii GN=rps3Ae PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.593e-18 Identity = 64/194 (32.99%), Postives = 92/194 (47.42%), Query Frame = 3 Query: 87 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPK 668 WY I AP F VG T E + +RV EV+L D+ + + K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D Y LR+ + R Q SQ R IR+ M+EI+ +A + K V + + I EI K IYPL+ IRK+K+L P+ Sbjct: 20 WYIIYAPDFFGGVEVGLTPADDP-------EKVMNRVVEVTLKDITGDFTKGHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYRLRVMAMAIAMR---------RIQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEGKKIYPLKKAEIRKIKVLGEPE 197
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_METBF (30S ribosomal protein S3Ae OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.914e-17 Identity = 63/198 (31.82%), Postives = 100/198 (50.51%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCY----AQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAP 665 +WY+I+AP+ VG T+ G G R E ++G+L N+ K+ LR +V G T+ G + TTD +RS+V++ + I+A +DVKT D Y +R VK TC+ A++SQI+ IR M I+ +A+ D + +++ I + I + IYPL+ V IRK ++ AP Sbjct: 17 EWYNIEAPAYLNRAIVGNTMA----GDPSLLVG---RNIETTVGELTNDMTKNNTKVILRINNVVGDVATTDLMGHELTTDYIRSIVKRQTSRIDANIDVKTKDGYIIR-------------VKPTCFTIKRARSSQIKAIREMMVNIVAKRASEADFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAAP 194
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_PYRAB (30S ribosomal protein S3Ae OS=Pyrococcus abyssi GN=rps3Ae PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.500e-17 Identity = 64/194 (32.99%), Postives = 92/194 (47.42%), Query Frame = 3 Query: 87 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPK 668 WY I AP F VG T E + +RV EV+L D+ + + K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D Y LR+ + R Q SQ R IR+ M+EI+ +A + K V + + I EI K IYPL+ IRK+K+L P+ Sbjct: 19 WYVIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDITGDFLKGHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAMVIAAR---------RIQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEAKKIYPLKKAEIRKIKVLGEPE 196
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_METKA (30S ribosomal protein S3Ae OS=Methanopyrus kandleri GN=rps3Ae PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.274e-17 Identity = 61/197 (30.96%), Postives = 97/197 (49.24%), Query Frame = 3 Query: 87 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIA----EIIGREIEKATLSIYPLQNVFIRKVKILKAP 665 WY I AP F VG+T E + RV E +LGD+ ++ + K+ R DV+G + F G D +RSLVR+ + I+ +DV T D Y +R+ + FT R A+ SQ R IR++M +++ A CD + + ++ E I +I++A IYP++ IRK ++L+ P Sbjct: 11 WYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHHIKVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFTTR---------RAKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEVLEEP 191
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_METAC (30S ribosomal protein S3Ae OS=Methanosarcina acetivorans GN=rps3Ae PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 9.501e-17 Identity = 64/198 (32.32%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCY----AQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAP 665 +WY+I+AP VG T+ G G R E ++G+L N+ K+ LR +V G T+ G + TTD +RS+V++ + I+A VDVKT D Y +R VK TC+ A++SQ++ IR M EI+ +AA D + +++ I + I + IYPL+ V IRK ++ P Sbjct: 17 EWYNIEAPVYLNRAIVGNTMA----GDPSLLVG---RNVETTVGELTNDMTKNNTKVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDGYVIR-------------VKPTCFTIKRARSSQMQAIREMMVEIVKKRAAESDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTEVETIP 194
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_DESK1 (30S ribosomal protein S3Ae OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.621e-16 Identity = 58/193 (30.05%), Postives = 90/193 (46.63%), Query Frame = 3 Query: 87 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAP 665 WY++ AP+ F +G T E L RV E +L D+ + + K+ + + G LT F G + D +RSLVR+ + I+ D+ T D Y LR+ + T N SQ + IRR MRE + +A+ L LV++ ++ I EI + IYP++ V + K K+L P Sbjct: 18 WYEVVAPTSFGGITLGSTPADDP-------EKLIGRVIETTLYDITGDITQVHVKLYFQIISIDGNKALTRFKGHELARDYMRSLVRRKSSKIQGIFDINTKDGYVLRVTIVALTSYRCN---------TSQKKAIRRVMREYIFKKASELTLDELVQEIMSYKISNEIAELARKIYPIRRVEVYKTKLLLIP 194
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_ENTBH (40S ribosomal protein S1 OS=Enterocytozoon bieneusi (strain H348) GN=RPS1 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.372e-15 Identity = 58/187 (31.02%), Postives = 98/187 (52.41%), Query Frame = 3 Query: 114 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEE----HAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRL-PNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILK 659 F + N G T + + + + L R F V+ GDL + ++ R + + V G N + F GM+ + +K+ ++RKWHTLIEA + + T D T R+F TK+ P+ +K YA+AS+I+ IR+++ E + +++ LV+ E + +E E IYP+ + I KVK +K Sbjct: 41 FPITNHGTTSHPKMRSKQDLTPFLVGRTFSVNQGDLECADPMNAVNSPRYFKFKVNAVCGNNCNSVFNGMEVSREKITGMIRKWHTLIEANIPITTKDGSTWRVFVNAVTKKKNPDSLKH--YAKASEIKIIRKRIVETTLEHLDGIEVEKLVKVLSTEGLAKEFETRCNEIYPIFAMII-KVKPIK 224
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_THESM (30S ribosomal protein S3Ae OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.056e-15 Identity = 57/195 (29.23%), Postives = 89/195 (45.64%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPK 668 DWY + AP F +G T E +K R+ E +L D+ + + K+ R DV+G+N T F G +RSLVR+ T I+ +V T D Y LR+ + R Q+SQ R +R M +++ +A V + + +G E+ + IYPL+ IRK+K+L P+ Sbjct: 21 DWYIVYAPEFFGNVEIGLTPADEP-------EKVKGRIIETTLRDVTGDFTKGHVKLYFRIHDVKGQNAYTKFKGHKLARSYIRSLVRRRTTRIDGIFNVTTKDGYKLRVMGMVIAIR---------RIQSSQERAVREVMEDLIRKKAEELTFTEFVLEAVNGKMGAELAREAKKIYPLKRAEIRKIKVLAEPE 199 The following BLAST results are available for this feature:
BLAST of CV884859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 201
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884859 ID=CV884859; Name=CV884859; organism=Citrus sinensis; type=EST; length=931bpback to top |